RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 ARHGAP5Q13017 1502 aa30.44■■■□□ 2.46
GCDH-202ENST00000421816 GPATCH8Q9UKJ3 1502 aaKnown RBP30.43■■■□□ 2.46
GCDH-202ENST00000421816 EFCAB2Q5VUJ9 269 aa30.43■■■□□ 2.46
GCDH-202ENST00000421816 KANK4Q5T7N3 995 aaPredicted RBP30.42■■■□□ 2.46
GCDH-202ENST00000421816 APLP2Q06481 763 aa30.41■■■□□ 2.46
GCDH-202ENST00000421816 NCOA2Q15596 1464 aa30.39■■■□□ 2.46
GCDH-202ENST00000421816 CCNB3Q8WWL7 1395 aa30.39■■■□□ 2.45
GCDH-202ENST00000421816 ADGRL1O94910 1474 aa30.36■■■□□ 2.45
GCDH-202ENST00000421816 FRMPD1Q5SYB0 1578 aa30.36■■■□□ 2.45
GCDH-202ENST00000421816 ITSN2Q9NZM3 1697 aa30.36■■■□□ 2.45
GCDH-202ENST00000421816 RICTORQ6R327 1708 aa30.35■■■□□ 2.45
GCDH-202ENST00000421816 DENND4BO75064 1496 aaPredicted RBP30.34■■■□□ 2.45
GCDH-202ENST00000421816 SCAPERQ9BY12 1400 aa30.31■■■□□ 2.44
GCDH-202ENST00000421816 RAPGEF3O95398 923 aa30.31■■■□□ 2.44
GCDH-202ENST00000421816 SAMD9LQ8IVG5 1584 aa30.28■■■□□ 2.44
GCDH-202ENST00000421816 ABCC1P33527 1531 aa30.28■■■□□ 2.44
GCDH-202ENST00000421816 CFDP1Q9UEE9 299 aaPredicted RBP30.27■■■□□ 2.44
GCDH-202ENST00000421816 POGZQ7Z3K3 1410 aa30.26■■■□□ 2.43
GCDH-202ENST00000421816 ZMYM4Q5VZL5 1548 aa30.23■■■□□ 2.43
GCDH-202ENST00000421816 ARHGEF12Q9NZN5 1544 aa30.23■■■□□ 2.43
GCDH-202ENST00000421816 ZNF777Q9ULD5 760 aaPredicted RBP30.21■■■□□ 2.43
GCDH-202ENST00000421816 PLEKHH2Q8IVE3 1493 aa30.19■■■□□ 2.42
GCDH-202ENST00000421816 ZNF518AQ6AHZ1 1483 aa30.19■■■□□ 2.42
GCDH-202ENST00000421816 KIAA1107Q9UPP5 1409 aa30.18■■■□□ 2.42
GCDH-202ENST00000421816 KDM5CP41229 1560 aa30.18■■■□□ 2.42
GCDH-202ENST00000421816 MYOM3Q5VTT5 1437 aa30.17■■■□□ 2.42
GCDH-202ENST00000421816 SYCP2Q9BX26 1530 aa30.17■■■□□ 2.42
GCDH-202ENST00000421816 TRAPPC8Q9Y2L5 1435 aa30.15■■■□□ 2.42
GCDH-202ENST00000421816 MAGI2Q86UL8 1455 aa30.14■■■□□ 2.42
GCDH-202ENST00000421816 ZNF644Q9H582 1327 aaPredicted RBP30.14■■■□□ 2.42
GCDH-202ENST00000421816 MIA2Q96PC5 1412 aa30.13■■■□□ 2.41
GCDH-202ENST00000421816 AFAP1Q8N556 730 aa30.12■■■□□ 2.41
GCDH-202ENST00000421816 CAMSAP2Q08AD1 1489 aa30.12■■■□□ 2.41
GCDH-202ENST00000421816 ARHGEF40Q8TER5 1519 aa30.12■■■□□ 2.41
GCDH-202ENST00000421816 HNRNPMP52272 730 aaKnown RBP eCLIP30.1■■■□□ 2.41
GCDH-202ENST00000421816 ZFYVE16Q7Z3T8 1539 aa30.09■■■□□ 2.41
GCDH-202ENST00000421816 MBD5Q9P267 1494 aa30.09■■■□□ 2.41
GCDH-202ENST00000421816 HECW2Q9P2P5 1572 aa30.07■■■□□ 2.4
GCDH-202ENST00000421816 MLH3Q9UHC1 1453 aa30.06■■■□□ 2.4
GCDH-202ENST00000421816 YEATS2Q9ULM3 1422 aa30.06■■■□□ 2.4
GCDH-202ENST00000421816 KIDINS220Q9ULH0 1771 aa30.01■■■□□ 2.39
GCDH-202ENST00000421816 FGD6Q6ZV73 1430 aa30.01■■■□□ 2.39
GCDH-202ENST00000421816 ARHGEF5Q12774 1597 aa30.01■■■□□ 2.39
GCDH-202ENST00000421816 PTPN23Q9H3S7 1636 aa30■■■□□ 2.39
GCDH-202ENST00000421816 INO80Q9ULG1 1556 aaPredicted RBP29.98■■■□□ 2.39
GCDH-202ENST00000421816 TCOF1Q13428 1488 aaKnown RBP29.97■■■□□ 2.39
GCDH-202ENST00000421816 CCDC141Q6ZP82 1450 aa29.97■■■□□ 2.39
GCDH-202ENST00000421816 DIP2CQ9Y2E4 1556 aa29.97■■■□□ 2.39
GCDH-202ENST00000421816 ABCA6Q8N139 1617 aa29.96■■■□□ 2.39
GCDH-202ENST00000421816 ATP10AO60312 1499 aa29.96■■■□□ 2.39
GCDH-202ENST00000421816 RSPH4AQ5TD94 716 aa29.96■■■□□ 2.39
GCDH-202ENST00000421816 SPAG9O60271 1321 aaKnown RBP29.96■■■□□ 2.39
GCDH-202ENST00000421816 PPARGC1BQ86YN6 1023 aaKnown RBP29.95■■■□□ 2.39
GCDH-202ENST00000421816 ATP7AQ04656 1500 aa29.94■■■□□ 2.38
GCDH-202ENST00000421816 SIGLEC1Q9BZZ2 1709 aa29.93■■■□□ 2.38
GCDH-202ENST00000421816 MYT1LQ9UL68 1186 aa29.92■■■□□ 2.38
GCDH-202ENST00000421816 REREQ9P2R6 1566 aa29.91■■■□□ 2.38
GCDH-202ENST00000421816 C9orf84Q5VXU9 1444 aa29.91■■■□□ 2.38
GCDH-202ENST00000421816 RTEL1-TNFRSF6BF6WH68 1400 aa29.89■■■□□ 2.38
GCDH-202ENST00000421816 MAST1Q9Y2H9 1570 aa29.86■■■□□ 2.37
GCDH-202ENST00000421816 KDM4FA0A1W2PPD8 638 aa29.85■■■□□ 2.37
GCDH-202ENST00000421816 DNMT1P26358 1616 aaKnown RBP29.84■■■□□ 2.37
GCDH-202ENST00000421816 BCORL1Q5H9F3 1711 aa29.83■■■□□ 2.37
GCDH-202ENST00000421816 CROCC2H7BZ55 1655 aa29.83■■■□□ 2.37
GCDH-202ENST00000421816 ADGBQ8N7X0 1667 aa29.82■■■□□ 2.36
GCDH-202ENST00000421816 ABCC5O15440 1437 aa29.81■■■□□ 2.36
GCDH-202ENST00000421816 TSPY4P0CV99 314 aa29.81■■■□□ 2.36
GCDH-202ENST00000421816 TSPY10P0CW01 314 aa29.81■■■□□ 2.36
GCDH-202ENST00000421816 ARID4BQ4LE39 1312 aaPredicted RBP29.8■■■□□ 2.36
GCDH-202ENST00000421816 AGLP35573 1532 aa29.79■■■□□ 2.36
GCDH-202ENST00000421816 DAPK1P53355 1430 aa29.79■■■□□ 2.36
GCDH-202ENST00000421816 ADAMTSL3P82987 1691 aa29.79■■■□□ 2.36
GCDH-202ENST00000421816 SHANK2Q9UPX8 1470 aa29.78■■■□□ 2.36
GCDH-202ENST00000421816 PLXNC1O60486 1568 aa29.77■■■□□ 2.36
GCDH-202ENST00000421816 A2MP01023 1474 aa29.76■■■□□ 2.35
GCDH-202ENST00000421816 FAM50AQ14320 339 aaKnown RBP29.74■■■□□ 2.35
GCDH-202ENST00000421816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.72■■■□□ 2.35
GCDH-202ENST00000421816 RRBP1Q9P2E9 1410 aaKnown RBP29.71■■■□□ 2.35
GCDH-202ENST00000421816 DHX29Q7Z478 1369 aaKnown RBP29.69■■■□□ 2.34
GCDH-202ENST00000421816 MADDQ8WXG6 1647 aa29.68■■■□□ 2.34
GCDH-202ENST00000421816 MLECQ14165 292 aa29.64■■■□□ 2.34
GCDH-202ENST00000421816 ADGRL2O95490 1459 aa29.62■■■□□ 2.33
GCDH-202ENST00000421816 FER1L4A9Z1Z3 1794 aa29.62■■■□□ 2.33
GCDH-202ENST00000421816 PTPRKQ15262 1439 aa29.61■■■□□ 2.33
GCDH-202ENST00000421816 DUOX2Q9NRD8 1548 aa29.6■■■□□ 2.33
GCDH-202ENST00000421816 RIMS1Q86UR5 1692 aaKnown RBP29.6■■■□□ 2.33
GCDH-202ENST00000421816 NCOA1Q15788 1441 aa29.58■■■□□ 2.33
GCDH-202ENST00000421816 ANKRD30AQ9BXX3 1397 aa29.58■■■□□ 2.33
GCDH-202ENST00000421816 KIF15Q9NS87 1388 aa29.58■■■□□ 2.33
GCDH-202ENST00000421816 CHIC2Q9UKJ5 165 aa29.58■■■□□ 2.33
GCDH-202ENST00000421816 EIF2AK4Q9P2K8 1649 aaKnown RBP29.56■■■□□ 2.32
GCDH-202ENST00000421816 PTPRMP28827 1452 aa29.55■■■□□ 2.32
GCDH-202ENST00000421816 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
GCDH-202ENST00000421816 RRP7BPQ9NSQ0 103 aa29.54■■■□□ 2.32
GCDH-202ENST00000421816 KIF3BO15066 747 aa29.51■■■□□ 2.31
GCDH-202ENST00000421816 ERBINQ96RT1 1412 aa29.51■■■□□ 2.31
GCDH-202ENST00000421816 RNF17Q9BXT8 1623 aaKnown RBP29.5■■■□□ 2.31
GCDH-202ENST00000421816 ROCK1Q13464 1354 aa29.5■■■□□ 2.31
GCDH-202ENST00000421816 GGT6Q6P531 493 aa29.48■■■□□ 2.31
GCDH-202ENST00000421816 ITGAEP38570 1179 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms