RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 C2orf72A6NCS6 295 aa11.56□□□□□ -0.56
LINC00397-201ENST00000422074 FAM163AQ96GL9 167 aaPredicted RBP11.56□□□□□ -0.56
LINC00397-201ENST00000422074 ST18O60284 1047 aa11.55□□□□□ -0.56
LINC00397-201ENST00000422074 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
LINC00397-201ENST00000422074 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
LINC00397-201ENST00000422074 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
LINC00397-201ENST00000422074 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
LINC00397-201ENST00000422074 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
LINC00397-201ENST00000422074 FOXK1P85037 733 aa11.49□□□□□ -0.57
LINC00397-201ENST00000422074 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
LINC00397-201ENST00000422074 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
LINC00397-201ENST00000422074 SLC34A2O95436 690 aa11.46□□□□□ -0.57
LINC00397-201ENST00000422074 PAXIP1Q6ZW49 1069 aaPredicted RBP11.45□□□□□ -0.58
LINC00397-201ENST00000422074 POTEMA6NI47 508 aa11.44□□□□□ -0.58
LINC00397-201ENST00000422074 PDE4AP27815 886 aa11.44□□□□□ -0.58
LINC00397-201ENST00000422074 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
LINC00397-201ENST00000422074 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
LINC00397-201ENST00000422074 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
LINC00397-201ENST00000422074 DSG2Q14126 1118 aa11.43□□□□□ -0.58
LINC00397-201ENST00000422074 CADPS2Q86UW7 1296 aa11.43□□□□□ -0.58
LINC00397-201ENST00000422074 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
LINC00397-201ENST00000422074 MFSD10Q14728 455 aa11.41□□□□□ -0.58
LINC00397-201ENST00000422074 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
LINC00397-201ENST00000422074 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
LINC00397-201ENST00000422074 PLPP6Q8IY26 295 aa11.4□□□□□ -0.58
LINC00397-201ENST00000422074 PTCD2Q8WV60 388 aaKnown RBP11.37□□□□□ -0.59
LINC00397-201ENST00000422074 PPP1R15BQ5SWA1 713 aa11.36□□□□□ -0.59
LINC00397-201ENST00000422074 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
LINC00397-201ENST00000422074 LARP6Q9BRS8 491 aaKnown RBP11.35□□□□□ -0.59
LINC00397-201ENST00000422074 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
LINC00397-201ENST00000422074 EMP3P54852 163 aa11.33□□□□□ -0.6
LINC00397-201ENST00000422074 ARSIQ5FYB1 569 aa11.33□□□□□ -0.6
LINC00397-201ENST00000422074 PCDH10Q9P2E7 1040 aa11.33□□□□□ -0.6
LINC00397-201ENST00000422074 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
LINC00397-201ENST00000422074 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
LINC00397-201ENST00000422074 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
LINC00397-201ENST00000422074 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
LINC00397-201ENST00000422074 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
LINC00397-201ENST00000422074 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00397-201ENST00000422074 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
LINC00397-201ENST00000422074 CAMK2BQ13554 666 aa11.27□□□□□ -0.61
LINC00397-201ENST00000422074 TBC1D12O60347 775 aa11.25□□□□□ -0.61
LINC00397-201ENST00000422074 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
LINC00397-201ENST00000422074 TSHZ2Q9NRE2 1034 aa11.25□□□□□ -0.61
LINC00397-201ENST00000422074 FAM205CA6NFA0 338 aa11.24□□□□□ -0.61
LINC00397-201ENST00000422074 NUDT7P0C024 238 aa11.23□□□□□ -0.61
LINC00397-201ENST00000422074 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
LINC00397-201ENST00000422074 ERBB3P21860 1342 aa11.23□□□□□ -0.61
LINC00397-201ENST00000422074 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
LINC00397-201ENST00000422074 EMILIN3Q9NT22 766 aa11.22□□□□□ -0.61
LINC00397-201ENST00000422074 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
LINC00397-201ENST00000422074 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
LINC00397-201ENST00000422074 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC00397-201ENST00000422074 LHX6Q9UPM6 363 aa11.18□□□□□ -0.62
LINC00397-201ENST00000422074 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
LINC00397-201ENST00000422074 PSDA5PKW4 1024 aaPredicted RBP11.15□□□□□ -0.62
LINC00397-201ENST00000422074 ARIH1Q9Y4X5 557 aaPredicted RBP11.15□□□□□ -0.62
LINC00397-201ENST00000422074 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
LINC00397-201ENST00000422074 WDR70Q9NW82 654 aa11.14□□□□□ -0.63
LINC00397-201ENST00000422074 E2F4Q16254 413 aa11.13□□□□□ -0.63
LINC00397-201ENST00000422074 EVI5O60447 810 aa11.12□□□□□ -0.63
LINC00397-201ENST00000422074 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
LINC00397-201ENST00000422074 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
LINC00397-201ENST00000422074 DPYSL4O14531 572 aa11.07□□□□□ -0.64
LINC00397-201ENST00000422074 PBX2P40425 430 aa11.06□□□□□ -0.64
LINC00397-201ENST00000422074 FOSBP53539 338 aa11.05□□□□□ -0.64
LINC00397-201ENST00000422074 POTEEQ6S8J3 1075 aa11.05□□□□□ -0.64
LINC00397-201ENST00000422074 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
LINC00397-201ENST00000422074 PTGER2P43116 358 aa11.04□□□□□ -0.64
LINC00397-201ENST00000422074 PPP4R3BQ5MIZ7 849 aa11.04□□□□□ -0.64
LINC00397-201ENST00000422074 JPH4Q96JJ6 628 aa11.04□□□□□ -0.64
LINC00397-201ENST00000422074 PDIA6Q15084 440 aa11.03□□□□□ -0.64
LINC00397-201ENST00000422074 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
LINC00397-201ENST00000422074 ZNF454Q8N9F8 522 aa11□□□□□ -0.65
LINC00397-201ENST00000422074 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
LINC00397-201ENST00000422074 BCL2L12Q9HB09 334 aa10.99□□□□□ -0.65
LINC00397-201ENST00000422074 ARHGAP33O14559 1287 aa10.98□□□□□ -0.65
LINC00397-201ENST00000422074 PHF14O94880 888 aa10.98□□□□□ -0.65
LINC00397-201ENST00000422074 SPNS2Q8IVW8 549 aa10.98□□□□□ -0.65
LINC00397-201ENST00000422074 PCDHGA10Q9Y5H3 936 aa10.98□□□□□ -0.65
LINC00397-201ENST00000422074 KCNV2Q8TDN2 545 aa10.97□□□□□ -0.65
LINC00397-201ENST00000422074 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
LINC00397-201ENST00000422074 LSM11P83369 360 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC00397-201ENST00000422074 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
LINC00397-201ENST00000422074 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
LINC00397-201ENST00000422074 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
LINC00397-201ENST00000422074 FBXW7Q969H0 707 aa10.95□□□□□ -0.66
LINC00397-201ENST00000422074 EPAS1Q99814 870 aa10.95□□□□□ -0.66
LINC00397-201ENST00000422074 AXIN2Q9Y2T1 843 aa10.95□□□□□ -0.66
LINC00397-201ENST00000422074 TYW1BQ6NUM6 668 aa10.93□□□□□ -0.66
LINC00397-201ENST00000422074 ADAM33Q9BZ11 813 aa10.93□□□□□ -0.66
LINC00397-201ENST00000422074 PSEN2P49810 448 aa10.91□□□□□ -0.66
LINC00397-201ENST00000422074 TK2O00142 265 aa10.9□□□□□ -0.66
LINC00397-201ENST00000422074 PTPREP23469 700 aa10.89□□□□□ -0.67
LINC00397-201ENST00000422074 DMRTA1Q5VZB9 504 aa10.89□□□□□ -0.67
LINC00397-201ENST00000422074 DDX12PQ92771 950 aa10.89□□□□□ -0.67
LINC00397-201ENST00000422074 KCNK17Q96T54 332 aa10.89□□□□□ -0.67
LINC00397-201ENST00000422074 SLC4A5Q9BY07 1137 aa10.89□□□□□ -0.67
LINC00397-201ENST00000422074 ANKRD13DQ6ZTN6 518 aa10.88□□□□□ -0.67
LINC00397-201ENST00000422074 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms