RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 ARHGAP5Q13017 1502 aa19.76■□□□□ 0.75
ATG4B-208ENST00000419606 CFDP1Q9UEE9 299 aaPredicted RBP19.75■□□□□ 0.75
ATG4B-208ENST00000419606 FGD6Q6ZV73 1430 aa19.75■□□□□ 0.75
ATG4B-208ENST00000419606 ZNF644Q9H582 1327 aaPredicted RBP19.75■□□□□ 0.75
ATG4B-208ENST00000419606 ZNF777Q9ULD5 760 aaPredicted RBP19.74■□□□□ 0.75
ATG4B-208ENST00000419606 SAMD9LQ8IVG5 1584 aa19.73■□□□□ 0.75
ATG4B-208ENST00000419606 FANCAO15360 1455 aa19.73■□□□□ 0.75
ATG4B-208ENST00000419606 ARAP3Q8WWN8 1544 aa19.72■□□□□ 0.75
ATG4B-208ENST00000419606 PTPN23Q9H3S7 1636 aa19.72■□□□□ 0.75
ATG4B-208ENST00000419606 MIA2Q96PC5 1412 aa19.7■□□□□ 0.74
ATG4B-208ENST00000419606 EFCAB2Q5VUJ9 269 aa19.7■□□□□ 0.74
ATG4B-208ENST00000419606 CAMSAP2Q08AD1 1489 aa19.69■□□□□ 0.74
ATG4B-208ENST00000419606 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
ATG4B-208ENST00000419606 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
ATG4B-208ENST00000419606 AKNAQ7Z591 1439 aa19.67■□□□□ 0.74
ATG4B-208ENST00000419606 CFAP74Q9C0B2 1584 aa19.66■□□□□ 0.74
ATG4B-208ENST00000419606 FAM50AQ14320 339 aaKnown RBP19.66■□□□□ 0.74
ATG4B-208ENST00000419606 ARHGEF12Q9NZN5 1544 aa19.66■□□□□ 0.74
ATG4B-208ENST00000419606 TEX14Q8IWB6 1497 aa19.65■□□□□ 0.74
ATG4B-208ENST00000419606 NEO1Q92859 1461 aa19.65■□□□□ 0.74
ATG4B-208ENST00000419606 ABCC1P33527 1531 aa19.65■□□□□ 0.74
ATG4B-208ENST00000419606 HNRNPMP52272 730 aaKnown RBP eCLIP19.64■□□□□ 0.734e-7■■■■□ 21.8
ATG4B-208ENST00000419606 SYCP2Q9BX26 1530 aa19.64■□□□□ 0.73
ATG4B-208ENST00000419606 ADGRL1O94910 1474 aa19.63■□□□□ 0.73
ATG4B-208ENST00000419606 SCAPERQ9BY12 1400 aa19.61■□□□□ 0.73
ATG4B-208ENST00000419606 MBD5Q9P267 1494 aa19.6■□□□□ 0.73
ATG4B-208ENST00000419606 COL17A1Q9UMD9 1497 aaPredicted RBP19.6■□□□□ 0.73
ATG4B-208ENST00000419606 TRAPPC8Q9Y2L5 1435 aa19.59■□□□□ 0.73
ATG4B-208ENST00000419606 PLEKHH2Q8IVE3 1493 aa19.58■□□□□ 0.72
ATG4B-208ENST00000419606 KIAA1107Q9UPP5 1409 aa19.58■□□□□ 0.72
ATG4B-208ENST00000419606 ITGAEP38570 1179 aa19.57■□□□□ 0.72
ATG4B-208ENST00000419606 DNMT1P26358 1616 aaKnown RBP19.56■□□□□ 0.72
ATG4B-208ENST00000419606 RAPGEF3O95398 923 aa19.56■□□□□ 0.72
ATG4B-208ENST00000419606 AFAP1Q8N556 730 aa19.56■□□□□ 0.72
ATG4B-208ENST00000419606 ARHGEF5Q12774 1597 aa19.56■□□□□ 0.72
ATG4B-208ENST00000419606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.56■□□□□ 0.724e-7■□□□□ 8.1
ATG4B-208ENST00000419606 ABCC5O15440 1437 aa19.55■□□□□ 0.72
ATG4B-208ENST00000419606 PTPRKQ15262 1439 aa19.55■□□□□ 0.72
ATG4B-208ENST00000419606 RICTORQ6R327 1708 aa19.55■□□□□ 0.72
ATG4B-208ENST00000419606 FRMPD1Q5SYB0 1578 aa19.54■□□□□ 0.72
ATG4B-208ENST00000419606 DAPK1P53355 1430 aa19.54■□□□□ 0.72
ATG4B-208ENST00000419606 DENND4BO75064 1496 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-208ENST00000419606 CROCC2H7BZ55 1655 aa19.53■□□□□ 0.72
ATG4B-208ENST00000419606 POGZQ7Z3K3 1410 aa19.53■□□□□ 0.72
ATG4B-208ENST00000419606 CCDC141Q6ZP82 1450 aa19.53■□□□□ 0.72
ATG4B-208ENST00000419606 TRIM26Q12899 539 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-208ENST00000419606 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
ATG4B-208ENST00000419606 KDM6BO15054 1643 aa19.5■□□□□ 0.71
ATG4B-208ENST00000419606 ZNF518AQ6AHZ1 1483 aa19.48■□□□□ 0.71
ATG4B-208ENST00000419606 KDM5CP41229 1560 aa19.48■□□□□ 0.71
ATG4B-208ENST00000419606 C9orf84Q5VXU9 1444 aa19.46■□□□□ 0.71
ATG4B-208ENST00000419606 RSPH4AQ5TD94 716 aa19.46■□□□□ 0.71
ATG4B-208ENST00000419606 SPAG9O60271 1321 aaKnown RBP19.45■□□□□ 0.7
ATG4B-208ENST00000419606 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-208ENST00000419606 MAST1Q9Y2H9 1570 aa19.44■□□□□ 0.7
ATG4B-208ENST00000419606 KIDINS220Q9ULH0 1771 aa19.44■□□□□ 0.7
ATG4B-208ENST00000419606 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
ATG4B-208ENST00000419606 TSPY4P0CV99 314 aa19.44■□□□□ 0.7
ATG4B-208ENST00000419606 TSPY10P0CW01 314 aa19.44■□□□□ 0.7
ATG4B-208ENST00000419606 ZFYVE16Q7Z3T8 1539 aa19.43■□□□□ 0.7
ATG4B-208ENST00000419606 HECW2Q9P2P5 1572 aa19.43■□□□□ 0.7
ATG4B-208ENST00000419606 ADGBQ8N7X0 1667 aa19.43■□□□□ 0.7
ATG4B-208ENST00000419606 ATP7AQ04656 1500 aa19.42■□□□□ 0.7
ATG4B-208ENST00000419606 ZMYM4Q5VZL5 1548 aa19.42■□□□□ 0.7
ATG4B-208ENST00000419606 MYT1LQ9UL68 1186 aa19.42■□□□□ 0.7
ATG4B-208ENST00000419606 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
ATG4B-208ENST00000419606 YEATS2Q9ULM3 1422 aa19.41■□□□□ 0.7
ATG4B-208ENST00000419606 MLH3Q9UHC1 1453 aa19.41■□□□□ 0.7
ATG4B-208ENST00000419606 RRP7BPQ9NSQ0 103 aa19.4■□□□□ 0.7
ATG4B-208ENST00000419606 RTEL1-TNFRSF6BF6WH68 1400 aa19.39■□□□□ 0.69
ATG4B-208ENST00000419606 ADGRL2O95490 1459 aa19.39■□□□□ 0.69
ATG4B-208ENST00000419606 ABCA6Q8N139 1617 aa19.39■□□□□ 0.69
ATG4B-208ENST00000419606 NCOA1Q15788 1441 aa19.38■□□□□ 0.69
ATG4B-208ENST00000419606 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
ATG4B-208ENST00000419606 DIP2CQ9Y2E4 1556 aa19.36■□□□□ 0.69
ATG4B-208ENST00000419606 ROCK1Q13464 1354 aa19.35■□□□□ 0.69
ATG4B-208ENST00000419606 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
ATG4B-208ENST00000419606 MAGI2Q86UL8 1455 aa19.34■□□□□ 0.69
ATG4B-208ENST00000419606 KIF15Q9NS87 1388 aa19.33■□□□□ 0.69
ATG4B-208ENST00000419606 ARHGEF40Q8TER5 1519 aa19.32■□□□□ 0.68
ATG4B-208ENST00000419606 NAIPQ13075 1403 aa19.32■□□□□ 0.68
ATG4B-208ENST00000419606 GCC2Q8IWJ2 1684 aa19.31■□□□□ 0.68
ATG4B-208ENST00000419606 SIGLEC1Q9BZZ2 1709 aa19.31■□□□□ 0.68
ATG4B-208ENST00000419606 HFM1A2PYH4 1435 aa19.3■□□□□ 0.68
ATG4B-208ENST00000419606 ATP10AO60312 1499 aa19.28■□□□□ 0.68
ATG4B-208ENST00000419606 A2MP01023 1474 aa19.28■□□□□ 0.68
ATG4B-208ENST00000419606 DUOX2Q9NRD8 1548 aa19.28■□□□□ 0.68
ATG4B-208ENST00000419606 DHX29Q7Z478 1369 aaKnown RBP19.26■□□□□ 0.67
ATG4B-208ENST00000419606 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
ATG4B-208ENST00000419606 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
ATG4B-208ENST00000419606 RAB3GAP2Q9H2M9 1393 aa19.22■□□□□ 0.67
ATG4B-208ENST00000419606 REREQ9P2R6 1566 aa19.22■□□□□ 0.67
ATG4B-208ENST00000419606 ERBINQ96RT1 1412 aa19.21■□□□□ 0.67
ATG4B-208ENST00000419606 KIF3BO15066 747 aa19.19■□□□□ 0.66
ATG4B-208ENST00000419606 EIF2AK4Q9P2K8 1649 aaKnown RBP19.18■□□□□ 0.66
ATG4B-208ENST00000419606 BCORL1Q5H9F3 1711 aa19.17■□□□□ 0.66
ATG4B-208ENST00000419606 AGLP35573 1532 aa19.16■□□□□ 0.66
ATG4B-208ENST00000419606 MROH1Q8NDA8 1641 aa19.15■□□□□ 0.66
ATG4B-208ENST00000419606 MLECQ14165 292 aa19.14■□□□□ 0.65
ATG4B-208ENST00000419606 ARID4BQ4LE39 1312 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms