RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 MAP3K1Q13233 1512 aa26.23■■□□□ 1.79
SEC22C-206ENST00000420163 SUPT6HQ7KZ85 1726 aaKnown RBP26.21■■□□□ 1.79
SEC22C-206ENST00000420163 ADGRL1O94910 1474 aa26.2■■□□□ 1.78
SEC22C-206ENST00000420163 LRRC9Q6ZRR7 1453 aa26.2■■□□□ 1.78
SEC22C-206ENST00000420163 RAPGEF3O95398 923 aa26.2■■□□□ 1.78
SEC22C-206ENST00000420163 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
SEC22C-206ENST00000420163 DENND4BO75064 1496 aaPredicted RBP26.18■■□□□ 1.78
SEC22C-206ENST00000420163 EFCAB2Q5VUJ9 269 aa26.18■■□□□ 1.78
SEC22C-206ENST00000420163 SCAPERQ9BY12 1400 aa26.15■■□□□ 1.78
SEC22C-206ENST00000420163 NCOA2Q15596 1464 aa26.15■■□□□ 1.78
SEC22C-206ENST00000420163 ITSN2Q9NZM3 1697 aa26.15■■□□□ 1.78
SEC22C-206ENST00000420163 CCNB3Q8WWL7 1395 aa26.14■■□□□ 1.78
SEC22C-206ENST00000420163 SAMD9LQ8IVG5 1584 aa26.14■■□□□ 1.78
SEC22C-206ENST00000420163 ABCC1P33527 1531 aa26.14■■□□□ 1.77
SEC22C-206ENST00000420163 KANK4Q5T7N3 995 aaPredicted RBP26.13■■□□□ 1.77
SEC22C-206ENST00000420163 POGZQ7Z3K3 1410 aa26.12■■□□□ 1.77
SEC22C-206ENST00000420163 ZMYM4Q5VZL5 1548 aa26.1■■□□□ 1.77
SEC22C-206ENST00000420163 ARHGEF12Q9NZN5 1544 aa26.09■■□□□ 1.77
SEC22C-206ENST00000420163 ARHGEF40Q8TER5 1519 aa26.05■■□□□ 1.76
SEC22C-206ENST00000420163 SYCP2Q9BX26 1530 aa26.04■■□□□ 1.76
SEC22C-206ENST00000420163 KDM5CP41229 1560 aa26.04■■□□□ 1.76
SEC22C-206ENST00000420163 CFDP1Q9UEE9 299 aaPredicted RBP26.04■■□□□ 1.76
SEC22C-206ENST00000420163 ZNF777Q9ULD5 760 aaPredicted RBP26.04■■□□□ 1.76
SEC22C-206ENST00000420163 APLP2Q06481 763 aa26.03■■□□□ 1.76
SEC22C-206ENST00000420163 TRAPPC8Q9Y2L5 1435 aa26.02■■□□□ 1.76
SEC22C-206ENST00000420163 ZNF518AQ6AHZ1 1483 aa26.02■■□□□ 1.76
SEC22C-206ENST00000420163 ZFYVE16Q7Z3T8 1539 aa26.01■■□□□ 1.75
SEC22C-206ENST00000420163 YEATS2Q9ULM3 1422 aa25.99■■□□□ 1.75
SEC22C-206ENST00000420163 AFAP1Q8N556 730 aa25.99■■□□□ 1.75
SEC22C-206ENST00000420163 ZNF644Q9H582 1327 aaPredicted RBP25.98■■□□□ 1.75
SEC22C-206ENST00000420163 HECW2Q9P2P5 1572 aa25.98■■□□□ 1.75
SEC22C-206ENST00000420163 MAGI2Q86UL8 1455 aa25.97■■□□□ 1.75
SEC22C-206ENST00000420163 SIGLEC1Q9BZZ2 1709 aa25.97■■□□□ 1.75
SEC22C-206ENST00000420163 PLEKHH2Q8IVE3 1493 aa25.96■■□□□ 1.75
SEC22C-206ENST00000420163 CAMSAP2Q08AD1 1489 aa25.94■■□□□ 1.74
SEC22C-206ENST00000420163 KIAA1107Q9UPP5 1409 aa25.94■■□□□ 1.74
SEC22C-206ENST00000420163 HNRNPMP52272 730 aaKnown RBP eCLIP25.93■■□□□ 1.74
SEC22C-206ENST00000420163 KIDINS220Q9ULH0 1771 aa25.92■■□□□ 1.74
SEC22C-206ENST00000420163 ABCA6Q8N139 1617 aa25.92■■□□□ 1.74
SEC22C-206ENST00000420163 MYOM3Q5VTT5 1437 aa25.92■■□□□ 1.74
SEC22C-206ENST00000420163 DIP2CQ9Y2E4 1556 aa25.9■■□□□ 1.74
SEC22C-206ENST00000420163 MBD5Q9P267 1494 aa25.9■■□□□ 1.74
SEC22C-206ENST00000420163 MLH3Q9UHC1 1453 aa25.9■■□□□ 1.74
SEC22C-206ENST00000420163 KDM4FA0A1W2PPD8 638 aa25.89■■□□□ 1.74
SEC22C-206ENST00000420163 INO80Q9ULG1 1556 aaPredicted RBP25.87■■□□□ 1.73
SEC22C-206ENST00000420163 ATP10AO60312 1499 aa25.85■■□□□ 1.73
SEC22C-206ENST00000420163 BCORL1Q5H9F3 1711 aa25.84■■□□□ 1.73
SEC22C-206ENST00000420163 MIA2Q96PC5 1412 aa25.84■■□□□ 1.73
SEC22C-206ENST00000420163 ATP7AQ04656 1500 aa25.83■■□□□ 1.73
SEC22C-206ENST00000420163 ARHGEF5Q12774 1597 aa25.82■■□□□ 1.72
SEC22C-206ENST00000420163 PTPN23Q9H3S7 1636 aa25.82■■□□□ 1.72
SEC22C-206ENST00000420163 C9orf84Q5VXU9 1444 aa25.81■■□□□ 1.72
SEC22C-206ENST00000420163 MYT1LQ9UL68 1186 aa25.81■■□□□ 1.72
SEC22C-206ENST00000420163 CCDC141Q6ZP82 1450 aa25.8■■□□□ 1.72
SEC22C-206ENST00000420163 SPAG9O60271 1321 aaKnown RBP25.8■■□□□ 1.72
SEC22C-206ENST00000420163 ADAMTSL3P82987 1691 aa25.8■■□□□ 1.72
SEC22C-206ENST00000420163 FGD6Q6ZV73 1430 aa25.79■■□□□ 1.72
SEC22C-206ENST00000420163 REREQ9P2R6 1566 aa25.78■■□□□ 1.72
SEC22C-206ENST00000420163 ARID4BQ4LE39 1312 aaPredicted RBP25.77■■□□□ 1.72
SEC22C-206ENST00000420163 PPARGC1BQ86YN6 1023 aaKnown RBP25.76■■□□□ 1.71
SEC22C-206ENST00000420163 MADDQ8WXG6 1647 aa25.74■■□□□ 1.71
SEC22C-206ENST00000420163 TCOF1Q13428 1488 aaKnown RBP25.74■■□□□ 1.71
SEC22C-206ENST00000420163 ADGBQ8N7X0 1667 aa25.74■■□□□ 1.71
SEC22C-206ENST00000420163 CROCC2H7BZ55 1655 aa25.72■■□□□ 1.71
SEC22C-206ENST00000420163 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
SEC22C-206ENST00000420163 RTEL1-TNFRSF6BF6WH68 1400 aa25.7■■□□□ 1.7
SEC22C-206ENST00000420163 PLXNC1O60486 1568 aa25.69■■□□□ 1.7
SEC22C-206ENST00000420163 MAST1Q9Y2H9 1570 aa25.69■■□□□ 1.7
SEC22C-206ENST00000420163 AGLP35573 1532 aa25.68■■□□□ 1.7
SEC22C-206ENST00000420163 RIMS1Q86UR5 1692 aaKnown RBP25.68■■□□□ 1.7
SEC22C-206ENST00000420163 DNMT1P26358 1616 aaKnown RBP25.68■■□□□ 1.7
SEC22C-206ENST00000420163 FER1L4A9Z1Z3 1794 aa25.68■■□□□ 1.7
SEC22C-206ENST00000420163 RSPH4AQ5TD94 716 aa25.67■■□□□ 1.7
SEC22C-206ENST00000420163 MLECQ14165 292 aa25.66■■□□□ 1.7
SEC22C-206ENST00000420163 A2MP01023 1474 aa25.66■■□□□ 1.7
SEC22C-206ENST00000420163 ABCC5O15440 1437 aa25.63■■□□□ 1.69
SEC22C-206ENST00000420163 DAPK1P53355 1430 aa25.62■■□□□ 1.69
SEC22C-206ENST00000420163 TSPY4P0CV99 314 aa25.6■■□□□ 1.69
SEC22C-206ENST00000420163 TSPY10P0CW01 314 aa25.6■■□□□ 1.69
SEC22C-206ENST00000420163 PTPRMP28827 1452 aa25.6■■□□□ 1.69
SEC22C-206ENST00000420163 SHANK2Q9UPX8 1470 aa25.6■■□□□ 1.69
SEC22C-206ENST00000420163 FAM50AQ14320 339 aaKnown RBP25.56■■□□□ 1.68
SEC22C-206ENST00000420163 DHX29Q7Z478 1369 aaKnown RBP25.55■■□□□ 1.68
SEC22C-206ENST00000420163 CHIC2Q9UKJ5 165 aa25.47■■□□□ 1.67
SEC22C-206ENST00000420163 CLTCQ00610 1675 aaKnown RBP25.47■■□□□ 1.67
SEC22C-206ENST00000420163 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
SEC22C-206ENST00000420163 PTPRKQ15262 1439 aa25.46■■□□□ 1.67
SEC22C-206ENST00000420163 C3P01024 1663 aa25.46■■□□□ 1.67
SEC22C-206ENST00000420163 EIF2AK4Q9P2K8 1649 aaKnown RBP25.46■■□□□ 1.67
SEC22C-206ENST00000420163 KIF15Q9NS87 1388 aa25.45■■□□□ 1.67
SEC22C-206ENST00000420163 ADGRL2O95490 1459 aa25.45■■□□□ 1.66
SEC22C-206ENST00000420163 RRBP1Q9P2E9 1410 aaKnown RBP25.45■■□□□ 1.66
SEC22C-206ENST00000420163 MROH2AA6NES4 1674 aa25.44■■□□□ 1.66
SEC22C-206ENST00000420163 RNF17Q9BXT8 1623 aaKnown RBP25.44■■□□□ 1.66
SEC22C-206ENST00000420163 KIF3BO15066 747 aa25.43■■□□□ 1.66
SEC22C-206ENST00000420163 GGT6Q6P531 493 aa25.43■■□□□ 1.66
SEC22C-206ENST00000420163 PLPPR3Q6T4P5 718 aa25.43■■□□□ 1.66
SEC22C-206ENST00000420163 RRP7BPQ9NSQ0 103 aa25.42■■□□□ 1.66
SEC22C-206ENST00000420163 NCOA1Q15788 1441 aa25.42■■□□□ 1.66
SEC22C-206ENST00000420163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms