RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 ZNF777Q9ULD5 760 aaPredicted RBP19.37■□□□□ 0.69
LINC00642-201ENST00000419459 ZNF644Q9H582 1327 aaPredicted RBP19.36■□□□□ 0.69
LINC00642-201ENST00000419459 CFDP1Q9UEE9 299 aaPredicted RBP19.35■□□□□ 0.69
LINC00642-201ENST00000419459 PTPN23Q9H3S7 1636 aa19.35■□□□□ 0.69
LINC00642-201ENST00000419459 FAM69CQ0P6D2 419 aa19.34■□□□□ 0.69
LINC00642-201ENST00000419459 KIF13AQ9H1H9 1805 aa19.34■□□□□ 0.69
LINC00642-201ENST00000419459 ARHGAP5Q13017 1502 aa19.34■□□□□ 0.69
LINC00642-201ENST00000419459 ITGAEP38570 1179 aa19.33■□□□□ 0.68
LINC00642-201ENST00000419459 TSPOAP1O95153 1857 aa19.33■□□□□ 0.68
LINC00642-201ENST00000419459 MYT1Q01538 1121 aa19.32■□□□□ 0.68
LINC00642-201ENST00000419459 PLCH2O75038 1416 aa19.3■□□□□ 0.68
LINC00642-201ENST00000419459 CD109Q6YHK3 1445 aa19.3■□□□□ 0.68
LINC00642-201ENST00000419459 MIA2Q96PC5 1412 aa19.3■□□□□ 0.68
LINC00642-201ENST00000419459 MAP3K4Q9Y6R4 1608 aa19.3■□□□□ 0.68
LINC00642-201ENST00000419459 CAMSAP2Q08AD1 1489 aa19.29■□□□□ 0.68
LINC00642-201ENST00000419459 SAMD9LQ8IVG5 1584 aa19.29■□□□□ 0.68
LINC00642-201ENST00000419459 GLI2P10070 1586 aa19.27■□□□□ 0.67
LINC00642-201ENST00000419459 FANCAO15360 1455 aa19.26■□□□□ 0.67
LINC00642-201ENST00000419459 TCOF1Q13428 1488 aaKnown RBP19.25■□□□□ 0.67
LINC00642-201ENST00000419459 TRHP20396 242 aaPredicted RBP19.24■□□□□ 0.67
LINC00642-201ENST00000419459 SYCP2Q9BX26 1530 aa19.23■□□□□ 0.67
LINC00642-201ENST00000419459 PPRC1Q5VV67 1664 aaKnown RBP19.22■□□□□ 0.67
LINC00642-201ENST00000419459 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.67
LINC00642-201ENST00000419459 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.67
LINC00642-201ENST00000419459 ARAP3Q8WWN8 1544 aa19.21■□□□□ 0.67
LINC00642-201ENST00000419459 PTPRKQ15262 1439 aa19.19■□□□□ 0.66
LINC00642-201ENST00000419459 ARHGEF12Q9NZN5 1544 aa19.19■□□□□ 0.66
LINC00642-201ENST00000419459 ABCC1P33527 1531 aa19.18■□□□□ 0.66
LINC00642-201ENST00000419459 DNMT1P26358 1616 aaKnown RBP19.18■□□□□ 0.66
LINC00642-201ENST00000419459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.17■□□□□ 0.66
LINC00642-201ENST00000419459 CHIC2Q9UKJ5 165 aa19.17■□□□□ 0.66
LINC00642-201ENST00000419459 ADGRL1O94910 1474 aa19.16■□□□□ 0.66
LINC00642-201ENST00000419459 MBD5Q9P267 1494 aa19.16■□□□□ 0.66
LINC00642-201ENST00000419459 DAPK1P53355 1430 aa19.16■□□□□ 0.66
LINC00642-201ENST00000419459 AKNAQ7Z591 1439 aa19.15■□□□□ 0.66
LINC00642-201ENST00000419459 ABCC5O15440 1437 aa19.15■□□□□ 0.66
LINC00642-201ENST00000419459 ACIN1Q9UKV3 1341 aaKnown RBP19.14■□□□□ 0.65
LINC00642-201ENST00000419459 CROCC2H7BZ55 1655 aa19.14■□□□□ 0.65
LINC00642-201ENST00000419459 CFAP74Q9C0B2 1584 aa19.13■□□□□ 0.65
LINC00642-201ENST00000419459 TRAPPC8Q9Y2L5 1435 aa19.13■□□□□ 0.65
LINC00642-201ENST00000419459 SCAPERQ9BY12 1400 aa19.13■□□□□ 0.65
LINC00642-201ENST00000419459 AFAP1Q8N556 730 aa19.12■□□□□ 0.65
LINC00642-201ENST00000419459 ARHGEF5Q12774 1597 aa19.1■□□□□ 0.65
LINC00642-201ENST00000419459 CCDC141Q6ZP82 1450 aa19.1■□□□□ 0.65
LINC00642-201ENST00000419459 PLEKHH2Q8IVE3 1493 aa19.1■□□□□ 0.65
LINC00642-201ENST00000419459 KIAA1107Q9UPP5 1409 aa19.1■□□□□ 0.65
LINC00642-201ENST00000419459 NEO1Q92859 1461 aa19.1■□□□□ 0.65
LINC00642-201ENST00000419459 RAPGEF3O95398 923 aa19.08■□□□□ 0.65
LINC00642-201ENST00000419459 TEX14Q8IWB6 1497 aa19.08■□□□□ 0.65
LINC00642-201ENST00000419459 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
LINC00642-201ENST00000419459 C9orf84Q5VXU9 1444 aa19.06■□□□□ 0.64
LINC00642-201ENST00000419459 TSPY4P0CV99 314 aa19.05■□□□□ 0.64
LINC00642-201ENST00000419459 TSPY10P0CW01 314 aa19.05■□□□□ 0.64
LINC00642-201ENST00000419459 POGZQ7Z3K3 1410 aa19.04■□□□□ 0.64
LINC00642-201ENST00000419459 RICTORQ6R327 1708 aa19.04■□□□□ 0.64
LINC00642-201ENST00000419459 ADGBQ8N7X0 1667 aa19.04■□□□□ 0.64
LINC00642-201ENST00000419459 CENPBP07199 599 aaPredicted RBP19.03■□□□□ 0.64
LINC00642-201ENST00000419459 ZNF518AQ6AHZ1 1483 aa19.03■□□□□ 0.64
LINC00642-201ENST00000419459 COL17A1Q9UMD9 1497 aaPredicted RBP19.03■□□□□ 0.64
LINC00642-201ENST00000419459 DENND4BO75064 1496 aaPredicted RBP19.02■□□□□ 0.63
LINC00642-201ENST00000419459 SHANK2Q9UPX8 1470 aa19.02■□□□□ 0.63
LINC00642-201ENST00000419459 FRMPD1Q5SYB0 1578 aa19.01■□□□□ 0.63
LINC00642-201ENST00000419459 MYT1LQ9UL68 1186 aa19.01■□□□□ 0.63
LINC00642-201ENST00000419459 ZFYVE16Q7Z3T8 1539 aa19■□□□□ 0.63
LINC00642-201ENST00000419459 RSPH4AQ5TD94 716 aa19■□□□□ 0.63
LINC00642-201ENST00000419459 NCOA1Q15788 1441 aa19■□□□□ 0.63
LINC00642-201ENST00000419459 SPAG9O60271 1321 aaKnown RBP18.99■□□□□ 0.63
LINC00642-201ENST00000419459 NAIPQ13075 1403 aa18.99■□□□□ 0.63
LINC00642-201ENST00000419459 KDM5CP41229 1560 aa18.99■□□□□ 0.63
LINC00642-201ENST00000419459 KDM6BO15054 1643 aa18.99■□□□□ 0.63
LINC00642-201ENST00000419459 HFM1A2PYH4 1435 aa18.98■□□□□ 0.63
LINC00642-201ENST00000419459 KIDINS220Q9ULH0 1771 aa18.98■□□□□ 0.63
LINC00642-201ENST00000419459 ATP7AQ04656 1500 aa18.98■□□□□ 0.63
LINC00642-201ENST00000419459 INO80Q9ULG1 1556 aaPredicted RBP18.98■□□□□ 0.63
LINC00642-201ENST00000419459 GCC2Q8IWJ2 1684 aa18.97■□□□□ 0.63
LINC00642-201ENST00000419459 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
LINC00642-201ENST00000419459 MAST1Q9Y2H9 1570 aa18.97■□□□□ 0.63
LINC00642-201ENST00000419459 ANKRD30AQ9BXX3 1397 aa18.96■□□□□ 0.63
LINC00642-201ENST00000419459 RAB3GAP2Q9H2M9 1393 aa18.96■□□□□ 0.63
LINC00642-201ENST00000419459 NEUROD1Q13562 356 aa18.96■□□□□ 0.63
LINC00642-201ENST00000419459 ROCK1Q13464 1354 aa18.96■□□□□ 0.63
LINC00642-201ENST00000419459 KIF15Q9NS87 1388 aa18.96■□□□□ 0.63
LINC00642-201ENST00000419459 HECW2Q9P2P5 1572 aa18.96■□□□□ 0.63
LINC00642-201ENST00000419459 SETD5Q9C0A6 1442 aa18.95■□□□□ 0.62
LINC00642-201ENST00000419459 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
LINC00642-201ENST00000419459 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
LINC00642-201ENST00000419459 CCER1Q8TC90 406 aaPredicted RBP18.91■□□□□ 0.62
LINC00642-201ENST00000419459 YEATS2Q9ULM3 1422 aa18.91■□□□□ 0.62
LINC00642-201ENST00000419459 RTEL1-TNFRSF6BF6WH68 1400 aa18.9■□□□□ 0.62
LINC00642-201ENST00000419459 MLH3Q9UHC1 1453 aa18.9■□□□□ 0.62
LINC00642-201ENST00000419459 ANKRD50Q9ULJ7 1429 aa18.89■□□□□ 0.61
LINC00642-201ENST00000419459 DIEXFQ68CQ4 756 aaKnown RBP18.88■□□□□ 0.61
LINC00642-201ENST00000419459 ZMYM4Q5VZL5 1548 aa18.88■□□□□ 0.61
LINC00642-201ENST00000419459 DIP2CQ9Y2E4 1556 aa18.86■□□□□ 0.61
LINC00642-201ENST00000419459 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
LINC00642-201ENST00000419459 DUOX2Q9NRD8 1548 aa18.85■□□□□ 0.61
LINC00642-201ENST00000419459 SIGLEC1Q9BZZ2 1709 aa18.81■□□□□ 0.6
LINC00642-201ENST00000419459 A2MP01023 1474 aa18.81■□□□□ 0.6
LINC00642-201ENST00000419459 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
LINC00642-201ENST00000419459 ERBINQ96RT1 1412 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms