RNA–Protein interactions for RNA: ENST00000419015.1

COPS8-204, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 3

Gene COPS8, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-204ENST00000419015 MAGI2Q86UL8 1455 aa30.24■■■□□ 2.43
COPS8-204ENST00000419015 SCAPERQ9BY12 1400 aa30.22■■■□□ 2.43
COPS8-204ENST00000419015 POGZQ7Z3K3 1410 aa30.22■■■□□ 2.43
COPS8-204ENST00000419015 RIMS1Q86UR5 1692 aaKnown RBP30.2■■■□□ 2.42
COPS8-204ENST00000419015 CDK11AQ9UQ88 783 aaPredicted RBP30.19■■■□□ 2.42
COPS8-204ENST00000419015 TROQ12816 1431 aaPredicted RBP30.19■■■□□ 2.42
COPS8-204ENST00000419015 EFCAB2Q5VUJ9 269 aa30.14■■■□□ 2.42
COPS8-204ENST00000419015 PCF11O94913 1555 aaKnown RBP30.13■■■□□ 2.41
COPS8-204ENST00000419015 LMTK3Q96Q04 1460 aa30.12■■■□□ 2.41
COPS8-204ENST00000419015 CLIP1P30622 1438 aa30.09■■■□□ 2.41
COPS8-204ENST00000419015 CASKIN1Q8WXD9 1431 aa30.08■■■□□ 2.41
COPS8-204ENST00000419015 CDC42BPBQ9Y5S2 1711 aa30.08■■■□□ 2.41
COPS8-204ENST00000419015 ARHGAP5Q13017 1502 aa30.06■■■□□ 2.4
COPS8-204ENST00000419015 ATP10AO60312 1499 aa30.06■■■□□ 2.4
COPS8-204ENST00000419015 KDM5CP41229 1560 aa30.06■■■□□ 2.4
COPS8-204ENST00000419015 FER1L4A9Z1Z3 1794 aa30.05■■■□□ 2.4
COPS8-204ENST00000419015 ZNF518AQ6AHZ1 1483 aa30.05■■■□□ 2.4
COPS8-204ENST00000419015 CCDC18Q5T9S5 1454 aa30.04■■■□□ 2.4
COPS8-204ENST00000419015 C9orf84Q5VXU9 1444 aa30.03■■■□□ 2.4
COPS8-204ENST00000419015 ARHGEF12Q9NZN5 1544 aa30.01■■■□□ 2.39
COPS8-204ENST00000419015 PREX2Q70Z35 1606 aa30■■■□□ 2.39
COPS8-204ENST00000419015 MLECQ14165 292 aa29.99■■■□□ 2.39
COPS8-204ENST00000419015 AFAP1Q8N556 730 aa29.99■■■□□ 2.39
COPS8-204ENST00000419015 FYCO1Q9BQS8 1478 aa29.95■■■□□ 2.39
COPS8-204ENST00000419015 DIP2CQ9Y2E4 1556 aa29.94■■■□□ 2.38
COPS8-204ENST00000419015 CDC42BPAQ5VT25 1732 aa29.93■■■□□ 2.38
COPS8-204ENST00000419015 ABCC1P33527 1531 aa29.93■■■□□ 2.38
COPS8-204ENST00000419015 REREQ9P2R6 1566 aa29.91■■■□□ 2.38
COPS8-204ENST00000419015 MLH3Q9UHC1 1453 aa29.91■■■□□ 2.38
COPS8-204ENST00000419015 PLPPR3Q6T4P5 718 aa29.9■■■□□ 2.38
COPS8-204ENST00000419015 ITSN2Q9NZM3 1697 aa29.9■■■□□ 2.38
COPS8-204ENST00000419015 ABCA6Q8N139 1617 aa29.89■■■□□ 2.38
COPS8-204ENST00000419015 TRAPPC8Q9Y2L5 1435 aa29.88■■■□□ 2.37
COPS8-204ENST00000419015 HSPA2P54652 639 aa29.88■■■□□ 2.37
COPS8-204ENST00000419015 FBXO41Q8TF61 875 aa29.82■■■□□ 2.36
COPS8-204ENST00000419015 KIDINS220Q9ULH0 1771 aa29.82■■■□□ 2.36
COPS8-204ENST00000419015 PREX1Q8TCU6 1659 aa29.81■■■□□ 2.36
COPS8-204ENST00000419015 AGLP35573 1532 aa29.79■■■□□ 2.36
COPS8-204ENST00000419015 SAMD9LQ8IVG5 1584 aa29.78■■■□□ 2.36
COPS8-204ENST00000419015 GPATCH8Q9UKJ3 1502 aaKnown RBP29.78■■■□□ 2.36
COPS8-204ENST00000419015 CEBPAP49715 358 aaPredicted RBP29.78■■■□□ 2.36
COPS8-204ENST00000419015 MYT1LQ9UL68 1186 aa29.78■■■□□ 2.36
COPS8-204ENST00000419015 SETD1BQ9UPS6 1966 aaKnown RBP29.74■■■□□ 2.35
COPS8-204ENST00000419015 SYCP2Q9BX26 1530 aa29.71■■■□□ 2.35
COPS8-204ENST00000419015 C3P01024 1663 aa29.71■■■□□ 2.35
COPS8-204ENST00000419015 ZNF777Q9ULD5 760 aaPredicted RBP29.67■■■□□ 2.34
COPS8-204ENST00000419015 KIAA1107Q9UPP5 1409 aa29.65■■■□□ 2.34
COPS8-204ENST00000419015 STRCQ7RTU9 1775 aa29.64■■■□□ 2.34
COPS8-204ENST00000419015 UHRF1BP1Q6BDS2 1440 aa29.63■■■□□ 2.33
COPS8-204ENST00000419015 HNRNPMP52272 730 aaKnown RBP eCLIP29.63■■■□□ 2.33
COPS8-204ENST00000419015 CFDP1Q9UEE9 299 aaPredicted RBP29.61■■■□□ 2.33
COPS8-204ENST00000419015 MTUS2Q5JR59 1369 aa29.61■■■□□ 2.33
COPS8-204ENST00000419015 CCNB3Q8WWL7 1395 aa29.61■■■□□ 2.33
COPS8-204ENST00000419015 PLEKHH2Q8IVE3 1493 aa29.61■■■□□ 2.33
COPS8-204ENST00000419015 INO80Q9ULG1 1556 aaPredicted RBP29.6■■■□□ 2.33
COPS8-204ENST00000419015 SPAG9O60271 1321 aaKnown RBP29.59■■■□□ 2.33
COPS8-204ENST00000419015 ATP7AQ04656 1500 aa29.59■■■□□ 2.33
COPS8-204ENST00000419015 PLXNC1O60486 1568 aa29.57■■■□□ 2.32
COPS8-204ENST00000419015 TIAM1Q13009 1591 aa29.57■■■□□ 2.32
COPS8-204ENST00000419015 CNTLNQ9NXG0 1405 aa29.57■■■□□ 2.32
COPS8-204ENST00000419015 SUPT6HQ7KZ85 1726 aaKnown RBP29.57■■■□□ 2.32
COPS8-204ENST00000419015 EHBP1L1Q8N3D4 1523 aa29.56■■■□□ 2.32
COPS8-204ENST00000419015 CEP162Q5TB80 1403 aa29.56■■■□□ 2.32
COPS8-204ENST00000419015 MROH2AA6NES4 1674 aa29.55■■■□□ 2.32
COPS8-204ENST00000419015 ESF1Q9H501 851 aaKnown RBP29.54■■■□□ 2.32
COPS8-204ENST00000419015 CERKQ8TCT0 537 aa29.52■■■□□ 2.32
COPS8-204ENST00000419015 A2MP01023 1474 aa29.49■■■□□ 2.31
COPS8-204ENST00000419015 MBD5Q9P267 1494 aa29.49■■■□□ 2.31
COPS8-204ENST00000419015 ZNF644Q9H582 1327 aaPredicted RBP29.49■■■□□ 2.31
COPS8-204ENST00000419015 DMRT2Q9Y5R5 561 aa29.47■■■□□ 2.31
COPS8-204ENST00000419015 ADGBQ8N7X0 1667 aa29.46■■■□□ 2.31
COPS8-204ENST00000419015 NPATQ14207 1427 aa29.45■■■□□ 2.31
COPS8-204ENST00000419015 ZMYM3Q14202 1370 aa29.45■■■□□ 2.31
COPS8-204ENST00000419015 CLTCQ00610 1675 aaKnown RBP29.44■■■□□ 2.3
COPS8-204ENST00000419015 PTPRTO14522 1441 aa29.42■■■□□ 2.3
COPS8-204ENST00000419015 RTEL1-TNFRSF6BF6WH68 1400 aa29.39■■■□□ 2.3
COPS8-204ENST00000419015 NCOA1Q15788 1441 aa29.38■■■□□ 2.29
COPS8-204ENST00000419015 NCOA2Q15596 1464 aa29.38■■■□□ 2.29
COPS8-204ENST00000419015 GGT6Q6P531 493 aa29.34■■■□□ 2.29
COPS8-204ENST00000419015 PTPRKQ15262 1439 aa29.33■■■□□ 2.29
COPS8-204ENST00000419015 CAMSAP1Q5T5Y3 1602 aa29.33■■■□□ 2.29
COPS8-204ENST00000419015 ZNF142P52746 1687 aaPredicted RBP29.33■■■□□ 2.29
COPS8-204ENST00000419015 MYO3AQ8NEV4 1616 aa29.32■■■□□ 2.28
COPS8-204ENST00000419015 PPP6R1Q9UPN7 881 aa29.32■■■□□ 2.28
COPS8-204ENST00000419015 CAMSAP2Q08AD1 1489 aa29.31■■■□□ 2.28
COPS8-204ENST00000419015 DHX29Q7Z478 1369 aaKnown RBP29.31■■■□□ 2.28
COPS8-204ENST00000419015 CCDC141Q6ZP82 1450 aa29.3■■■□□ 2.28
COPS8-204ENST00000419015 LTBP4Q8N2S1 1624 aa29.29■■■□□ 2.28
COPS8-204ENST00000419015 VPS8Q8N3P4 1428 aa29.27■■■□□ 2.28
COPS8-204ENST00000419015 CEP170BQ9Y4F5 1589 aaPredicted RBP29.26■■■□□ 2.28
COPS8-204ENST00000419015 LOC105371045A0A1W2PR82 267 aa29.24■■■□□ 2.27
COPS8-204ENST00000419015 ARHGEF5Q12774 1597 aa29.24■■■□□ 2.27
COPS8-204ENST00000419015 RSPH4AQ5TD94 716 aa29.24■■■□□ 2.27
COPS8-204ENST00000419015 LRRC9Q6ZRR7 1453 aa29.23■■■□□ 2.27
COPS8-204ENST00000419015 PLA2R1Q13018 1463 aa29.23■■■□□ 2.27
COPS8-204ENST00000419015 NCKAP5LQ9HCH0 1330 aa29.19■■■□□ 2.26
COPS8-204ENST00000419015 TCOF1Q13428 1488 aaKnown RBP29.18■■■□□ 2.26
COPS8-204ENST00000419015 FAM135AQ9P2D6 1515 aa29.18■■■□□ 2.26
COPS8-204ENST00000419015 KIF3BO15066 747 aa29.17■■■□□ 2.26
COPS8-204ENST00000419015 MAP3K1Q13233 1512 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms