RNA–Protein interactions for RNA: ENST00000422091.1

ARHGAP4-208, Transcript of Rho GTPase activating protein 4, human

TSL 4

Gene ARHGAP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-208	ENST00000422091	ARHGEF40	Q8TER5	1519 aa		32.06	■■■□□ 2.72
ARHGAP4-208	ENST00000422091	SCAPER	Q9BY12	1400 aa		32.05	■■■□□ 2.72
ARHGAP4-208	ENST00000422091	VPS8	Q8N3P4	1428 aa		32.04	■■■□□ 2.72
ARHGAP4-208	ENST00000422091	PREX2	Q70Z35	1606 aa		32.04	■■■□□ 2.72
ARHGAP4-208	ENST00000422091	ZMYM4	Q5VZL5	1548 aa		32.03	■■■□□ 2.72
ARHGAP4-208	ENST00000422091	POGZ	Q7Z3K3	1410 aa		32.01	■■■□□ 2.72
ARHGAP4-208	ENST00000422091	CDC42BPB	Q9Y5S2	1711 aa		31.99	■■■□□ 2.71
ARHGAP4-208	ENST00000422091	EHBP1L1	Q8N3D4	1523 aa		31.99	■■■□□ 2.71
ARHGAP4-208	ENST00000422091	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.99	■■■□□ 2.71
ARHGAP4-208	ENST00000422091	MAGI2	Q86UL8	1455 aa		31.98	■■■□□ 2.71
ARHGAP4-208	ENST00000422091	ZFYVE16	Q7Z3T8	1539 aa		31.98	■■■□□ 2.71
ARHGAP4-208	ENST00000422091	CDC42BPA	Q5VT25	1732 aa		31.96	■■■□□ 2.71
ARHGAP4-208	ENST00000422091	YEATS2	Q9ULM3	1422 aa		31.95	■■■□□ 2.71
ARHGAP4-208	ENST00000422091	ZNF518A	Q6AHZ1	1483 aa		31.93	■■■□□ 2.7
ARHGAP4-208	ENST00000422091	ADAMTSL3	P82987	1691 aa		31.92	■■■□□ 2.7
ARHGAP4-208	ENST00000422091	BCORL1	Q5H9F3	1711 aa		31.92	■■■□□ 2.7
ARHGAP4-208	ENST00000422091	CCNB3	Q8WWL7	1395 aa		31.92	■■■□□ 2.7
ARHGAP4-208	ENST00000422091	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.89	■■■□□ 2.7
ARHGAP4-208	ENST00000422091	TIAM1	Q13009	1591 aa		31.89	■■■□□ 2.7
ARHGAP4-208	ENST00000422091	ABCC1	P33527	1531 aa		31.85	■■■□□ 2.69
ARHGAP4-208	ENST00000422091	MADD	Q8WXG6	1647 aa		31.85	■■■□□ 2.69
ARHGAP4-208	ENST00000422091	MAP3K1	Q13233	1512 aa		31.85	■■■□□ 2.69
ARHGAP4-208	ENST00000422091	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.84	■■■□□ 2.69
ARHGAP4-208	ENST00000422091	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.83	■■■□□ 2.69
ARHGAP4-208	ENST00000422091	SIGLEC1	Q9BZZ2	1709 aa		31.83	■■■□□ 2.69
ARHGAP4-208	ENST00000422091	ITSN2	Q9NZM3	1697 aa		31.83	■■■□□ 2.69
ARHGAP4-208	ENST00000422091	PLEKHH2	Q8IVE3	1493 aa		31.83	■■■□□ 2.69
ARHGAP4-208	ENST00000422091	KDM5C	P41229	1560 aa		31.82	■■■□□ 2.68
ARHGAP4-208	ENST00000422091	PTPRM	P28827	1452 aa		31.82	■■■□□ 2.68
ARHGAP4-208	ENST00000422091	HECW2	Q9P2P5	1572 aa		31.81	■■■□□ 2.68
ARHGAP4-208	ENST00000422091	AFAP1	Q8N556	730 aa		31.81	■■■□□ 2.68
ARHGAP4-208	ENST00000422091	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.8	■■■□□ 2.68
ARHGAP4-208	ENST00000422091	APLP2	Q06481	763 aa		31.79	■■■□□ 2.68
ARHGAP4-208	ENST00000422091	MYT1L	Q9UL68	1186 aa		31.77	■■■□□ 2.68
ARHGAP4-208	ENST00000422091	ATP10A	O60312	1499 aa		31.77	■■■□□ 2.68
ARHGAP4-208	ENST00000422091	ARHGEF12	Q9NZN5	1544 aa		31.76	■■■□□ 2.68
ARHGAP4-208	ENST00000422091	LRRC9	Q6ZRR7	1453 aa		31.76	■■■□□ 2.67
ARHGAP4-208	ENST00000422091	SAMD9L	Q8IVG5	1584 aa		31.76	■■■□□ 2.67
ARHGAP4-208	ENST00000422091	C9orf84	Q5VXU9	1444 aa		31.75	■■■□□ 2.67
ARHGAP4-208	ENST00000422091	KIAA1107	Q9UPP5	1409 aa		31.75	■■■□□ 2.67
ARHGAP4-208	ENST00000422091	RIMS1	Q86UR5	1692 aa	Known RBP	31.75	■■■□□ 2.67
ARHGAP4-208	ENST00000422091	TRAPPC8	Q9Y2L5	1435 aa		31.75	■■■□□ 2.67
ARHGAP4-208	ENST00000422091	NCOA2	Q15596	1464 aa		31.74	■■■□□ 2.67
ARHGAP4-208	ENST00000422091	MLH3	Q9UHC1	1453 aa		31.73	■■■□□ 2.67
ARHGAP4-208	ENST00000422091	MLEC	Q14165	292 aa		31.72	■■■□□ 2.67
ARHGAP4-208	ENST00000422091	SYCP2	Q9BX26	1530 aa		31.7	■■■□□ 2.67
ARHGAP4-208	ENST00000422091	DIP2C	Q9Y2E4	1556 aa		31.68	■■■□□ 2.66
ARHGAP4-208	ENST00000422091	ABCA6	Q8N139	1617 aa		31.67	■■■□□ 2.66
ARHGAP4-208	ENST00000422091	FER1L4	A9Z1Z3	1794 aa		31.63	■■■□□ 2.65
ARHGAP4-208	ENST00000422091	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.63	■■■□□ 2.65
ARHGAP4-208	ENST00000422091	PLPPR3	Q6T4P5	718 aa		31.62	■■■□□ 2.65
ARHGAP4-208	ENST00000422091	RERE	Q9P2R6	1566 aa		31.62	■■■□□ 2.65
ARHGAP4-208	ENST00000422091	SPAG9	O60271	1321 aa	Known RBP	31.61	■■■□□ 2.65
ARHGAP4-208	ENST00000422091	KIDINS220	Q9ULH0	1771 aa		31.59	■■■□□ 2.65
ARHGAP4-208	ENST00000422091	KANK4	Q5T7N3	995 aa	Predicted RBP	31.58	■■■□□ 2.65
ARHGAP4-208	ENST00000422091	RSPH4A	Q5TD94	716 aa		31.57	■■■□□ 2.64
ARHGAP4-208	ENST00000422091	ATP7A	Q04656	1500 aa		31.54	■■■□□ 2.64
ARHGAP4-208	ENST00000422091	ZNF644	Q9H582	1327 aa	Predicted RBP	31.53	■■■□□ 2.64
ARHGAP4-208	ENST00000422091	CAMSAP2	Q08AD1	1489 aa		31.52	■■■□□ 2.64
ARHGAP4-208	ENST00000422091	MBD5	Q9P267	1494 aa		31.52	■■■□□ 2.64
ARHGAP4-208	ENST00000422091	AGL	P35573	1532 aa		31.51	■■■□□ 2.63
ARHGAP4-208	ENST00000422091	INO80	Q9ULG1	1556 aa	Predicted RBP	31.51	■■■□□ 2.63
ARHGAP4-208	ENST00000422091	MIA2	Q96PC5	1412 aa		31.5	■■■□□ 2.63
ARHGAP4-208	ENST00000422091	MYOM3	Q5VTT5	1437 aa		31.49	■■■□□ 2.63
ARHGAP4-208	ENST00000422091	CCDC141	Q6ZP82	1450 aa		31.48	■■■□□ 2.63
ARHGAP4-208	ENST00000422091	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.47	■■■□□ 2.63
ARHGAP4-208	ENST00000422091	LMTK3	Q96Q04	1460 aa		31.46	■■■□□ 2.63
ARHGAP4-208	ENST00000422091	ARHGEF5	Q12774	1597 aa		31.44	■■■□□ 2.62
ARHGAP4-208	ENST00000422091	ADGB	Q8N7X0	1667 aa		31.41	■■■□□ 2.62
ARHGAP4-208	ENST00000422091	TSPY4	P0CV99	314 aa		31.4	■■■□□ 2.62
ARHGAP4-208	ENST00000422091	TSPY10	P0CW01	314 aa		31.4	■■■□□ 2.62
ARHGAP4-208	ENST00000422091	CEBPA	P49715	358 aa	Predicted RBP	31.39	■■■□□ 2.62
ARHGAP4-208	ENST00000422091	ESF1	Q9H501	851 aa	Known RBP	31.39	■■■□□ 2.62
ARHGAP4-208	ENST00000422091	A2M	P01023	1474 aa		31.39	■■■□□ 2.62
ARHGAP4-208	ENST00000422091	PLXNC1	O60486	1568 aa		31.34	■■■□□ 2.61
ARHGAP4-208	ENST00000422091	HSPA2	P54652	639 aa		31.32	■■■□□ 2.6
ARHGAP4-208	ENST00000422091	CNTLN	Q9NXG0	1405 aa		31.31	■■■□□ 2.6
ARHGAP4-208	ENST00000422091	C3	P01024	1663 aa		31.29	■■■□□ 2.6
ARHGAP4-208	ENST00000422091	PREX1	Q8TCU6	1659 aa		31.29	■■■□□ 2.6
ARHGAP4-208	ENST00000422091	PTPN23	Q9H3S7	1636 aa		31.28	■■■□□ 2.6
ARHGAP4-208	ENST00000422091	FGD6	Q6ZV73	1430 aa		31.27	■■■□□ 2.6
ARHGAP4-208	ENST00000422091	DHX29	Q7Z478	1369 aa	Known RBP	31.27	■■■□□ 2.6
ARHGAP4-208	ENST00000422091	MAST1	Q9Y2H9	1570 aa		31.26	■■■□□ 2.6
ARHGAP4-208	ENST00000422091	PPP6R1	Q9UPN7	881 aa		31.25	■■■□□ 2.59
ARHGAP4-208	ENST00000422091	TCOF1	Q13428	1488 aa	Known RBP	31.21	■■■□□ 2.59
ARHGAP4-208	ENST00000422091	UHRF1BP1	Q6BDS2	1440 aa		31.19	■■■□□ 2.58
ARHGAP4-208	ENST00000422091	GGT6	Q6P531	493 aa		31.19	■■■□□ 2.58
ARHGAP4-208	ENST00000422091	SHANK2	Q9UPX8	1470 aa		31.19	■■■□□ 2.58
ARHGAP4-208	ENST00000422091	MROH2A	A6NES4	1674 aa		31.19	■■■□□ 2.58
ARHGAP4-208	ENST00000422091	CLTC	Q00610	1675 aa	Known RBP	31.17	■■■□□ 2.58
ARHGAP4-208	ENST00000422091	CROCC2	H7BZ55	1655 aa		31.15	■■■□□ 2.58
ARHGAP4-208	ENST00000422091	SETD1B	Q9UPS6	1966 aa	Known RBP	31.14	■■■□□ 2.58
ARHGAP4-208	ENST00000422091	DNMT1	P26358	1616 aa	Known RBP	31.14	■■■□□ 2.58
ARHGAP4-208	ENST00000422091	KIF3B	O15066	747 aa		31.13	■■■□□ 2.57
ARHGAP4-208	ENST00000422091	FAM135A	Q9P2D6	1515 aa		31.13	■■■□□ 2.57
ARHGAP4-208	ENST00000422091	ZMYM3	Q14202	1370 aa		31.12	■■■□□ 2.57
ARHGAP4-208	ENST00000422091	ABCC5	O15440	1437 aa		31.12	■■■□□ 2.57
ARHGAP4-208	ENST00000422091	DAPK1	P53355	1430 aa		31.12	■■■□□ 2.57
ARHGAP4-208	ENST00000422091	ILDR1	Q86SU0	546 aa	Predicted RBP	31.1	■■■□□ 2.57
ARHGAP4-208	ENST00000422091	DUOX2	Q9NRD8	1548 aa		31.08	■■■□□ 2.57

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