RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 TMEM92Q6UXU6 159 aa10.87□□□□□ -0.67
SEMA3A-202ENST00000420047 NLRP6P59044 892 aa10.85□□□□□ -0.67
SEMA3A-202ENST00000420047 BCL11BQ9C0K0 894 aaPredicted RBP10.81□□□□□ -0.68
SEMA3A-202ENST00000420047 GPR153Q6NV75 609 aa10.8□□□□□ -0.68
SEMA3A-202ENST00000420047 FBXO22Q8NEZ5 403 aa10.8□□□□□ -0.68
SEMA3A-202ENST00000420047 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
SEMA3A-202ENST00000420047 STK24Q9Y6E0 443 aa10.77□□□□□ -0.69
SEMA3A-202ENST00000420047 ZNF687Q8N1G0 1237 aa10.76□□□□□ -0.69
SEMA3A-202ENST00000420047 STK25O00506 426 aa10.73□□□□□ -0.69
SEMA3A-202ENST00000420047 ECM2O94769 699 aaPredicted RBP10.73□□□□□ -0.69
SEMA3A-202ENST00000420047 MFRPQ9BY79 579 aa10.73□□□□□ -0.69
SEMA3A-202ENST00000420047 ARSIQ5FYB1 569 aa10.71□□□□□ -0.69
SEMA3A-202ENST00000420047 KIF3CO14782 793 aa10.68□□□□□ -0.7
SEMA3A-202ENST00000420047 ZNF316A6NFI3 1004 aaPredicted RBP10.66□□□□□ -0.7
SEMA3A-202ENST00000420047 PTGER2P43116 358 aa10.66□□□□□ -0.7
SEMA3A-202ENST00000420047 RNF166Q96A37 237 aaPredicted RBP10.66□□□□□ -0.7
SEMA3A-202ENST00000420047 PKD2Q13563 968 aa10.65□□□□□ -0.7
SEMA3A-202ENST00000420047 MYT1LQ9UL68 1186 aa10.65□□□□□ -0.7
SEMA3A-202ENST00000420047 C2orf72A6NCS6 295 aa10.64□□□□□ -0.71
SEMA3A-202ENST00000420047 RGL2O15211 777 aa10.62□□□□□ -0.71
SEMA3A-202ENST00000420047 SLC34A2O95436 690 aa10.62□□□□□ -0.71
SEMA3A-202ENST00000420047 KHSRPQ92945 711 aaKnown RBP eCLIP10.62□□□□□ -0.71
SEMA3A-202ENST00000420047 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
SEMA3A-202ENST00000420047 PBX2P40425 430 aa10.57□□□□□ -0.72
SEMA3A-202ENST00000420047 ANKRD13DQ6ZTN6 518 aa10.57□□□□□ -0.72
SEMA3A-202ENST00000420047 PCDHGA4Q9Y5G9 962 aa10.56□□□□□ -0.72
SEMA3A-202ENST00000420047 NUDT7P0C024 238 aa10.55□□□□□ -0.72
SEMA3A-202ENST00000420047 LSM11P83369 360 aaKnown RBP eCLIP10.55□□□□□ -0.72
SEMA3A-202ENST00000420047 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
SEMA3A-202ENST00000420047 PPP1R37O75864 691 aa10.51□□□□□ -0.73
SEMA3A-202ENST00000420047 PSDA5PKW4 1024 aaPredicted RBP10.49□□□□□ -0.73
SEMA3A-202ENST00000420047 HS6ST3Q8IZP7 471 aa10.46□□□□□ -0.73
SEMA3A-202ENST00000420047 PTCD2Q8WV60 388 aaKnown RBP10.46□□□□□ -0.73
SEMA3A-202ENST00000420047 FOXK1P85037 733 aa10.45□□□□□ -0.74
SEMA3A-202ENST00000420047 POTEEQ6S8J3 1075 aa10.45□□□□□ -0.74
SEMA3A-202ENST00000420047 KDM4FA0A1W2PPD8 638 aa10.44□□□□□ -0.74
SEMA3A-202ENST00000420047 ARHGAP33O14559 1287 aa10.43□□□□□ -0.74
SEMA3A-202ENST00000420047 GPHNQ9NQX3 736 aaPredicted RBP10.43□□□□□ -0.74
SEMA3A-202ENST00000420047 AXIN2Q9Y2T1 843 aa10.43□□□□□ -0.74
SEMA3A-202ENST00000420047 TBC1D12O60347 775 aa10.4□□□□□ -0.74
SEMA3A-202ENST00000420047 PLPP6Q8IY26 295 aa10.4□□□□□ -0.74
SEMA3A-202ENST00000420047 ADGRD1Q6QNK2 874 aa10.38□□□□□ -0.75
SEMA3A-202ENST00000420047 TK2O00142 265 aa10.37□□□□□ -0.75
SEMA3A-202ENST00000420047 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
SEMA3A-202ENST00000420047 DSG2Q14126 1118 aa10.36□□□□□ -0.75
SEMA3A-202ENST00000420047 RYDENQ9NUL5 291 aaKnown RBP10.36□□□□□ -0.75
SEMA3A-202ENST00000420047 HCSTQ9UBK5 93 aa10.36□□□□□ -0.75
SEMA3A-202ENST00000420047 CHGAP10645 457 aaKnown RBP10.34□□□□□ -0.75
SEMA3A-202ENST00000420047 PPP4R3BQ5MIZ7 849 aa10.34□□□□□ -0.75
SEMA3A-202ENST00000420047 HRO43593 1189 aa10.3□□□□□ -0.76
SEMA3A-202ENST00000420047 PSEN2P49810 448 aa10.29□□□□□ -0.76
SEMA3A-202ENST00000420047 DMRTA1Q5VZB9 504 aa10.29□□□□□ -0.76
SEMA3A-202ENST00000420047 OXER1Q8TDS5 423 aa10.28□□□□□ -0.76
SEMA3A-202ENST00000420047 KCNH8Q96L42 1107 aa10.28□□□□□ -0.76
SEMA3A-202ENST00000420047 NKX1-1Q15270 411 aaPredicted RBP10.27□□□□□ -0.77
SEMA3A-202ENST00000420047 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
SEMA3A-202ENST00000420047 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
SEMA3A-202ENST00000420047 STAC3Q96MF2 364 aa10.25□□□□□ -0.77
SEMA3A-202ENST00000420047 PPP1R15BQ5SWA1 713 aa10.22□□□□□ -0.77
SEMA3A-202ENST00000420047 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
SEMA3A-202ENST00000420047 PDE4AP27815 886 aa10.21□□□□□ -0.77
SEMA3A-202ENST00000420047 SLC4A5Q9BY07 1137 aa10.21□□□□□ -0.77
SEMA3A-202ENST00000420047 UPF1Q92900 1129 aaKnown RBP eCLIP10.2□□□□□ -0.78
SEMA3A-202ENST00000420047 BCL2L12Q9HB09 334 aa10.2□□□□□ -0.78
SEMA3A-202ENST00000420047 ZNF454Q8N9F8 522 aa10.19□□□□□ -0.78
SEMA3A-202ENST00000420047 KCTD12Q96CX2 325 aaKnown RBP10.19□□□□□ -0.78
SEMA3A-202ENST00000420047 VPS9D1Q9Y2B5 631 aa10.19□□□□□ -0.78
SEMA3A-202ENST00000420047 ANO8Q9HCE9 1232 aaPredicted RBP10.18□□□□□ -0.78
SEMA3A-202ENST00000420047 NCKAP5LQ9HCH0 1330 aa10.17□□□□□ -0.78
SEMA3A-202ENST00000420047 FOSBP53539 338 aa10.17□□□□□ -0.78
SEMA3A-202ENST00000420047 PTPREP23469 700 aa10.15□□□□□ -0.78
SEMA3A-202ENST00000420047 GTPBP6O43824 516 aaPredicted RBP10.13□□□□□ -0.79
SEMA3A-202ENST00000420047 JPH4Q96JJ6 628 aa10.13□□□□□ -0.79
SEMA3A-202ENST00000420047 EVI5O60447 810 aa10.12□□□□□ -0.79
SEMA3A-202ENST00000420047 BHMG1C9JSJ3 638 aaPredicted RBP10.11□□□□□ -0.79
SEMA3A-202ENST00000420047 DDX27Q96GQ7 796 aaKnown RBP10.11□□□□□ -0.79
SEMA3A-202ENST00000420047 ZDHHC16Q969W1 377 aa10.1□□□□□ -0.79
SEMA3A-202ENST00000420047 LARP6Q9BRS8 491 aaKnown RBP10.1□□□□□ -0.79
SEMA3A-202ENST00000420047 MFSD10Q14728 455 aa10.09□□□□□ -0.79
SEMA3A-202ENST00000420047 ZBED2Q9BTP6 218 aa10.09□□□□□ -0.79
SEMA3A-202ENST00000420047 MAP3K9P80192 1104 aa10.08□□□□□ -0.8
SEMA3A-202ENST00000420047 PTPN5P54829 565 aa10.07□□□□□ -0.8
SEMA3A-202ENST00000420047 IFFO2Q5TF58 517 aa10.07□□□□□ -0.8
SEMA3A-202ENST00000420047 GOLGA8CPA6NN73 597 aa10.06□□□□□ -0.8
SEMA3A-202ENST00000420047 MRPL50Q8N5N7 158 aaKnown RBP10.06□□□□□ -0.8
SEMA3A-202ENST00000420047 THSD4Q6ZMP0 1018 aa10.05□□□□□ -0.8
SEMA3A-202ENST00000420047 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
SEMA3A-202ENST00000420047 NBPF3Q9H094 633 aa10.04□□□□□ -0.8
SEMA3A-202ENST00000420047 RGS20O76081 388 aa10.03□□□□□ -0.8
SEMA3A-202ENST00000420047 WNT2BQ93097 391 aa10.03□□□□□ -0.8
SEMA3A-202ENST00000420047 EMILIN3Q9NT22 766 aa10.01□□□□□ -0.81
SEMA3A-202ENST00000420047 PPP1R3GB7ZBB8 358 aa10□□□□□ -0.81
SEMA3A-202ENST00000420047 FBXW7Q969H0 707 aa9.99□□□□□ -0.81
SEMA3A-202ENST00000420047 PCDHGA10Q9Y5H3 936 aa9.99□□□□□ -0.81
SEMA3A-202ENST00000420047 RABGEF1Q9UJ41 708 aa9.98□□□□□ -0.81
SEMA3A-202ENST00000420047 PHF14O94880 888 aa9.97□□□□□ -0.81
SEMA3A-202ENST00000420047 TYW1BQ6NUM6 668 aa9.96□□□□□ -0.82
SEMA3A-202ENST00000420047 DCAF8L2P0C7V8 631 aa9.95□□□□□ -0.82
SEMA3A-202ENST00000420047 A0A0G2JS52 829 aa9.93□□□□□ -0.82
SEMA3A-202ENST00000420047 ONECUT3O60422 494 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms