RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 PDE4AP27815 886 aa9.68□□□□□ -0.86
PTP4A1P1-201ENST00000420539 IRX5P78411 483 aaPredicted RBP9.68□□□□□ -0.86
PTP4A1P1-201ENST00000420539 PLCG2P16885 1265 aa9.67□□□□□ -0.86
PTP4A1P1-201ENST00000420539 PELP1Q8IZL8 1130 aaKnown RBP9.67□□□□□ -0.86
PTP4A1P1-201ENST00000420539 OCEL1Q9H607 264 aa9.67□□□□□ -0.86
PTP4A1P1-201ENST00000420539 IER5LQ5T953 404 aa9.66□□□□□ -0.86
PTP4A1P1-201ENST00000420539 MICALL2Q8IY33 904 aa9.66□□□□□ -0.86
PTP4A1P1-201ENST00000420539 G3V3G9 751 aa9.65□□□□□ -0.86
PTP4A1P1-201ENST00000420539 SEC24BO95487 1268 aa9.65□□□□□ -0.86
PTP4A1P1-201ENST00000420539 E2F4Q16254 413 aa9.65□□□□□ -0.86
PTP4A1P1-201ENST00000420539 NPM2Q86SE8 214 aaKnown RBP9.65□□□□□ -0.86
PTP4A1P1-201ENST00000420539 CRISPLD2Q9H0B8 497 aa9.65□□□□□ -0.86
PTP4A1P1-201ENST00000420539 SUPT5HO00267 1087 aaKnown RBP9.64□□□□□ -0.87
PTP4A1P1-201ENST00000420539 DDX27Q96GQ7 796 aaKnown RBP9.64□□□□□ -0.87
PTP4A1P1-201ENST00000420539 BOLA1Q9Y3E2 137 aa9.62□□□□□ -0.87
PTP4A1P1-201ENST00000420539 COLQQ9Y215 455 aaPredicted RBP9.61□□□□□ -0.87
PTP4A1P1-201ENST00000420539 MFSD10Q14728 455 aa9.6□□□□□ -0.87
PTP4A1P1-201ENST00000420539 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
PTP4A1P1-201ENST00000420539 SLC39A7Q92504 469 aa9.59□□□□□ -0.87
PTP4A1P1-201ENST00000420539 PPP1R15BQ5SWA1 713 aa9.58□□□□□ -0.88
PTP4A1P1-201ENST00000420539 ARHGEF1Q92888 912 aaKnown RBP9.57□□□□□ -0.88
PTP4A1P1-201ENST00000420539 GPHNQ9NQX3 736 aaPredicted RBP9.57□□□□□ -0.88
PTP4A1P1-201ENST00000420539 METRNQ9UJH8 293 aa9.57□□□□□ -0.88
PTP4A1P1-201ENST00000420539 C7P10643 843 aa9.56□□□□□ -0.88
PTP4A1P1-201ENST00000420539 TRIM26Q12899 539 aaPredicted RBP9.56□□□□□ -0.88
PTP4A1P1-201ENST00000420539 L3MBTL3Q96JM7 780 aaPredicted RBP9.56□□□□□ -0.88
PTP4A1P1-201ENST00000420539 DSG2Q14126 1118 aa9.55□□□□□ -0.88
PTP4A1P1-201ENST00000420539 POTEFA5A3E0 1075 aa9.53□□□□□ -0.88
PTP4A1P1-201ENST00000420539 C2orf72A6NCS6 295 aa9.53□□□□□ -0.88
PTP4A1P1-201ENST00000420539 TMEM121BQ9BXQ6 578 aaPredicted RBP9.53□□□□□ -0.88
PTP4A1P1-201ENST00000420539 SEMA3EO15041 775 aa9.52□□□□□ -0.89
PTP4A1P1-201ENST00000420539 UBTFP17480 764 aaKnown RBP9.51□□□□□ -0.89
PTP4A1P1-201ENST00000420539 CAMK2BQ13554 666 aa9.5□□□□□ -0.89
PTP4A1P1-201ENST00000420539 PLPP6Q8IY26 295 aa9.5□□□□□ -0.89
PTP4A1P1-201ENST00000420539 TMEM92Q6UXU6 159 aa9.49□□□□□ -0.89
PTP4A1P1-201ENST00000420539 FOXK1P85037 733 aa9.48□□□□□ -0.89
PTP4A1P1-201ENST00000420539 LMOD2Q6P5Q4 547 aa9.48□□□□□ -0.89
PTP4A1P1-201ENST00000420539 C3orf67Q6ZVT6 689 aa9.48□□□□□ -0.89
PTP4A1P1-201ENST00000420539 DPYSL4O14531 572 aa9.47□□□□□ -0.89
PTP4A1P1-201ENST00000420539 EMILIN3Q9NT22 766 aa9.47□□□□□ -0.89
PTP4A1P1-201ENST00000420539 KIF3CO14782 793 aa9.46□□□□□ -0.9
PTP4A1P1-201ENST00000420539 LHX8Q68G74 356 aa9.46□□□□□ -0.9
PTP4A1P1-201ENST00000420539 TESPA1A2RU30 521 aaPredicted RBP9.45□□□□□ -0.9
PTP4A1P1-201ENST00000420539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTP4A1P1-201ENST00000420539 UPF1Q92900 1129 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTP4A1P1-201ENST00000420539 POTEB2H3BUK9 544 aa9.44□□□□□ -0.9
PTP4A1P1-201ENST00000420539 HRCP23327 699 aa9.44□□□□□ -0.9
PTP4A1P1-201ENST00000420539 ARIH1Q9Y4X5 557 aaPredicted RBP9.43□□□□□ -0.9
PTP4A1P1-201ENST00000420539 TTBK1Q5TCY1 1321 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1P1-201ENST00000420539 MLLT3P42568 568 aaPredicted RBP9.4□□□□□ -0.9
PTP4A1P1-201ENST00000420539 MAP3K9P80192 1104 aa9.39□□□□□ -0.91
PTP4A1P1-201ENST00000420539 SMYD5Q6GMV2 418 aa9.39□□□□□ -0.91
PTP4A1P1-201ENST00000420539 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.38□□□□□ -0.91
PTP4A1P1-201ENST00000420539 POTEJP0CG39 1038 aa9.37□□□□□ -0.91
PTP4A1P1-201ENST00000420539 SPDYE16A6NNV3 312 aaPredicted RBP9.36□□□□□ -0.91
PTP4A1P1-201ENST00000420539 PDIA6Q15084 440 aa9.36□□□□□ -0.91
PTP4A1P1-201ENST00000420539 MYT1Q01538 1121 aa9.34□□□□□ -0.91
PTP4A1P1-201ENST00000420539 RBM26Q5T8P6 1007 aaKnown RBP9.34□□□□□ -0.91
PTP4A1P1-201ENST00000420539 GRXCR2A6NFK2 248 aa9.33□□□□□ -0.92
PTP4A1P1-201ENST00000420539 OXER1Q8TDS5 423 aa9.33□□□□□ -0.92
PTP4A1P1-201ENST00000420539 ZC3H15Q8WU90 426 aaKnown RBP9.32□□□□□ -0.92
PTP4A1P1-201ENST00000420539 MAMSTRQ6ZN01 415 aa9.31□□□□□ -0.92
PTP4A1P1-201ENST00000420539 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
PTP4A1P1-201ENST00000420539 TBC1D12O60347 775 aa9.3□□□□□ -0.92
PTP4A1P1-201ENST00000420539 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
PTP4A1P1-201ENST00000420539 DDX12PQ92771 950 aa9.3□□□□□ -0.92
PTP4A1P1-201ENST00000420539 SCUBE2Q9NQ36 999 aa9.3□□□□□ -0.92
PTP4A1P1-201ENST00000420539 EVI5O60447 810 aa9.29□□□□□ -0.92
PTP4A1P1-201ENST00000420539 GPIHBP1Q8IV16 184 aa9.28□□□□□ -0.92
PTP4A1P1-201ENST00000420539 ZNF316A6NFI3 1004 aaPredicted RBP9.27□□□□□ -0.93
PTP4A1P1-201ENST00000420539 SLAIN1Q8ND83 568 aa9.26□□□□□ -0.93
PTP4A1P1-201ENST00000420539 PTCD2Q8WV60 388 aaKnown RBP9.25□□□□□ -0.93
PTP4A1P1-201ENST00000420539 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
PTP4A1P1-201ENST00000420539 NUTM2FA1L443 756 aa9.23□□□□□ -0.93
PTP4A1P1-201ENST00000420539 SLC34A2O95436 690 aa9.22□□□□□ -0.93
PTP4A1P1-201ENST00000420539 PCDHGA4Q9Y5G9 962 aa9.22□□□□□ -0.93
PTP4A1P1-201ENST00000420539 ZMYND10O75800 440 aa9.21□□□□□ -0.94
PTP4A1P1-201ENST00000420539 OSBPP22059 807 aa9.2□□□□□ -0.94
PTP4A1P1-201ENST00000420539 PTGER2P43116 358 aa9.19□□□□□ -0.94
PTP4A1P1-201ENST00000420539 KRI1Q8N9T8 703 aaKnown RBP9.19□□□□□ -0.94
PTP4A1P1-201ENST00000420539 PRIM1P49642 420 aaKnown RBP9.18□□□□□ -0.94
PTP4A1P1-201ENST00000420539 DOK7Q18PE1 504 aa9.18□□□□□ -0.94
PTP4A1P1-201ENST00000420539 KHSRPQ92945 711 aaKnown RBP eCLIP9.18□□□□□ -0.94
PTP4A1P1-201ENST00000420539 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
PTP4A1P1-201ENST00000420539 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
PTP4A1P1-201ENST00000420539 CCDC9Q9Y3X0 531 aaKnown RBP9.17□□□□□ -0.94
PTP4A1P1-201ENST00000420539 NUDT7P0C024 238 aa9.16□□□□□ -0.94
PTP4A1P1-201ENST00000420539 ARSIQ5FYB1 569 aa9.16□□□□□ -0.94
PTP4A1P1-201ENST00000420539 RIMBP2O15034 1052 aa9.15□□□□□ -0.94
PTP4A1P1-201ENST00000420539 HOXB3P14651 431 aaPredicted RBP9.15□□□□□ -0.94
PTP4A1P1-201ENST00000420539 ZNF710Q8N1W2 664 aa9.15□□□□□ -0.94
PTP4A1P1-201ENST00000420539 ZMYND15Q9H091 742 aa9.15□□□□□ -0.94
PTP4A1P1-201ENST00000420539 ANO8Q9HCE9 1232 aaPredicted RBP9.15□□□□□ -0.94
PTP4A1P1-201ENST00000420539 GPR37O15354 613 aa9.14□□□□□ -0.95
PTP4A1P1-201ENST00000420539 NEUROD2Q15784 382 aa9.14□□□□□ -0.95
PTP4A1P1-201ENST00000420539 MAP3K7O43318 606 aa9.13□□□□□ -0.95
PTP4A1P1-201ENST00000420539 RSPH6AQ9H0K4 717 aa9.13□□□□□ -0.95
PTP4A1P1-201ENST00000420539 LOC105371045A0A1W2PR82 267 aa9.12□□□□□ -0.95
PTP4A1P1-201ENST00000420539 PCDHGA10Q9Y5H3 936 aa9.12□□□□□ -0.95
PTP4A1P1-201ENST00000420539 FCHSD2O94868 740 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms