RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 ARHGAP5Q13017 1502 aa29.25■■■□□ 2.27
DDR1-233ENST00000421124 APLP2Q06481 763 aa29.25■■■□□ 2.27
DDR1-233ENST00000421124 AKNAQ7Z591 1439 aa29.24■■■□□ 2.27
DDR1-233ENST00000421124 EFCAB2Q5VUJ9 269 aa29.22■■■□□ 2.27
DDR1-233ENST00000421124 GPATCH8Q9UKJ3 1502 aaKnown RBP29.19■■■□□ 2.26
DDR1-233ENST00000421124 ITSN2Q9NZM3 1697 aa29.18■■■□□ 2.26
DDR1-233ENST00000421124 CCNB3Q8WWL7 1395 aa29.18■■■□□ 2.26
DDR1-233ENST00000421124 KANK4Q5T7N3 995 aaPredicted RBP29.17■■■□□ 2.26
DDR1-233ENST00000421124 NCOA2Q15596 1464 aa29.17■■■□□ 2.26
DDR1-233ENST00000421124 ADGRL1O94910 1474 aa29.16■■■□□ 2.26
DDR1-233ENST00000421124 RICTORQ6R327 1708 aa29.14■■■□□ 2.26
DDR1-233ENST00000421124 DENND4BO75064 1496 aaPredicted RBP29.14■■■□□ 2.26
DDR1-233ENST00000421124 FRMPD1Q5SYB0 1578 aa29.13■■■□□ 2.25
DDR1-233ENST00000421124 SCAPERQ9BY12 1400 aa29.11■■■□□ 2.25
DDR1-233ENST00000421124 RAPGEF3O95398 923 aa29.1■■■□□ 2.25
DDR1-233ENST00000421124 ABCC1P33527 1531 aa29.08■■■□□ 2.25
DDR1-233ENST00000421124 SAMD9LQ8IVG5 1584 aa29.07■■■□□ 2.24
DDR1-233ENST00000421124 CFDP1Q9UEE9 299 aaPredicted RBP29.07■■■□□ 2.24
DDR1-233ENST00000421124 POGZQ7Z3K3 1410 aa29.05■■■□□ 2.24
DDR1-233ENST00000421124 ZNF777Q9ULD5 760 aaPredicted RBP29.03■■■□□ 2.24
DDR1-233ENST00000421124 ZMYM4Q5VZL5 1548 aa29.01■■■□□ 2.23
DDR1-233ENST00000421124 ZNF518AQ6AHZ1 1483 aa28.99■■■□□ 2.23
DDR1-233ENST00000421124 PLEKHH2Q8IVE3 1493 aa28.99■■■□□ 2.23
DDR1-233ENST00000421124 ARHGEF12Q9NZN5 1544 aa28.99■■■□□ 2.23
DDR1-233ENST00000421124 SYCP2Q9BX26 1530 aa28.98■■■□□ 2.23
DDR1-233ENST00000421124 KDM5CP41229 1560 aa28.96■■■□□ 2.23
DDR1-233ENST00000421124 MYOM3Q5VTT5 1437 aa28.95■■■□□ 2.23
DDR1-233ENST00000421124 KIAA1107Q9UPP5 1409 aa28.94■■■□□ 2.22
DDR1-233ENST00000421124 TRAPPC8Q9Y2L5 1435 aa28.94■■■□□ 2.22
DDR1-233ENST00000421124 MAGI2Q86UL8 1455 aa28.93■■■□□ 2.22
DDR1-233ENST00000421124 ARHGEF40Q8TER5 1519 aa28.93■■■□□ 2.22
DDR1-233ENST00000421124 CAMSAP2Q08AD1 1489 aa28.91■■■□□ 2.22
DDR1-233ENST00000421124 ZNF644Q9H582 1327 aaPredicted RBP28.91■■■□□ 2.22
DDR1-233ENST00000421124 ZFYVE16Q7Z3T8 1539 aa28.9■■■□□ 2.22
DDR1-233ENST00000421124 AFAP1Q8N556 730 aa28.9■■■□□ 2.22
DDR1-233ENST00000421124 MIA2Q96PC5 1412 aa28.9■■■□□ 2.22
DDR1-233ENST00000421124 HECW2Q9P2P5 1572 aa28.89■■■□□ 2.22
DDR1-233ENST00000421124 HNRNPMP52272 730 aaKnown RBP eCLIP28.89■■■□□ 2.22
DDR1-233ENST00000421124 YEATS2Q9ULM3 1422 aa28.86■■■□□ 2.21
DDR1-233ENST00000421124 MBD5Q9P267 1494 aa28.84■■■□□ 2.21
DDR1-233ENST00000421124 MLH3Q9UHC1 1453 aa28.84■■■□□ 2.21
DDR1-233ENST00000421124 KIDINS220Q9ULH0 1771 aa28.82■■■□□ 2.2
DDR1-233ENST00000421124 PTPN23Q9H3S7 1636 aa28.81■■■□□ 2.2
DDR1-233ENST00000421124 FGD6Q6ZV73 1430 aa28.8■■■□□ 2.2
DDR1-233ENST00000421124 MYT1LQ9UL68 1186 aa28.8■■■□□ 2.2
DDR1-233ENST00000421124 ARHGEF5Q12774 1597 aa28.79■■■□□ 2.2
DDR1-233ENST00000421124 ABCA6Q8N139 1617 aa28.78■■■□□ 2.2
DDR1-233ENST00000421124 INO80Q9ULG1 1556 aaPredicted RBP28.78■■■□□ 2.2
DDR1-233ENST00000421124 DIP2CQ9Y2E4 1556 aa28.78■■■□□ 2.2
DDR1-233ENST00000421124 CCDC141Q6ZP82 1450 aa28.78■■■□□ 2.2
DDR1-233ENST00000421124 SPAG9O60271 1321 aaKnown RBP28.77■■■□□ 2.2
DDR1-233ENST00000421124 PPARGC1BQ86YN6 1023 aaKnown RBP28.77■■■□□ 2.2
DDR1-233ENST00000421124 ATP10AO60312 1499 aa28.76■■■□□ 2.19
DDR1-233ENST00000421124 ATP7AQ04656 1500 aa28.75■■■□□ 2.19
DDR1-233ENST00000421124 RSPH4AQ5TD94 716 aa28.75■■■□□ 2.19
DDR1-233ENST00000421124 TCOF1Q13428 1488 aaKnown RBP28.73■■■□□ 2.19
DDR1-233ENST00000421124 SIGLEC1Q9BZZ2 1709 aa28.72■■■□□ 2.19
DDR1-233ENST00000421124 C9orf84Q5VXU9 1444 aa28.72■■■□□ 2.19
DDR1-233ENST00000421124 REREQ9P2R6 1566 aa28.7■■■□□ 2.18
DDR1-233ENST00000421124 RTEL1-TNFRSF6BF6WH68 1400 aa28.68■■■□□ 2.18
DDR1-233ENST00000421124 ARID4BQ4LE39 1312 aaPredicted RBP28.67■■■□□ 2.18
DDR1-233ENST00000421124 BCORL1Q5H9F3 1711 aa28.66■■■□□ 2.18
DDR1-233ENST00000421124 CROCC2H7BZ55 1655 aa28.66■■■□□ 2.18
DDR1-233ENST00000421124 ADGBQ8N7X0 1667 aa28.65■■■□□ 2.18
DDR1-233ENST00000421124 MAST1Q9Y2H9 1570 aa28.65■■■□□ 2.18
DDR1-233ENST00000421124 DNMT1P26358 1616 aaKnown RBP28.65■■■□□ 2.18
DDR1-233ENST00000421124 TSPY4P0CV99 314 aa28.64■■■□□ 2.18
DDR1-233ENST00000421124 TSPY10P0CW01 314 aa28.64■■■□□ 2.18
DDR1-233ENST00000421124 KDM4FA0A1W2PPD8 638 aa28.63■■■□□ 2.17
DDR1-233ENST00000421124 ADAMTSL3P82987 1691 aa28.6■■■□□ 2.17
DDR1-233ENST00000421124 FAM50AQ14320 339 aaKnown RBP28.59■■■□□ 2.17
DDR1-233ENST00000421124 ABCC5O15440 1437 aa28.59■■■□□ 2.17
DDR1-233ENST00000421124 DAPK1P53355 1430 aa28.59■■■□□ 2.17
DDR1-233ENST00000421124 AGLP35573 1532 aa28.59■■■□□ 2.17
DDR1-233ENST00000421124 A2MP01023 1474 aa28.58■■■□□ 2.17
DDR1-233ENST00000421124 SHANK2Q9UPX8 1470 aa28.58■■■□□ 2.17
DDR1-233ENST00000421124 PLXNC1O60486 1568 aa28.57■■■□□ 2.16
DDR1-233ENST00000421124 MADDQ8WXG6 1647 aa28.52■■■□□ 2.16
DDR1-233ENST00000421124 MLECQ14165 292 aa28.5■■■□□ 2.15
DDR1-233ENST00000421124 FER1L4A9Z1Z3 1794 aa28.5■■■□□ 2.15
DDR1-233ENST00000421124 DHX29Q7Z478 1369 aaKnown RBP28.49■■■□□ 2.15
DDR1-233ENST00000421124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.49■■■□□ 2.15
DDR1-233ENST00000421124 RRBP1Q9P2E9 1410 aaKnown RBP28.48■■■□□ 2.15
DDR1-233ENST00000421124 RIMS1Q86UR5 1692 aaKnown RBP28.46■■■□□ 2.15
DDR1-233ENST00000421124 CHIC2Q9UKJ5 165 aa28.42■■■□□ 2.14
DDR1-233ENST00000421124 DUOX2Q9NRD8 1548 aa28.42■■■□□ 2.14
DDR1-233ENST00000421124 ADGRL2O95490 1459 aa28.41■■■□□ 2.14
DDR1-233ENST00000421124 ANKRD30AQ9BXX3 1397 aa28.4■■■□□ 2.14
DDR1-233ENST00000421124 KIF15Q9NS87 1388 aa28.4■■■□□ 2.14
DDR1-233ENST00000421124 EIF2AK4Q9P2K8 1649 aaKnown RBP28.39■■■□□ 2.13
DDR1-233ENST00000421124 PTPRMP28827 1452 aa28.38■■■□□ 2.13
DDR1-233ENST00000421124 PTPRKQ15262 1439 aa28.37■■■□□ 2.13
DDR1-233ENST00000421124 NCOA1Q15788 1441 aa28.37■■■□□ 2.13
DDR1-233ENST00000421124 RRP7BPQ9NSQ0 103 aa28.37■■■□□ 2.13
DDR1-233ENST00000421124 KIF3BO15066 747 aa28.35■■■□□ 2.13
DDR1-233ENST00000421124 ITGAEP38570 1179 aa28.33■■■□□ 2.13
DDR1-233ENST00000421124 GGT6Q6P531 493 aa28.33■■■□□ 2.13
DDR1-233ENST00000421124 ERBINQ96RT1 1412 aa28.33■■■□□ 2.13
DDR1-233ENST00000421124 RNF17Q9BXT8 1623 aaKnown RBP28.32■■■□□ 2.12
DDR1-233ENST00000421124 ESF1Q9H501 851 aaKnown RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms