RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ARHGAP5Q13017 1502 aa32.51■■■□□ 2.79
GTF3A-202ENST00000419181 ZMYM4Q5VZL5 1548 aa32.47■■■□□ 2.79
GTF3A-202ENST00000419181 SCAPERQ9BY12 1400 aa32.47■■■□□ 2.79
GTF3A-202ENST00000419181 CDC42BPAQ5VT25 1732 aa32.46■■■□□ 2.79
GTF3A-202ENST00000419181 POGZQ7Z3K3 1410 aa32.45■■■□□ 2.79
GTF3A-202ENST00000419181 VPS8Q8N3P4 1428 aa32.44■■■□□ 2.78
GTF3A-202ENST00000419181 ARHGEF40Q8TER5 1519 aa32.43■■■□□ 2.78
GTF3A-202ENST00000419181 MTUS2Q5JR59 1369 aa32.42■■■□□ 2.78
GTF3A-202ENST00000419181 EHBP1L1Q8N3D4 1523 aa32.4■■■□□ 2.78
GTF3A-202ENST00000419181 MAGI2Q86UL8 1455 aa32.36■■■□□ 2.77
GTF3A-202ENST00000419181 GPATCH8Q9UKJ3 1502 aaKnown RBP32.36■■■□□ 2.77
GTF3A-202ENST00000419181 ZFYVE16Q7Z3T8 1539 aa32.35■■■□□ 2.77
GTF3A-202ENST00000419181 TIAM1Q13009 1591 aa32.34■■■□□ 2.77
GTF3A-202ENST00000419181 ABCC1P33527 1531 aa32.34■■■□□ 2.77
GTF3A-202ENST00000419181 ZNF518AQ6AHZ1 1483 aa32.33■■■□□ 2.77
GTF3A-202ENST00000419181 YEATS2Q9ULM3 1422 aa32.31■■■□□ 2.76
GTF3A-202ENST00000419181 KDM5CP41229 1560 aa32.31■■■□□ 2.76
GTF3A-202ENST00000419181 ITSN2Q9NZM3 1697 aa32.29■■■□□ 2.76
GTF3A-202ENST00000419181 ARHGEF12Q9NZN5 1544 aa32.28■■■□□ 2.76
GTF3A-202ENST00000419181 CCNB3Q8WWL7 1395 aa32.28■■■□□ 2.76
GTF3A-202ENST00000419181 SAMD9LQ8IVG5 1584 aa32.27■■■□□ 2.76
GTF3A-202ENST00000419181 AFAP1Q8N556 730 aa32.24■■■□□ 2.75
GTF3A-202ENST00000419181 SUPT6HQ7KZ85 1726 aaKnown RBP32.23■■■□□ 2.75
GTF3A-202ENST00000419181 MAP3K1Q13233 1512 aa32.22■■■□□ 2.75
GTF3A-202ENST00000419181 TRAPPC8Q9Y2L5 1435 aa32.22■■■□□ 2.75
GTF3A-202ENST00000419181 HECW2Q9P2P5 1572 aa32.22■■■□□ 2.75
GTF3A-202ENST00000419181 BCORL1Q5H9F3 1711 aa32.22■■■□□ 2.75
GTF3A-202ENST00000419181 ADAMTSL3P82987 1691 aa32.21■■■□□ 2.75
GTF3A-202ENST00000419181 SIGLEC1Q9BZZ2 1709 aa32.21■■■□□ 2.75
GTF3A-202ENST00000419181 CFDP1Q9UEE9 299 aaPredicted RBP32.2■■■□□ 2.75
GTF3A-202ENST00000419181 LRRC9Q6ZRR7 1453 aa32.19■■■□□ 2.74
GTF3A-202ENST00000419181 ZNF777Q9ULD5 760 aaPredicted RBP32.19■■■□□ 2.74
GTF3A-202ENST00000419181 NCOA2Q15596 1464 aa32.18■■■□□ 2.74
GTF3A-202ENST00000419181 SYCP2Q9BX26 1530 aa32.18■■■□□ 2.74
GTF3A-202ENST00000419181 ARID4BQ4LE39 1312 aaPredicted RBP32.18■■■□□ 2.74
GTF3A-202ENST00000419181 ATP10AO60312 1499 aa32.17■■■□□ 2.74
GTF3A-202ENST00000419181 MLH3Q9UHC1 1453 aa32.17■■■□□ 2.74
GTF3A-202ENST00000419181 PLEKHH2Q8IVE3 1493 aa32.16■■■□□ 2.74
GTF3A-202ENST00000419181 KIAA1107Q9UPP5 1409 aa32.15■■■□□ 2.74
GTF3A-202ENST00000419181 C9orf84Q5VXU9 1444 aa32.13■■■□□ 2.73
GTF3A-202ENST00000419181 DIP2CQ9Y2E4 1556 aa32.13■■■□□ 2.73
GTF3A-202ENST00000419181 ABCA6Q8N139 1617 aa32.11■■■□□ 2.73
GTF3A-202ENST00000419181 MADDQ8WXG6 1647 aa32.1■■■□□ 2.73
GTF3A-202ENST00000419181 KIDINS220Q9ULH0 1771 aa32.09■■■□□ 2.73
GTF3A-202ENST00000419181 HNRNPMP52272 730 aaKnown RBP eCLIP32.07■■■□□ 2.72
GTF3A-202ENST00000419181 KANK4Q5T7N3 995 aaPredicted RBP32.07■■■□□ 2.72
GTF3A-202ENST00000419181 REREQ9P2R6 1566 aa32.07■■■□□ 2.72
GTF3A-202ENST00000419181 MYT1LQ9UL68 1186 aa32.05■■■□□ 2.72
GTF3A-202ENST00000419181 ZNF644Q9H582 1327 aaPredicted RBP32.04■■■□□ 2.72
GTF3A-202ENST00000419181 PTPRMP28827 1452 aa32.03■■■□□ 2.72
GTF3A-202ENST00000419181 MBD5Q9P267 1494 aa32.01■■■□□ 2.71
GTF3A-202ENST00000419181 INO80Q9ULG1 1556 aaPredicted RBP32■■■□□ 2.71
GTF3A-202ENST00000419181 RIMS1Q86UR5 1692 aaKnown RBP31.99■■■□□ 2.71
GTF3A-202ENST00000419181 SPAG9O60271 1321 aaKnown RBP31.99■■■□□ 2.71
GTF3A-202ENST00000419181 CAMSAP2Q08AD1 1489 aa31.98■■■□□ 2.71
GTF3A-202ENST00000419181 ATP7AQ04656 1500 aa31.98■■■□□ 2.71
GTF3A-202ENST00000419181 APLP2Q06481 763 aa31.96■■■□□ 2.71
GTF3A-202ENST00000419181 FER1L4A9Z1Z3 1794 aa31.95■■■□□ 2.71
GTF3A-202ENST00000419181 AGLP35573 1532 aa31.95■■■□□ 2.7
GTF3A-202ENST00000419181 MLECQ14165 292 aa31.94■■■□□ 2.7
GTF3A-202ENST00000419181 MYOM3Q5VTT5 1437 aa31.9■■■□□ 2.7
GTF3A-202ENST00000419181 CCDC141Q6ZP82 1450 aa31.88■■■□□ 2.69
GTF3A-202ENST00000419181 ARHGEF5Q12774 1597 aa31.86■■■□□ 2.69
GTF3A-202ENST00000419181 MIA2Q96PC5 1412 aa31.86■■■□□ 2.69
GTF3A-202ENST00000419181 PLXNC1O60486 1568 aa31.85■■■□□ 2.69
GTF3A-202ENST00000419181 RTEL1-TNFRSF6BF6WH68 1400 aa31.84■■■□□ 2.69
GTF3A-202ENST00000419181 ADGBQ8N7X0 1667 aa31.83■■■□□ 2.69
GTF3A-202ENST00000419181 RSPH4AQ5TD94 716 aa31.82■■■□□ 2.68
GTF3A-202ENST00000419181 A2MP01023 1474 aa31.81■■■□□ 2.68
GTF3A-202ENST00000419181 PLPPR3Q6T4P5 718 aa31.76■■■□□ 2.67
GTF3A-202ENST00000419181 PTPN23Q9H3S7 1636 aa31.71■■■□□ 2.67
GTF3A-202ENST00000419181 MAST1Q9Y2H9 1570 aa31.7■■■□□ 2.67
GTF3A-202ENST00000419181 FGD6Q6ZV73 1430 aa31.69■■■□□ 2.66
GTF3A-202ENST00000419181 TSPY4P0CV99 314 aa31.68■■■□□ 2.66
GTF3A-202ENST00000419181 TSPY10P0CW01 314 aa31.68■■■□□ 2.66
GTF3A-202ENST00000419181 DHX29Q7Z478 1369 aaKnown RBP31.67■■■□□ 2.66
GTF3A-202ENST00000419181 LMTK3Q96Q04 1460 aa31.66■■■□□ 2.66
GTF3A-202ENST00000419181 CNTLNQ9NXG0 1405 aa31.66■■■□□ 2.66
GTF3A-202ENST00000419181 C3P01024 1663 aa31.65■■■□□ 2.66
GTF3A-202ENST00000419181 TCOF1Q13428 1488 aaKnown RBP31.65■■■□□ 2.66
GTF3A-202ENST00000419181 CEBPAP49715 358 aaPredicted RBP31.63■■■□□ 2.65
GTF3A-202ENST00000419181 ESF1Q9H501 851 aaKnown RBP31.63■■■□□ 2.65
GTF3A-202ENST00000419181 MROH2AA6NES4 1674 aa31.62■■■□□ 2.65
GTF3A-202ENST00000419181 CROCC2H7BZ55 1655 aa31.61■■■□□ 2.65
GTF3A-202ENST00000419181 DNMT1P26358 1616 aaKnown RBP31.58■■■□□ 2.65
GTF3A-202ENST00000419181 SHANK2Q9UPX8 1470 aa31.58■■■□□ 2.65
GTF3A-202ENST00000419181 CLTCQ00610 1675 aaKnown RBP31.57■■■□□ 2.64
GTF3A-202ENST00000419181 PREX1Q8TCU6 1659 aa31.57■■■□□ 2.64
GTF3A-202ENST00000419181 ABCC5O15440 1437 aa31.57■■■□□ 2.64
GTF3A-202ENST00000419181 GGT6Q6P531 493 aa31.56■■■□□ 2.64
GTF3A-202ENST00000419181 DAPK1P53355 1430 aa31.53■■■□□ 2.64
GTF3A-202ENST00000419181 PPP6R1Q9UPN7 881 aa31.53■■■□□ 2.64
GTF3A-202ENST00000419181 SETD1BQ9UPS6 1966 aaKnown RBP31.53■■■□□ 2.64
GTF3A-202ENST00000419181 KIF3BO15066 747 aa31.51■■■□□ 2.63
GTF3A-202ENST00000419181 ZMYM3Q14202 1370 aa31.5■■■□□ 2.63
GTF3A-202ENST00000419181 EIF2AK4Q9P2K8 1649 aaKnown RBP31.48■■■□□ 2.63
GTF3A-202ENST00000419181 FAM135AQ9P2D6 1515 aa31.47■■■□□ 2.63
GTF3A-202ENST00000419181 DUOX2Q9NRD8 1548 aa31.46■■■□□ 2.63
GTF3A-202ENST00000419181 HSPA2P54652 639 aa31.46■■■□□ 2.63
GTF3A-202ENST00000419181 RNF17Q9BXT8 1623 aaKnown RBP31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms