RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 POGZQ7Z3K3 1410 aa33.36■■■□□ 2.93
MCF2L-212ENST00000420013 CASKIN1Q8WXD9 1431 aa33.36■■■□□ 2.93
MCF2L-212ENST00000420013 MADDQ8WXG6 1647 aa33.34■■■□□ 2.93
MCF2L-212ENST00000420013 FYCO1Q9BQS8 1478 aa33.32■■■□□ 2.92
MCF2L-212ENST00000420013 PTPRMP28827 1452 aa33.31■■■□□ 2.92
MCF2L-212ENST00000420013 SCAPERQ9BY12 1400 aa33.28■■■□□ 2.92
MCF2L-212ENST00000420013 PREX2Q70Z35 1606 aa33.27■■■□□ 2.92
MCF2L-212ENST00000420013 ARHGAP5Q13017 1502 aa33.27■■■□□ 2.92
MCF2L-212ENST00000420013 EFCAB2Q5VUJ9 269 aa33.24■■■□□ 2.91
MCF2L-212ENST00000420013 YEATS2Q9ULM3 1422 aa33.24■■■□□ 2.91
MCF2L-212ENST00000420013 CDC42BPBQ9Y5S2 1711 aa33.24■■■□□ 2.91
MCF2L-212ENST00000420013 ZNF518AQ6AHZ1 1483 aa33.23■■■□□ 2.91
MCF2L-212ENST00000420013 ARID4BQ4LE39 1312 aaPredicted RBP33.23■■■□□ 2.91
MCF2L-212ENST00000420013 RIMS1Q86UR5 1692 aaKnown RBP33.23■■■□□ 2.91
MCF2L-212ENST00000420013 SIGLEC1Q9BZZ2 1709 aa33.22■■■□□ 2.91
MCF2L-212ENST00000420013 KDM5CP41229 1560 aa33.21■■■□□ 2.91
MCF2L-212ENST00000420013 CDC42BPAQ5VT25 1732 aa33.14■■■□□ 2.9
MCF2L-212ENST00000420013 FER1L4A9Z1Z3 1794 aa33.14■■■□□ 2.9
MCF2L-212ENST00000420013 C9orf84Q5VXU9 1444 aa33.13■■■□□ 2.89
MCF2L-212ENST00000420013 ABCC1P33527 1531 aa33.12■■■□□ 2.89
MCF2L-212ENST00000420013 ITSN2Q9NZM3 1697 aa33.11■■■□□ 2.89
MCF2L-212ENST00000420013 ATP10AO60312 1499 aa33.11■■■□□ 2.89
MCF2L-212ENST00000420013 REREQ9P2R6 1566 aa33.08■■■□□ 2.89
MCF2L-212ENST00000420013 ARHGEF12Q9NZN5 1544 aa33.05■■■□□ 2.88
MCF2L-212ENST00000420013 DIP2CQ9Y2E4 1556 aa33.04■■■□□ 2.88
MCF2L-212ENST00000420013 MLH3Q9UHC1 1453 aa33.01■■■□□ 2.88
MCF2L-212ENST00000420013 LMTK3Q96Q04 1460 aa33■■■□□ 2.87
MCF2L-212ENST00000420013 ABCA6Q8N139 1617 aa33■■■□□ 2.87
MCF2L-212ENST00000420013 SAMD9LQ8IVG5 1584 aa32.94■■■□□ 2.86
MCF2L-212ENST00000420013 AFAP1Q8N556 730 aa32.92■■■□□ 2.86
MCF2L-212ENST00000420013 TRAPPC8Q9Y2L5 1435 aa32.92■■■□□ 2.86
MCF2L-212ENST00000420013 KIDINS220Q9ULH0 1771 aa32.91■■■□□ 2.86
MCF2L-212ENST00000420013 CEP162Q5TB80 1403 aa32.91■■■□□ 2.86
MCF2L-212ENST00000420013 EHBP1L1Q8N3D4 1523 aa32.91■■■□□ 2.86
MCF2L-212ENST00000420013 GPATCH8Q9UKJ3 1502 aaKnown RBP32.91■■■□□ 2.86
MCF2L-212ENST00000420013 AGLP35573 1532 aa32.9■■■□□ 2.86
MCF2L-212ENST00000420013 SYCP2Q9BX26 1530 aa32.88■■■□□ 2.85
MCF2L-212ENST00000420013 PLEKHH2Q8IVE3 1493 aa32.86■■■□□ 2.85
MCF2L-212ENST00000420013 MTUS2Q5JR59 1369 aa32.86■■■□□ 2.85
MCF2L-212ENST00000420013 MLECQ14165 292 aa32.86■■■□□ 2.85
MCF2L-212ENST00000420013 PREX1Q8TCU6 1659 aa32.85■■■□□ 2.85
MCF2L-212ENST00000420013 MYT1LQ9UL68 1186 aa32.82■■■□□ 2.84
MCF2L-212ENST00000420013 TIAM1Q13009 1591 aa32.8■■■□□ 2.84
MCF2L-212ENST00000420013 KIAA1107Q9UPP5 1409 aa32.8■■■□□ 2.84
MCF2L-212ENST00000420013 CCNB3Q8WWL7 1395 aa32.8■■■□□ 2.84
MCF2L-212ENST00000420013 INO80Q9ULG1 1556 aaPredicted RBP32.79■■■□□ 2.84
MCF2L-212ENST00000420013 ILDR1Q86SU0 546 aaPredicted RBP32.76■■■□□ 2.83
MCF2L-212ENST00000420013 ATP7AQ04656 1500 aa32.76■■■□□ 2.83
MCF2L-212ENST00000420013 C3P01024 1663 aa32.72■■■□□ 2.83
MCF2L-212ENST00000420013 SETD1BQ9UPS6 1966 aaKnown RBP32.71■■■□□ 2.83
MCF2L-212ENST00000420013 CFDP1Q9UEE9 299 aaPredicted RBP32.71■■■□□ 2.83
MCF2L-212ENST00000420013 ZNF777Q9ULD5 760 aaPredicted RBP32.71■■■□□ 2.83
MCF2L-212ENST00000420013 SUPT6HQ7KZ85 1726 aaKnown RBP32.7■■■□□ 2.83
MCF2L-212ENST00000420013 PLXNC1O60486 1568 aa32.7■■■□□ 2.82
MCF2L-212ENST00000420013 MROH2AA6NES4 1674 aa32.69■■■□□ 2.82
MCF2L-212ENST00000420013 PLPPR3Q6T4P5 718 aa32.68■■■□□ 2.82
MCF2L-212ENST00000420013 CNTLNQ9NXG0 1405 aa32.68■■■□□ 2.82
MCF2L-212ENST00000420013 SPAG9O60271 1321 aaKnown RBP32.67■■■□□ 2.82
MCF2L-212ENST00000420013 ADGBQ8N7X0 1667 aa32.66■■■□□ 2.82
MCF2L-212ENST00000420013 UHRF1BP1Q6BDS2 1440 aa32.62■■■□□ 2.81
MCF2L-212ENST00000420013 VPS8Q8N3P4 1428 aa32.6■■■□□ 2.81
MCF2L-212ENST00000420013 HNRNPMP52272 730 aaKnown RBP eCLIP32.6■■■□□ 2.81
MCF2L-212ENST00000420013 HSPA2P54652 639 aa32.6■■■□□ 2.81
MCF2L-212ENST00000420013 ESF1Q9H501 851 aaKnown RBP32.58■■■□□ 2.81
MCF2L-212ENST00000420013 A2MP01023 1474 aa32.58■■■□□ 2.81
MCF2L-212ENST00000420013 NCOA2Q15596 1464 aa32.57■■■□□ 2.8
MCF2L-212ENST00000420013 MBD5Q9P267 1494 aa32.56■■■□□ 2.8
MCF2L-212ENST00000420013 CEBPAP49715 358 aaPredicted RBP32.55■■■□□ 2.8
MCF2L-212ENST00000420013 RTEL1-TNFRSF6BF6WH68 1400 aa32.52■■■□□ 2.8
MCF2L-212ENST00000420013 CAMSAP2Q08AD1 1489 aa32.51■■■□□ 2.79
MCF2L-212ENST00000420013 CCDC141Q6ZP82 1450 aa32.5■■■□□ 2.79
MCF2L-212ENST00000420013 MAP3K1Q13233 1512 aa32.5■■■□□ 2.79
MCF2L-212ENST00000420013 STRCQ7RTU9 1775 aa32.49■■■□□ 2.79
MCF2L-212ENST00000420013 NPATQ14207 1427 aa32.49■■■□□ 2.79
MCF2L-212ENST00000420013 CLTCQ00610 1675 aaKnown RBP32.49■■■□□ 2.79
MCF2L-212ENST00000420013 FBXO41Q8TF61 875 aa32.48■■■□□ 2.79
MCF2L-212ENST00000420013 ARHGEF5Q12774 1597 aa32.46■■■□□ 2.79
MCF2L-212ENST00000420013 LRRC9Q6ZRR7 1453 aa32.46■■■□□ 2.79
MCF2L-212ENST00000420013 ZNF644Q9H582 1327 aaPredicted RBP32.45■■■□□ 2.78
MCF2L-212ENST00000420013 FAM135AQ9P2D6 1515 aa32.41■■■□□ 2.78
MCF2L-212ENST00000420013 ZNF142P52746 1687 aaPredicted RBP32.4■■■□□ 2.78
MCF2L-212ENST00000420013 MYO3AQ8NEV4 1616 aa32.37■■■□□ 2.77
MCF2L-212ENST00000420013 RSPH4AQ5TD94 716 aa32.37■■■□□ 2.77
MCF2L-212ENST00000420013 ZMYM3Q14202 1370 aa32.36■■■□□ 2.77
MCF2L-212ENST00000420013 PPP6R1Q9UPN7 881 aa32.36■■■□□ 2.77
MCF2L-212ENST00000420013 LOC105371045A0A1W2PR82 267 aa32.35■■■□□ 2.77
MCF2L-212ENST00000420013 DMRT2Q9Y5R5 561 aa32.35■■■□□ 2.77
MCF2L-212ENST00000420013 DHX29Q7Z478 1369 aaKnown RBP32.33■■■□□ 2.77
MCF2L-212ENST00000420013 MAST1Q9Y2H9 1570 aa32.32■■■□□ 2.76
MCF2L-212ENST00000420013 PTPRTO14522 1441 aa32.31■■■□□ 2.76
MCF2L-212ENST00000420013 NCOA1Q15788 1441 aa32.3■■■□□ 2.76
MCF2L-212ENST00000420013 PTPRKQ15262 1439 aa32.28■■■□□ 2.76
MCF2L-212ENST00000420013 KDM5DQ9BY66 1539 aa32.28■■■□□ 2.76
MCF2L-212ENST00000420013 MIA2Q96PC5 1412 aa32.27■■■□□ 2.76
MCF2L-212ENST00000420013 GGT6Q6P531 493 aa32.27■■■□□ 2.76
MCF2L-212ENST00000420013 CEP170BQ9Y4F5 1589 aaPredicted RBP32.27■■■□□ 2.76
MCF2L-212ENST00000420013 CAMSAP1Q5T5Y3 1602 aa32.26■■■□□ 2.75
MCF2L-212ENST00000420013 MYOM3Q5VTT5 1437 aa32.26■■■□□ 2.75
MCF2L-212ENST00000420013 PLA2R1Q13018 1463 aa32.22■■■□□ 2.75
MCF2L-212ENST00000420013 EIF2AK4Q9P2K8 1649 aaKnown RBP32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms