RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 ZNF687Q8N1G0 1237 aa13.95□□□□□ -0.18
SFXN1-202ENST00000421887 MS4A4AQ96JQ5 239 aa13.95□□□□□ -0.18
SFXN1-202ENST00000421887 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
SFXN1-202ENST00000421887 RNF25Q96BH1 459 aaPredicted RBP13.93□□□□□ -0.18
SFXN1-202ENST00000421887 VGFO15240 615 aaPredicted RBP13.91□□□□□ -0.18
SFXN1-202ENST00000421887 ARSIQ5FYB1 569 aa13.9□□□□□ -0.18
SFXN1-202ENST00000421887 ANKRD13DQ6ZTN6 518 aa13.85□□□□□ -0.19
SFXN1-202ENST00000421887 KHSRPQ92945 711 aaKnown RBP eCLIP13.84□□□□□ -0.191e-8■□□□□ 8.8
SFXN1-202ENST00000421887 NLRP6P59044 892 aa13.82□□□□□ -0.2
SFXN1-202ENST00000421887 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
SFXN1-202ENST00000421887 PTGER2P43116 358 aa13.78□□□□□ -0.2
SFXN1-202ENST00000421887 BCL11BQ9C0K0 894 aaPredicted RBP13.78□□□□□ -0.2
SFXN1-202ENST00000421887 STK24Q9Y6E0 443 aa13.75□□□□□ -0.21
SFXN1-202ENST00000421887 FBXO22Q8NEZ5 403 aa13.74□□□□□ -0.21
SFXN1-202ENST00000421887 TAOK2Q9UL54 1235 aa13.73□□□□□ -0.21
SFXN1-202ENST00000421887 LSM11P83369 360 aaKnown RBP eCLIP13.71□□□□□ -0.21
SFXN1-202ENST00000421887 NUDT7P0C024 238 aa13.69□□□□□ -0.22
SFXN1-202ENST00000421887 C2orf72A6NCS6 295 aa13.68□□□□□ -0.22
SFXN1-202ENST00000421887 MFRPQ9BY79 579 aa13.68□□□□□ -0.22
SFXN1-202ENST00000421887 STK25O00506 426 aa13.66□□□□□ -0.22
SFXN1-202ENST00000421887 KIF3CO14782 793 aa13.63□□□□□ -0.23
SFXN1-202ENST00000421887 AXIN2Q9Y2T1 843 aa13.63□□□□□ -0.23
SFXN1-202ENST00000421887 LHX6Q9UPM6 363 aa13.62□□□□□ -0.23
SFXN1-202ENST00000421887 PBX2P40425 430 aa13.6□□□□□ -0.23
SFXN1-202ENST00000421887 PCDHGA4Q9Y5G9 962 aa13.6□□□□□ -0.23
SFXN1-202ENST00000421887 TMC2Q8TDI7 906 aa13.58□□□□□ -0.24
SFXN1-202ENST00000421887 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
SFXN1-202ENST00000421887 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
SFXN1-202ENST00000421887 SLC34A2O95436 690 aa13.53□□□□□ -0.24
SFXN1-202ENST00000421887 PLA2G2EQ9NZK7 142 aa13.5□□□□□ -0.25
SFXN1-202ENST00000421887 HCSTQ9UBK5 93 aa13.48□□□□□ -0.25
SFXN1-202ENST00000421887 ARHGAP33O14559 1287 aa13.47□□□□□ -0.25
SFXN1-202ENST00000421887 ADGRD1Q6QNK2 874 aa13.47□□□□□ -0.25
SFXN1-202ENST00000421887 RGL2O15211 777 aa13.44□□□□□ -0.26
SFXN1-202ENST00000421887 PPP1R37O75864 691 aa13.43□□□□□ -0.26
SFXN1-202ENST00000421887 PSDA5PKW4 1024 aaPredicted RBP13.42□□□□□ -0.26
SFXN1-202ENST00000421887 PSEN2P49810 448 aa13.39□□□□□ -0.27
SFXN1-202ENST00000421887 DMRTA1Q5VZB9 504 aa13.37□□□□□ -0.27
SFXN1-202ENST00000421887 PKD2Q13563 968 aa13.35□□□□□ -0.27
SFXN1-202ENST00000421887 PTCD2Q8WV60 388 aaKnown RBP13.34□□□□□ -0.27
SFXN1-202ENST00000421887 STAC3Q96MF2 364 aa13.34□□□□□ -0.27
SFXN1-202ENST00000421887 KDM4FA0A1W2PPD8 638 aa13.33□□□□□ -0.28
SFXN1-202ENST00000421887 TK2O00142 265 aa13.33□□□□□ -0.28
SFXN1-202ENST00000421887 PLPP6Q8IY26 295 aa13.33□□□□□ -0.28
SFXN1-202ENST00000421887 KCTD12Q96CX2 325 aaKnown RBP13.33□□□□□ -0.28
SFXN1-202ENST00000421887 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
SFXN1-202ENST00000421887 HRO43593 1189 aa13.31□□□□□ -0.28
SFXN1-202ENST00000421887 FOXK1P85037 733 aa13.3□□□□□ -0.28
SFXN1-202ENST00000421887 TBC1D12O60347 775 aa13.28□□□□□ -0.28
SFXN1-202ENST00000421887 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
SFXN1-202ENST00000421887 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
SFXN1-202ENST00000421887 DSG2Q14126 1118 aa13.25□□□□□ -0.29
SFXN1-202ENST00000421887 KCNK17Q96T54 332 aa13.25□□□□□ -0.29
SFXN1-202ENST00000421887 PTPN5P54829 565 aa13.21□□□□□ -0.29
SFXN1-202ENST00000421887 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
SFXN1-202ENST00000421887 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
SFXN1-202ENST00000421887 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
SFXN1-202ENST00000421887 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
SFXN1-202ENST00000421887 OXER1Q8TDS5 423 aa13.1□□□□□ -0.31
SFXN1-202ENST00000421887 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
SFXN1-202ENST00000421887 GOLGA8CPA6NN73 597 aa13.07□□□□□ -0.32
SFXN1-202ENST00000421887 BCL2L12Q9HB09 334 aa13.07□□□□□ -0.32
SFXN1-202ENST00000421887 PTPREP23469 700 aa13.04□□□□□ -0.32
SFXN1-202ENST00000421887 THSD4Q6ZMP0 1018 aa13.03□□□□□ -0.32
SFXN1-202ENST00000421887 PPP1R15BQ5SWA1 713 aa13.02□□□□□ -0.33
SFXN1-202ENST00000421887 WNT2BQ93097 391 aa13.02□□□□□ -0.33
SFXN1-202ENST00000421887 SLC4A5Q9BY07 1137 aa13.02□□□□□ -0.33
SFXN1-202ENST00000421887 BHMG1C9JSJ3 638 aaPredicted RBP13.01□□□□□ -0.33
SFXN1-202ENST00000421887 FOSBP53539 338 aa13.01□□□□□ -0.33
SFXN1-202ENST00000421887 MRPL50Q8N5N7 158 aaKnown RBP13.01□□□□□ -0.33
SFXN1-202ENST00000421887 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
SFXN1-202ENST00000421887 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
SFXN1-202ENST00000421887 IRX2Q9BZI1 471 aaPredicted RBP12.98□□□□□ -0.33
SFXN1-202ENST00000421887 RGS20O76081 388 aa12.96□□□□□ -0.33
SFXN1-202ENST00000421887 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.33
SFXN1-202ENST00000421887 IFFO2Q5TF58 517 aa12.96□□□□□ -0.33
SFXN1-202ENST00000421887 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
SFXN1-202ENST00000421887 EVI5O60447 810 aa12.94□□□□□ -0.34
SFXN1-202ENST00000421887 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
SFXN1-202ENST00000421887 JPH4Q96JJ6 628 aa12.94□□□□□ -0.34
SFXN1-202ENST00000421887 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
SFXN1-202ENST00000421887 A0A0G2JS52 829 aa12.93□□□□□ -0.34
SFXN1-202ENST00000421887 PDE4AP27815 886 aa12.93□□□□□ -0.34
SFXN1-202ENST00000421887 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
SFXN1-202ENST00000421887 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
SFXN1-202ENST00000421887 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
SFXN1-202ENST00000421887 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
SFXN1-202ENST00000421887 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
SFXN1-202ENST00000421887 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
SFXN1-202ENST00000421887 ANKK1Q8NFD2 765 aa12.83□□□□□ -0.36
SFXN1-202ENST00000421887 DDX27Q96GQ7 796 aaKnown RBP12.83□□□□□ -0.36
SFXN1-202ENST00000421887 PROX2Q3B8N5 592 aa12.82□□□□□ -0.36
SFXN1-202ENST00000421887 PPP1R3GB7ZBB8 358 aa12.8□□□□□ -0.36
SFXN1-202ENST00000421887 RABGEF1Q9UJ41 708 aa12.8□□□□□ -0.36
SFXN1-202ENST00000421887 BCAMP50895 628 aa12.78□□□□□ -0.36
SFXN1-202ENST00000421887 PCDHGA10Q9Y5H3 936 aa12.78□□□□□ -0.36
SFXN1-202ENST00000421887 COL9A1P20849 921 aa12.77□□□□□ -0.37
SFXN1-202ENST00000421887 EMILIN3Q9NT22 766 aa12.74□□□□□ -0.37
SFXN1-202ENST00000421887 ITGBL1O95965 494 aaPredicted RBP12.73□□□□□ -0.37
SFXN1-202ENST00000421887 GTPBP6O43824 516 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms