RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 AKNAQ7Z591 1439 aa13.37□□□□□ -0.27
TRIM43CP-201ENST00000422468 LOC105371045A0A1W2PR82 267 aa13.36□□□□□ -0.27
TRIM43CP-201ENST00000422468 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
TRIM43CP-201ENST00000422468 MYO5CQ9NQX4 1742 aa13.36□□□□□ -0.27
TRIM43CP-201ENST00000422468 DENND4BO75064 1496 aaPredicted RBP13.36□□□□□ -0.27
TRIM43CP-201ENST00000422468 PCF11O94913 1555 aaKnown RBP13.35□□□□□ -0.27
TRIM43CP-201ENST00000422468 KIF14Q15058 1648 aa13.34□□□□□ -0.27
TRIM43CP-201ENST00000422468 PLCH2O75038 1416 aa13.33□□□□□ -0.28
TRIM43CP-201ENST00000422468 TROQ12816 1431 aaPredicted RBP13.32□□□□□ -0.28
TRIM43CP-201ENST00000422468 CASKIN1Q8WXD9 1431 aa13.32□□□□□ -0.28
TRIM43CP-201ENST00000422468 ARHGEF40Q8TER5 1519 aa13.32□□□□□ -0.28
TRIM43CP-201ENST00000422468 CLIP1P30622 1438 aa13.31□□□□□ -0.28
TRIM43CP-201ENST00000422468 ZMYM4Q5VZL5 1548 aa13.31□□□□□ -0.28
TRIM43CP-201ENST00000422468 ADAMTSL3P82987 1691 aa13.31□□□□□ -0.28
TRIM43CP-201ENST00000422468 CCDC18Q5T9S5 1454 aa13.3□□□□□ -0.28
TRIM43CP-201ENST00000422468 BCORL1Q5H9F3 1711 aa13.3□□□□□ -0.28
TRIM43CP-201ENST00000422468 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
TRIM43CP-201ENST00000422468 EFCAB2Q5VUJ9 269 aa13.28□□□□□ -0.28
TRIM43CP-201ENST00000422468 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
TRIM43CP-201ENST00000422468 SCAPERQ9BY12 1400 aa13.28□□□□□ -0.28
TRIM43CP-201ENST00000422468 MAGI2Q86UL8 1455 aa13.28□□□□□ -0.28
TRIM43CP-201ENST00000422468 CEP162Q5TB80 1403 aa13.27□□□□□ -0.29
TRIM43CP-201ENST00000422468 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
TRIM43CP-201ENST00000422468 ZFYVE16Q7Z3T8 1539 aa13.27□□□□□ -0.29
TRIM43CP-201ENST00000422468 HECW2Q9P2P5 1572 aa13.27□□□□□ -0.29
TRIM43CP-201ENST00000422468 CDC42BPBQ9Y5S2 1711 aa13.27□□□□□ -0.29
TRIM43CP-201ENST00000422468 ARHGAP5Q13017 1502 aa13.26□□□□□ -0.29
TRIM43CP-201ENST00000422468 ARID4BQ4LE39 1312 aaPredicted RBP13.26□□□□□ -0.29
TRIM43CP-201ENST00000422468 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
TRIM43CP-201ENST00000422468 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
TRIM43CP-201ENST00000422468 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
TRIM43CP-201ENST00000422468 PTPRMP28827 1452 aa13.24□□□□□ -0.29
TRIM43CP-201ENST00000422468 YEATS2Q9ULM3 1422 aa13.24□□□□□ -0.29
TRIM43CP-201ENST00000422468 SIGLEC1Q9BZZ2 1709 aa13.23□□□□□ -0.29
TRIM43CP-201ENST00000422468 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
TRIM43CP-201ENST00000422468 ZNF518AQ6AHZ1 1483 aa13.22□□□□□ -0.29
TRIM43CP-201ENST00000422468 RIMS1Q86UR5 1692 aaKnown RBP13.21□□□□□ -0.3
TRIM43CP-201ENST00000422468 KDM5CP41229 1560 aa13.2□□□□□ -0.3
TRIM43CP-201ENST00000422468 ITSN2Q9NZM3 1697 aa13.19□□□□□ -0.3
TRIM43CP-201ENST00000422468 ATP10AO60312 1499 aa13.19□□□□□ -0.3
TRIM43CP-201ENST00000422468 ABCC1P33527 1531 aa13.18□□□□□ -0.3
TRIM43CP-201ENST00000422468 FER1L4A9Z1Z3 1794 aa13.17□□□□□ -0.3
TRIM43CP-201ENST00000422468 C9orf84Q5VXU9 1444 aa13.17□□□□□ -0.3
TRIM43CP-201ENST00000422468 AFAP1Q8N556 730 aa13.17□□□□□ -0.3
TRIM43CP-201ENST00000422468 ARHGEF12Q9NZN5 1544 aa13.15□□□□□ -0.3
TRIM43CP-201ENST00000422468 ILDR1Q86SU0 546 aaPredicted RBP13.15□□□□□ -0.3
TRIM43CP-201ENST00000422468 MLH3Q9UHC1 1453 aa13.15□□□□□ -0.3
TRIM43CP-201ENST00000422468 DIP2CQ9Y2E4 1556 aa13.15□□□□□ -0.3
TRIM43CP-201ENST00000422468 GPATCH8Q9UKJ3 1502 aaKnown RBP13.14□□□□□ -0.31
TRIM43CP-201ENST00000422468 REREQ9P2R6 1566 aa13.14□□□□□ -0.31
TRIM43CP-201ENST00000422468 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
TRIM43CP-201ENST00000422468 ABCA6Q8N139 1617 aa13.13□□□□□ -0.31
TRIM43CP-201ENST00000422468 SAMD9LQ8IVG5 1584 aa13.13□□□□□ -0.31
TRIM43CP-201ENST00000422468 MTUS2Q5JR59 1369 aa13.13□□□□□ -0.31
TRIM43CP-201ENST00000422468 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
TRIM43CP-201ENST00000422468 MLECQ14165 292 aa13.12□□□□□ -0.31
TRIM43CP-201ENST00000422468 KIDINS220Q9ULH0 1771 aa13.12□□□□□ -0.31
TRIM43CP-201ENST00000422468 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
TRIM43CP-201ENST00000422468 LMTK3Q96Q04 1460 aa13.1□□□□□ -0.31
TRIM43CP-201ENST00000422468 CCNB3Q8WWL7 1395 aa13.1□□□□□ -0.31
TRIM43CP-201ENST00000422468 ZNF777Q9ULD5 760 aaPredicted RBP13.1□□□□□ -0.31
TRIM43CP-201ENST00000422468 SYCP2Q9BX26 1530 aa13.09□□□□□ -0.31
TRIM43CP-201ENST00000422468 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
TRIM43CP-201ENST00000422468 PLEKHH2Q8IVE3 1493 aa13.09□□□□□ -0.31
TRIM43CP-201ENST00000422468 TIAM1Q13009 1591 aa13.08□□□□□ -0.32
TRIM43CP-201ENST00000422468 VPS8Q8N3P4 1428 aa13.08□□□□□ -0.32
TRIM43CP-201ENST00000422468 KIAA1107Q9UPP5 1409 aa13.08□□□□□ -0.32
TRIM43CP-201ENST00000422468 CFDP1Q9UEE9 299 aaPredicted RBP13.08□□□□□ -0.32
TRIM43CP-201ENST00000422468 AGLP35573 1532 aa13.08□□□□□ -0.32
TRIM43CP-201ENST00000422468 HNRNPMP52272 730 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIM43CP-201ENST00000422468 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
TRIM43CP-201ENST00000422468 INO80Q9ULG1 1556 aaPredicted RBP13.05□□□□□ -0.32
TRIM43CP-201ENST00000422468 SPAG9O60271 1321 aaKnown RBP13.05□□□□□ -0.32
TRIM43CP-201ENST00000422468 PREX1Q8TCU6 1659 aa13.05□□□□□ -0.32
TRIM43CP-201ENST00000422468 ATP7AQ04656 1500 aa13.04□□□□□ -0.32
TRIM43CP-201ENST00000422468 KANK4Q5T7N3 995 aaPredicted RBP13.03□□□□□ -0.32
TRIM43CP-201ENST00000422468 SETD1BQ9UPS6 1966 aaKnown RBP13.03□□□□□ -0.32
TRIM43CP-201ENST00000422468 C3P01024 1663 aa13.02□□□□□ -0.32
TRIM43CP-201ENST00000422468 CEBPAP49715 358 aaPredicted RBP13.01□□□□□ -0.33
TRIM43CP-201ENST00000422468 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
TRIM43CP-201ENST00000422468 NCOA2Q15596 1464 aa13.01□□□□□ -0.33
TRIM43CP-201ENST00000422468 ADGBQ8N7X0 1667 aa13.01□□□□□ -0.33
TRIM43CP-201ENST00000422468 PLXNC1O60486 1568 aa13□□□□□ -0.33
TRIM43CP-201ENST00000422468 MBD5Q9P267 1494 aa13□□□□□ -0.33
TRIM43CP-201ENST00000422468 HSPA2P54652 639 aa13□□□□□ -0.33
TRIM43CP-201ENST00000422468 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
TRIM43CP-201ENST00000422468 CNTLNQ9NXG0 1405 aa12.99□□□□□ -0.33
TRIM43CP-201ENST00000422468 ESF1Q9H501 851 aaKnown RBP12.99□□□□□ -0.33
TRIM43CP-201ENST00000422468 A2MP01023 1474 aa12.98□□□□□ -0.33
TRIM43CP-201ENST00000422468 LRRC9Q6ZRR7 1453 aa12.98□□□□□ -0.33
TRIM43CP-201ENST00000422468 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
TRIM43CP-201ENST00000422468 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
TRIM43CP-201ENST00000422468 RTEL1-TNFRSF6BF6WH68 1400 aa12.96□□□□□ -0.33
TRIM43CP-201ENST00000422468 UHRF1BP1Q6BDS2 1440 aa12.96□□□□□ -0.34
TRIM43CP-201ENST00000422468 CCDC141Q6ZP82 1450 aa12.95□□□□□ -0.34
TRIM43CP-201ENST00000422468 CLTCQ00610 1675 aaKnown RBP12.95□□□□□ -0.34
TRIM43CP-201ENST00000422468 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
TRIM43CP-201ENST00000422468 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
TRIM43CP-201ENST00000422468 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
TRIM43CP-201ENST00000422468 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms