RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 PREX2Q70Z35 1606 aa34.13■■■■□ 3.05
CPNE1-211ENST00000420363 RICTORQ6R327 1708 aa34.12■■■■□ 3.05
CPNE1-211ENST00000420363 EHBP1L1Q8N3D4 1523 aa34.09■■■■□ 3.05
CPNE1-211ENST00000420363 PTPRMP28827 1452 aa34.08■■■■□ 3.05
CPNE1-211ENST00000420363 CDC42BPBQ9Y5S2 1711 aa34.08■■■■□ 3.05
CPNE1-211ENST00000420363 ADAMTSL3P82987 1691 aa34.07■■■■□ 3.04
CPNE1-211ENST00000420363 ARHGAP5Q13017 1502 aa34.07■■■■□ 3.04
CPNE1-211ENST00000420363 CDC42BPAQ5VT25 1732 aa34.06■■■■□ 3.04
CPNE1-211ENST00000420363 ZMYM4Q5VZL5 1548 aa34.04■■■■□ 3.04
CPNE1-211ENST00000420363 MTUS2Q5JR59 1369 aa34.04■■■■□ 3.04
CPNE1-211ENST00000420363 EFCAB2Q5VUJ9 269 aa34.03■■■■□ 3.04
CPNE1-211ENST00000420363 TIAM1Q13009 1591 aa34.02■■■■□ 3.04
CPNE1-211ENST00000420363 BCORL1Q5H9F3 1711 aa34■■■■□ 3.03
CPNE1-211ENST00000420363 POGZQ7Z3K3 1410 aa33.99■■■■□ 3.03
CPNE1-211ENST00000420363 ARHGEF40Q8TER5 1519 aa33.98■■■■□ 3.03
CPNE1-211ENST00000420363 SCAPERQ9BY12 1400 aa33.96■■■■□ 3.03
CPNE1-211ENST00000420363 MAP3K1Q13233 1512 aa33.95■■■■□ 3.03
CPNE1-211ENST00000420363 ABCC1P33527 1531 aa33.93■■■■□ 3.02
CPNE1-211ENST00000420363 GPATCH8Q9UKJ3 1502 aaKnown RBP33.93■■■■□ 3.02
CPNE1-211ENST00000420363 MADDQ8WXG6 1647 aa33.93■■■■□ 3.02
CPNE1-211ENST00000420363 MAGI2Q86UL8 1455 aa33.92■■■■□ 3.02
CPNE1-211ENST00000420363 ZNF518AQ6AHZ1 1483 aa33.9■■■■□ 3.02
CPNE1-211ENST00000420363 SUPT6HQ7KZ85 1726 aaKnown RBP33.9■■■■□ 3.02
CPNE1-211ENST00000420363 ITSN2Q9NZM3 1697 aa33.9■■■■□ 3.02
CPNE1-211ENST00000420363 ZFYVE16Q7Z3T8 1539 aa33.89■■■■□ 3.02
CPNE1-211ENST00000420363 YEATS2Q9ULM3 1422 aa33.89■■■■□ 3.02
CPNE1-211ENST00000420363 KDM5CP41229 1560 aa33.89■■■■□ 3.02
CPNE1-211ENST00000420363 CCNB3Q8WWL7 1395 aa33.85■■■■□ 3.01
CPNE1-211ENST00000420363 PLPPR3Q6T4P5 718 aa33.85■■■■□ 3.01
CPNE1-211ENST00000420363 LRRC9Q6ZRR7 1453 aa33.84■■■■□ 3.01
CPNE1-211ENST00000420363 MLECQ14165 292 aa33.84■■■■□ 3.01
CPNE1-211ENST00000420363 SAMD9LQ8IVG5 1584 aa33.84■■■■□ 3.01
CPNE1-211ENST00000420363 RIMS1Q86UR5 1692 aaKnown RBP33.8■■■■□ 3
CPNE1-211ENST00000420363 NCOA2Q15596 1464 aa33.8■■■■□ 3
CPNE1-211ENST00000420363 ARHGEF12Q9NZN5 1544 aa33.79■■■■□ 3
CPNE1-211ENST00000420363 PLEKHH2Q8IVE3 1493 aa33.78■■■■□ 3
CPNE1-211ENST00000420363 SYCP2Q9BX26 1530 aa33.74■■■□□ 2.99
CPNE1-211ENST00000420363 KIAA1107Q9UPP5 1409 aa33.74■■■□□ 2.99
CPNE1-211ENST00000420363 ATP10AO60312 1499 aa33.74■■■□□ 2.99
CPNE1-211ENST00000420363 CFDP1Q9UEE9 299 aaPredicted RBP33.73■■■□□ 2.99
CPNE1-211ENST00000420363 MYT1LQ9UL68 1186 aa33.73■■■□□ 2.99
CPNE1-211ENST00000420363 LMTK3Q96Q04 1460 aa33.73■■■□□ 2.99
CPNE1-211ENST00000420363 AFAP1Q8N556 730 aa33.72■■■□□ 2.99
CPNE1-211ENST00000420363 TRAPPC8Q9Y2L5 1435 aa33.71■■■□□ 2.99
CPNE1-211ENST00000420363 MLH3Q9UHC1 1453 aa33.71■■■□□ 2.99
CPNE1-211ENST00000420363 SIGLEC1Q9BZZ2 1709 aa33.7■■■□□ 2.98
CPNE1-211ENST00000420363 C9orf84Q5VXU9 1444 aa33.69■■■□□ 2.98
CPNE1-211ENST00000420363 HSPA2P54652 639 aa33.66■■■□□ 2.98
CPNE1-211ENST00000420363 REREQ9P2R6 1566 aa33.65■■■□□ 2.98
CPNE1-211ENST00000420363 DIP2CQ9Y2E4 1556 aa33.65■■■□□ 2.98
CPNE1-211ENST00000420363 FBXO41Q8TF61 875 aa33.64■■■□□ 2.98
CPNE1-211ENST00000420363 ZNF777Q9ULD5 760 aaPredicted RBP33.64■■■□□ 2.98
CPNE1-211ENST00000420363 ABCA6Q8N139 1617 aa33.63■■■□□ 2.97
CPNE1-211ENST00000420363 KIDINS220Q9ULH0 1771 aa33.62■■■□□ 2.97
CPNE1-211ENST00000420363 APLP2Q06481 763 aa33.61■■■□□ 2.97
CPNE1-211ENST00000420363 KANK4Q5T7N3 995 aaPredicted RBP33.61■■■□□ 2.97
CPNE1-211ENST00000420363 FER1L4A9Z1Z3 1794 aa33.59■■■□□ 2.97
CPNE1-211ENST00000420363 INO80Q9ULG1 1556 aaPredicted RBP33.58■■■□□ 2.97
CPNE1-211ENST00000420363 CAMSAP2Q08AD1 1489 aa33.56■■■□□ 2.96
CPNE1-211ENST00000420363 MBD5Q9P267 1494 aa33.56■■■□□ 2.96
CPNE1-211ENST00000420363 ATP7AQ04656 1500 aa33.53■■■□□ 2.96
CPNE1-211ENST00000420363 CEBPAP49715 358 aaPredicted RBP33.53■■■□□ 2.96
CPNE1-211ENST00000420363 MYOM3Q5VTT5 1437 aa33.53■■■□□ 2.96
CPNE1-211ENST00000420363 HNRNPMP52272 730 aaKnown RBP eCLIP33.52■■■□□ 2.961e-7■■■■□ 25.4
CPNE1-211ENST00000420363 MIA2Q96PC5 1412 aa33.51■■■□□ 2.95
CPNE1-211ENST00000420363 ZNF644Q9H582 1327 aaPredicted RBP33.5■■■□□ 2.95
CPNE1-211ENST00000420363 ARHGEF5Q12774 1597 aa33.49■■■□□ 2.95
CPNE1-211ENST00000420363 AGLP35573 1532 aa33.48■■■□□ 2.95
CPNE1-211ENST00000420363 CCDC141Q6ZP82 1450 aa33.48■■■□□ 2.95
CPNE1-211ENST00000420363 SPAG9O60271 1321 aaKnown RBP33.48■■■□□ 2.95
CPNE1-211ENST00000420363 ESF1Q9H501 851 aaKnown RBP33.44■■■□□ 2.94
CPNE1-211ENST00000420363 RTEL1-TNFRSF6BF6WH68 1400 aa33.43■■■□□ 2.94
CPNE1-211ENST00000420363 RSPH4AQ5TD94 716 aa33.41■■■□□ 2.94
CPNE1-211ENST00000420363 PLXNC1O60486 1568 aa33.41■■■□□ 2.94
CPNE1-211ENST00000420363 ADGBQ8N7X0 1667 aa33.41■■■□□ 2.94
CPNE1-211ENST00000420363 PTPN23Q9H3S7 1636 aa33.34■■■□□ 2.93
CPNE1-211ENST00000420363 PREX1Q8TCU6 1659 aa33.33■■■□□ 2.93
CPNE1-211ENST00000420363 A2MP01023 1474 aa33.33■■■□□ 2.93
CPNE1-211ENST00000420363 MAST1Q9Y2H9 1570 aa33.33■■■□□ 2.93
CPNE1-211ENST00000420363 UHRF1BP1Q6BDS2 1440 aa33.31■■■□□ 2.92
CPNE1-211ENST00000420363 FGD6Q6ZV73 1430 aa33.31■■■□□ 2.92
CPNE1-211ENST00000420363 CERKQ8TCT0 537 aa33.29■■■□□ 2.92
CPNE1-211ENST00000420363 DMRT2Q9Y5R5 561 aa33.29■■■□□ 2.92
CPNE1-211ENST00000420363 TCOF1Q13428 1488 aaKnown RBP33.29■■■□□ 2.92
CPNE1-211ENST00000420363 SETD1BQ9UPS6 1966 aaKnown RBP33.28■■■□□ 2.92
CPNE1-211ENST00000420363 CROCC2H7BZ55 1655 aa33.25■■■□□ 2.91
CPNE1-211ENST00000420363 SHANK2Q9UPX8 1470 aa33.23■■■□□ 2.91
CPNE1-211ENST00000420363 CNTLNQ9NXG0 1405 aa33.22■■■□□ 2.91
CPNE1-211ENST00000420363 TSPY4P0CV99 314 aa33.21■■■□□ 2.91
CPNE1-211ENST00000420363 TSPY10P0CW01 314 aa33.21■■■□□ 2.91
CPNE1-211ENST00000420363 DNMT1P26358 1616 aaKnown RBP33.2■■■□□ 2.91
CPNE1-211ENST00000420363 C3P01024 1663 aa33.19■■■□□ 2.9
CPNE1-211ENST00000420363 DHX29Q7Z478 1369 aaKnown RBP33.19■■■□□ 2.9
CPNE1-211ENST00000420363 MROH2AA6NES4 1674 aa33.15■■■□□ 2.9
CPNE1-211ENST00000420363 ABCC5O15440 1437 aa33.13■■■□□ 2.89
CPNE1-211ENST00000420363 DAPK1P53355 1430 aa33.12■■■□□ 2.89
CPNE1-211ENST00000420363 STRCQ7RTU9 1775 aa33.11■■■□□ 2.89
CPNE1-211ENST00000420363 ZMYM3Q14202 1370 aa33.1■■■□□ 2.89
CPNE1-211ENST00000420363 FAM135AQ9P2D6 1515 aa33.1■■■□□ 2.89
CPNE1-211ENST00000420363 EIF2AK4Q9P2K8 1649 aaKnown RBP33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms