RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 PCF11O94913 1555 aaKnown RBP28.4■■■□□ 2.14
PTCD1-202ENST00000419981 TROQ12816 1431 aaPredicted RBP28.37■■■□□ 2.13
PTCD1-202ENST00000419981 MAGI2Q86UL8 1455 aa28.37■■■□□ 2.13
PTCD1-202ENST00000419981 POGZQ7Z3K3 1410 aa28.36■■■□□ 2.13
PTCD1-202ENST00000419981 CDC42BPBQ9Y5S2 1711 aa28.36■■■□□ 2.13
PTCD1-202ENST00000419981 CLIP1P30622 1438 aa28.35■■■□□ 2.13
PTCD1-202ENST00000419981 SCAPERQ9BY12 1400 aa28.35■■■□□ 2.13
PTCD1-202ENST00000419981 FER1L4A9Z1Z3 1794 aa28.34■■■□□ 2.13
PTCD1-202ENST00000419981 YEATS2Q9ULM3 1422 aa28.34■■■□□ 2.13
PTCD1-202ENST00000419981 ARHGAP5Q13017 1502 aa28.32■■■□□ 2.12
PTCD1-202ENST00000419981 CCDC18Q5T9S5 1454 aa28.31■■■□□ 2.12
PTCD1-202ENST00000419981 PREX2Q70Z35 1606 aa28.3■■■□□ 2.12
PTCD1-202ENST00000419981 CASKIN1Q8WXD9 1431 aa28.28■■■□□ 2.12
PTCD1-202ENST00000419981 EFCAB2Q5VUJ9 269 aa28.28■■■□□ 2.12
PTCD1-202ENST00000419981 CDC42BPAQ5VT25 1732 aa28.26■■■□□ 2.12
PTCD1-202ENST00000419981 ZNF518AQ6AHZ1 1483 aa28.24■■■□□ 2.11
PTCD1-202ENST00000419981 KDM5CP41229 1560 aa28.24■■■□□ 2.11
PTCD1-202ENST00000419981 FYCO1Q9BQS8 1478 aa28.23■■■□□ 2.11
PTCD1-202ENST00000419981 ITSN2Q9NZM3 1697 aa28.22■■■□□ 2.11
PTCD1-202ENST00000419981 ILDR1Q86SU0 546 aaPredicted RBP28.21■■■□□ 2.11
PTCD1-202ENST00000419981 ATP10AO60312 1499 aa28.21■■■□□ 2.11
PTCD1-202ENST00000419981 C9orf84Q5VXU9 1444 aa28.2■■■□□ 2.11
PTCD1-202ENST00000419981 LMTK3Q96Q04 1460 aa28.18■■■□□ 2.1
PTCD1-202ENST00000419981 ABCC1P33527 1531 aa28.16■■■□□ 2.1
PTCD1-202ENST00000419981 ARHGEF12Q9NZN5 1544 aa28.14■■■□□ 2.1
PTCD1-202ENST00000419981 DIP2CQ9Y2E4 1556 aa28.14■■■□□ 2.1
PTCD1-202ENST00000419981 ABCA6Q8N139 1617 aa28.13■■■□□ 2.09
PTCD1-202ENST00000419981 MLECQ14165 292 aa28.12■■■□□ 2.09
PTCD1-202ENST00000419981 REREQ9P2R6 1566 aa28.1■■■□□ 2.09
PTCD1-202ENST00000419981 PLPPR3Q6T4P5 718 aa28.08■■■□□ 2.09
PTCD1-202ENST00000419981 AFAP1Q8N556 730 aa28.08■■■□□ 2.09
PTCD1-202ENST00000419981 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
PTCD1-202ENST00000419981 KIDINS220Q9ULH0 1771 aa28.06■■■□□ 2.08
PTCD1-202ENST00000419981 MYT1LQ9UL68 1186 aa28.06■■■□□ 2.08
PTCD1-202ENST00000419981 MLH3Q9UHC1 1453 aa28.06■■■□□ 2.08
PTCD1-202ENST00000419981 SAMD9LQ8IVG5 1584 aa28.03■■■□□ 2.08
PTCD1-202ENST00000419981 TRAPPC8Q9Y2L5 1435 aa28.02■■■□□ 2.08
PTCD1-202ENST00000419981 SETD1BQ9UPS6 1966 aaKnown RBP28■■■□□ 2.07
PTCD1-202ENST00000419981 SYCP2Q9BX26 1530 aa27.97■■■□□ 2.07
PTCD1-202ENST00000419981 C3P01024 1663 aa27.97■■■□□ 2.07
PTCD1-202ENST00000419981 AGLP35573 1532 aa27.96■■■□□ 2.07
PTCD1-202ENST00000419981 GPATCH8Q9UKJ3 1502 aaKnown RBP27.96■■■□□ 2.07
PTCD1-202ENST00000419981 HSPA2P54652 639 aa27.94■■■□□ 2.06
PTCD1-202ENST00000419981 SUPT6HQ7KZ85 1726 aaKnown RBP27.92■■■□□ 2.06
PTCD1-202ENST00000419981 ZNF777Q9ULD5 760 aaPredicted RBP27.91■■■□□ 2.06
PTCD1-202ENST00000419981 MTUS2Q5JR59 1369 aa27.89■■■□□ 2.06
PTCD1-202ENST00000419981 EHBP1L1Q8N3D4 1523 aa27.89■■■□□ 2.06
PTCD1-202ENST00000419981 PLEKHH2Q8IVE3 1493 aa27.88■■■□□ 2.05
PTCD1-202ENST00000419981 CCNB3Q8WWL7 1395 aa27.87■■■□□ 2.05
PTCD1-202ENST00000419981 TIAM1Q13009 1591 aa27.87■■■□□ 2.05
PTCD1-202ENST00000419981 INO80Q9ULG1 1556 aaPredicted RBP27.87■■■□□ 2.05
PTCD1-202ENST00000419981 CEBPAP49715 358 aaPredicted RBP27.87■■■□□ 2.05
PTCD1-202ENST00000419981 CEP162Q5TB80 1403 aa27.86■■■□□ 2.05
PTCD1-202ENST00000419981 ATP7AQ04656 1500 aa27.86■■■□□ 2.05
PTCD1-202ENST00000419981 MROH2AA6NES4 1674 aa27.85■■■□□ 2.05
PTCD1-202ENST00000419981 FBXO41Q8TF61 875 aa27.84■■■□□ 2.05
PTCD1-202ENST00000419981 STRCQ7RTU9 1775 aa27.83■■■□□ 2.05
PTCD1-202ENST00000419981 KIAA1107Q9UPP5 1409 aa27.83■■■□□ 2.05
PTCD1-202ENST00000419981 ADGBQ8N7X0 1667 aa27.82■■■□□ 2.04
PTCD1-202ENST00000419981 CFDP1Q9UEE9 299 aaPredicted RBP27.82■■■□□ 2.04
PTCD1-202ENST00000419981 UHRF1BP1Q6BDS2 1440 aa27.81■■■□□ 2.04
PTCD1-202ENST00000419981 HNRNPMP52272 730 aaKnown RBP eCLIP27.8■■■□□ 2.04
PTCD1-202ENST00000419981 ESF1Q9H501 851 aaKnown RBP27.8■■■□□ 2.04
PTCD1-202ENST00000419981 SPAG9O60271 1321 aaKnown RBP27.8■■■□□ 2.04
PTCD1-202ENST00000419981 PLXNC1O60486 1568 aa27.78■■■□□ 2.04
PTCD1-202ENST00000419981 CNTLNQ9NXG0 1405 aa27.77■■■□□ 2.04
PTCD1-202ENST00000419981 CLTCQ00610 1675 aaKnown RBP27.77■■■□□ 2.04
PTCD1-202ENST00000419981 A2MP01023 1474 aa27.71■■■□□ 2.03
PTCD1-202ENST00000419981 MBD5Q9P267 1494 aa27.66■■■□□ 2.02
PTCD1-202ENST00000419981 ZNF644Q9H582 1327 aaPredicted RBP27.65■■■□□ 2.02
PTCD1-202ENST00000419981 NCOA2Q15596 1464 aa27.64■■■□□ 2.02
PTCD1-202ENST00000419981 NPATQ14207 1427 aa27.62■■■□□ 2.01
PTCD1-202ENST00000419981 ZNF142P52746 1687 aaPredicted RBP27.62■■■□□ 2.01
PTCD1-202ENST00000419981 MYO3AQ8NEV4 1616 aa27.61■■■□□ 2.01
PTCD1-202ENST00000419981 DMRT2Q9Y5R5 561 aa27.61■■■□□ 2.01
PTCD1-202ENST00000419981 CAMSAP2Q08AD1 1489 aa27.61■■■□□ 2.01
PTCD1-202ENST00000419981 RTEL1-TNFRSF6BF6WH68 1400 aa27.6■■■□□ 2.01
PTCD1-202ENST00000419981 ZMYM3Q14202 1370 aa27.6■■■□□ 2.01
PTCD1-202ENST00000419981 CERKQ8TCT0 537 aa27.59■■■□□ 2.01
PTCD1-202ENST00000419981 VPS8Q8N3P4 1428 aa27.58■■■□□ 2.01
PTCD1-202ENST00000419981 CCDC141Q6ZP82 1450 aa27.57■■■□□ 2
PTCD1-202ENST00000419981 CAMSAP1Q5T5Y3 1602 aa27.55■■■□□ 2
PTCD1-202ENST00000419981 PTPRTO14522 1441 aa27.54■■■□□ 2
PTCD1-202ENST00000419981 ARHGEF5Q12774 1597 aa27.54■■■□□ 2
PTCD1-202ENST00000419981 GGT6Q6P531 493 aa27.54■■■□□ 2
PTCD1-202ENST00000419981 LRRC9Q6ZRR7 1453 aa27.52■■■□□ 2
PTCD1-202ENST00000419981 NCOA1Q15788 1441 aa27.52■■■□□ 2
PTCD1-202ENST00000419981 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
PTCD1-202ENST00000419981 CEP170BQ9Y4F5 1589 aaPredicted RBP27.51■■□□□ 1.99
PTCD1-202ENST00000419981 PTPRKQ15262 1439 aa27.5■■□□□ 1.99
PTCD1-202ENST00000419981 DHX29Q7Z478 1369 aaKnown RBP27.49■■□□□ 1.99
PTCD1-202ENST00000419981 PPP6R1Q9UPN7 881 aa27.49■■□□□ 1.99
PTCD1-202ENST00000419981 MAP3K1Q13233 1512 aa27.47■■□□□ 1.99
PTCD1-202ENST00000419981 RSPH4AQ5TD94 716 aa27.46■■□□□ 1.99
PTCD1-202ENST00000419981 FAM135AQ9P2D6 1515 aa27.46■■□□□ 1.99
PTCD1-202ENST00000419981 KDM5DQ9BY66 1539 aa27.44■■□□□ 1.98
PTCD1-202ENST00000419981 MAST1Q9Y2H9 1570 aa27.43■■□□□ 1.98
PTCD1-202ENST00000419981 POLR1AO95602 1720 aaPredicted RBP27.41■■□□□ 1.98
PTCD1-202ENST00000419981 LTBP4Q8N2S1 1624 aa27.41■■□□□ 1.98
PTCD1-202ENST00000419981 PLA2R1Q13018 1463 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms