RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 ARID4BQ4LE39 1312 aaPredicted RBP41.24■■■■■ 4.19
SMDT1-202ENST00000422252 ARHGAP5Q13017 1502 aa41.23■■■■■ 4.19
SMDT1-202ENST00000422252 ADAMTSL3P82987 1691 aa41.22■■■■■ 4.19
SMDT1-202ENST00000422252 MAGI2Q86UL8 1455 aa41.21■■■■■ 4.19
SMDT1-202ENST00000422252 ZFYVE16Q7Z3T8 1539 aa41.21■■■■■ 4.19
SMDT1-202ENST00000422252 BCORL1Q5H9F3 1711 aa41.18■■■■■ 4.18
SMDT1-202ENST00000422252 YEATS2Q9ULM3 1422 aa41.18■■■■■ 4.18
SMDT1-202ENST00000422252 CDC42BPBQ9Y5S2 1711 aa41.11■■■■■ 4.17
SMDT1-202ENST00000422252 PTPRMP28827 1452 aa41.09■■■■■ 4.17
SMDT1-202ENST00000422252 HECW2Q9P2P5 1572 aa41.09■■■■■ 4.17
SMDT1-202ENST00000422252 PREX2Q70Z35 1606 aa41.09■■■■■ 4.17
SMDT1-202ENST00000422252 ZNF518AQ6AHZ1 1483 aa41.08■■■■■ 4.17
SMDT1-202ENST00000422252 CEP162Q5TB80 1403 aa41.07■■■■■ 4.16
SMDT1-202ENST00000422252 MADDQ8WXG6 1647 aa41.06■■■■■ 4.16
SMDT1-202ENST00000422252 AFAP1Q8N556 730 aa41.01■■■■■ 4.16
SMDT1-202ENST00000422252 SIGLEC1Q9BZZ2 1709 aa41.01■■■■■ 4.16
SMDT1-202ENST00000422252 KDM5CP41229 1560 aa40.99■■■■■ 4.15
SMDT1-202ENST00000422252 ATP10AO60312 1499 aa40.99■■■■■ 4.15
SMDT1-202ENST00000422252 CDC42BPAQ5VT25 1732 aa40.98■■■■■ 4.15
SMDT1-202ENST00000422252 C9orf84Q5VXU9 1444 aa40.95■■■■■ 4.15
SMDT1-202ENST00000422252 ABCC1P33527 1531 aa40.95■■■■■ 4.15
SMDT1-202ENST00000422252 ARHGEF12Q9NZN5 1544 aa40.92■■■■■ 4.14
SMDT1-202ENST00000422252 RIMS1Q86UR5 1692 aaKnown RBP40.91■■■■■ 4.14
SMDT1-202ENST00000422252 MTUS2Q5JR59 1369 aa40.9■■■■■ 4.14
SMDT1-202ENST00000422252 GPATCH8Q9UKJ3 1502 aaKnown RBP40.89■■■■■ 4.14
SMDT1-202ENST00000422252 ITSN2Q9NZM3 1697 aa40.88■■■■■ 4.14
SMDT1-202ENST00000422252 TRAPPC8Q9Y2L5 1435 aa40.88■■■■■ 4.13
SMDT1-202ENST00000422252 MYT1LQ9UL68 1186 aa40.88■■■■■ 4.13
SMDT1-202ENST00000422252 MLECQ14165 292 aa40.87■■■■■ 4.13
SMDT1-202ENST00000422252 MLH3Q9UHC1 1453 aa40.85■■■■■ 4.13
SMDT1-202ENST00000422252 LOC105371045A0A1W2PR82 267 aa40.84■■■■■ 4.13
SMDT1-202ENST00000422252 ZNF777Q9ULD5 760 aaPredicted RBP40.83■■■■■ 4.13
SMDT1-202ENST00000422252 CCNB3Q8WWL7 1395 aa40.81■■■■■ 4.12
SMDT1-202ENST00000422252 DIP2CQ9Y2E4 1556 aa40.81■■■■■ 4.12
SMDT1-202ENST00000422252 SAMD9LQ8IVG5 1584 aa40.8■■■■■ 4.12
SMDT1-202ENST00000422252 EHBP1L1Q8N3D4 1523 aa40.78■■■■■ 4.12
SMDT1-202ENST00000422252 ABCA6Q8N139 1617 aa40.76■■■■■ 4.12
SMDT1-202ENST00000422252 CFDP1Q9UEE9 299 aaPredicted RBP40.76■■■■■ 4.12
SMDT1-202ENST00000422252 FER1L4A9Z1Z3 1794 aa40.76■■■■■ 4.12
SMDT1-202ENST00000422252 REREQ9P2R6 1566 aa40.74■■■■■ 4.11
SMDT1-202ENST00000422252 SYCP2Q9BX26 1530 aa40.73■■■■■ 4.11
SMDT1-202ENST00000422252 PLPPR3Q6T4P5 718 aa40.7■■■■■ 4.11
SMDT1-202ENST00000422252 KIAA1107Q9UPP5 1409 aa40.69■■■■■ 4.1
SMDT1-202ENST00000422252 PLEKHH2Q8IVE3 1493 aa40.69■■■■■ 4.1
SMDT1-202ENST00000422252 KIDINS220Q9ULH0 1771 aa40.69■■■■■ 4.1
SMDT1-202ENST00000422252 HNRNPMP52272 730 aaKnown RBP eCLIP40.68■■■■■ 4.1
SMDT1-202ENST00000422252 TIAM1Q13009 1591 aa40.66■■■■■ 4.1
SMDT1-202ENST00000422252 LMTK3Q96Q04 1460 aa40.64■■■■■ 4.1
SMDT1-202ENST00000422252 VPS8Q8N3P4 1428 aa40.63■■■■■ 4.09
SMDT1-202ENST00000422252 AGLP35573 1532 aa40.62■■■■■ 4.09
SMDT1-202ENST00000422252 SPAG9O60271 1321 aaKnown RBP40.61■■■■■ 4.09
SMDT1-202ENST00000422252 SUPT6HQ7KZ85 1726 aaKnown RBP40.53■■■■■ 4.08
SMDT1-202ENST00000422252 NCOA2Q15596 1464 aa40.53■■■■■ 4.08
SMDT1-202ENST00000422252 ZNF644Q9H582 1327 aaPredicted RBP40.53■■■■■ 4.08
SMDT1-202ENST00000422252 ATP7AQ04656 1500 aa40.52■■■■■ 4.08
SMDT1-202ENST00000422252 INO80Q9ULG1 1556 aaPredicted RBP40.49■■■■■ 4.07
SMDT1-202ENST00000422252 CEBPAP49715 358 aaPredicted RBP40.48■■■■■ 4.07
SMDT1-202ENST00000422252 MBD5Q9P267 1494 aa40.45■■■■■ 4.07
SMDT1-202ENST00000422252 ESF1Q9H501 851 aaKnown RBP40.43■■■■■ 4.06
SMDT1-202ENST00000422252 LRRC9Q6ZRR7 1453 aa40.43■■■■■ 4.06
SMDT1-202ENST00000422252 HSPA2P54652 639 aa40.42■■■■■ 4.06
SMDT1-202ENST00000422252 A2MP01023 1474 aa40.38■■■■■ 4.05
SMDT1-202ENST00000422252 MAP3K1Q13233 1512 aa40.37■■■■■ 4.05
SMDT1-202ENST00000422252 PLXNC1O60486 1568 aa40.35■■■■■ 4.05
SMDT1-202ENST00000422252 PREX1Q8TCU6 1659 aa40.35■■■■■ 4.05
SMDT1-202ENST00000422252 CAMSAP2Q08AD1 1489 aa40.35■■■■■ 4.05
SMDT1-202ENST00000422252 CNTLNQ9NXG0 1405 aa40.34■■■■■ 4.05
SMDT1-202ENST00000422252 C3P01024 1663 aa40.33■■■■■ 4.05
SMDT1-202ENST00000422252 RTEL1-TNFRSF6BF6WH68 1400 aa40.33■■■■■ 4.05
SMDT1-202ENST00000422252 ILDR1Q86SU0 546 aaPredicted RBP40.32■■■■■ 4.05
SMDT1-202ENST00000422252 KANK4Q5T7N3 995 aaPredicted RBP40.3■■■■■ 4.04
SMDT1-202ENST00000422252 ADGBQ8N7X0 1667 aa40.3■■■■■ 4.04
SMDT1-202ENST00000422252 CCDC141Q6ZP82 1450 aa40.29■■■■■ 4.04
SMDT1-202ENST00000422252 RSPH4AQ5TD94 716 aa40.28■■■■■ 4.04
SMDT1-202ENST00000422252 UHRF1BP1Q6BDS2 1440 aa40.25■■■■■ 4.03
SMDT1-202ENST00000422252 SETD1BQ9UPS6 1966 aaKnown RBP40.25■■■■■ 4.03
SMDT1-202ENST00000422252 MROH2AA6NES4 1674 aa40.21■■■■■ 4.03
SMDT1-202ENST00000422252 ARHGEF5Q12774 1597 aa40.18■■■■■ 4.02
SMDT1-202ENST00000422252 GGT6Q6P531 493 aa40.18■■■■■ 4.02
SMDT1-202ENST00000422252 DHX29Q7Z478 1369 aaKnown RBP40.18■■■■■ 4.02
SMDT1-202ENST00000422252 ZMYM3Q14202 1370 aa40.16■■■■■ 4.02
SMDT1-202ENST00000422252 APLP2Q06481 763 aa40.15■■■■■ 4.02
SMDT1-202ENST00000422252 PPP6R1Q9UPN7 881 aa40.13■■■■■ 4.01
SMDT1-202ENST00000422252 MYOM3Q5VTT5 1437 aa40.13■■■■■ 4.01
SMDT1-202ENST00000422252 CLTCQ00610 1675 aaKnown RBP40.12■■■■■ 4.01
SMDT1-202ENST00000422252 TSPY4P0CV99 314 aa40.12■■■■■ 4.01
SMDT1-202ENST00000422252 TSPY10P0CW01 314 aa40.12■■■■■ 4.01
SMDT1-202ENST00000422252 MIA2Q96PC5 1412 aa40.11■■■■■ 4.01
SMDT1-202ENST00000422252 NPATQ14207 1427 aa40.1■■■■■ 4.01
SMDT1-202ENST00000422252 KIF3BO15066 747 aa40.02■■■■■ 4
SMDT1-202ENST00000422252 MAST1Q9Y2H9 1570 aa39.99■■■■□ 3.99
SMDT1-202ENST00000422252 STRCQ7RTU9 1775 aa39.99■■■■□ 3.99
SMDT1-202ENST00000422252 DMRT2Q9Y5R5 561 aa39.97■■■■□ 3.99
SMDT1-202ENST00000422252 PTPRKQ15262 1439 aa39.97■■■■□ 3.99
SMDT1-202ENST00000422252 FBXO41Q8TF61 875 aa39.95■■■■□ 3.99
SMDT1-202ENST00000422252 FAM135AQ9P2D6 1515 aa39.91■■■■□ 3.98
SMDT1-202ENST00000422252 KDM5DQ9BY66 1539 aa39.88■■■■□ 3.97
SMDT1-202ENST00000422252 MYO3AQ8NEV4 1616 aa39.86■■■■□ 3.97
SMDT1-202ENST00000422252 PTPN23Q9H3S7 1636 aa39.86■■■■□ 3.97
SMDT1-202ENST00000422252 WASHC2CQ9Y4E1 1318 aa39.85■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms