RNA–Protein interactions for RNA: ENST00000418983.1

HCG4-201, Transcript of HLA complex group 4, humanhuman

BASIC

Gene HCG4, Length 998 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG4-201ENST00000418983 CD109Q6YHK3 1445 aa26.03■■□□□ 1.76
HCG4-201ENST00000418983 PREX2Q70Z35 1606 aa25.99■■□□□ 1.75
HCG4-201ENST00000418983 PLCH2O75038 1416 aa25.98■■□□□ 1.75
HCG4-201ENST00000418983 CDC42BPAQ5VT25 1732 aa25.98■■□□□ 1.75
HCG4-201ENST00000418983 GPATCH8Q9UKJ3 1502 aaKnown RBP25.97■■□□□ 1.75
HCG4-201ENST00000418983 CFAP74Q9C0B2 1584 aa25.96■■□□□ 1.75
HCG4-201ENST00000418983 MYOM3Q5VTT5 1437 aa25.96■■□□□ 1.75
HCG4-201ENST00000418983 FBXO41Q8TF61 875 aa25.93■■□□□ 1.74
HCG4-201ENST00000418983 MIA2Q96PC5 1412 aa25.93■■□□□ 1.74
HCG4-201ENST00000418983 ARHGAP5Q13017 1502 aa25.93■■□□□ 1.74
HCG4-201ENST00000418983 CDC42BPBQ9Y5S2 1711 aa25.92■■□□□ 1.74
HCG4-201ENST00000418983 PPARGC1BQ86YN6 1023 aaKnown RBP25.91■■□□□ 1.74
HCG4-201ENST00000418983 PHLDB1Q86UU1 1377 aa25.9■■□□□ 1.74
HCG4-201ENST00000418983 EFCAB2Q5VUJ9 269 aa25.89■■□□□ 1.74
HCG4-201ENST00000418983 CFDP1Q9UEE9 299 aaPredicted RBP25.89■■□□□ 1.74
HCG4-201ENST00000418983 FANCAO15360 1455 aa25.89■■□□□ 1.73
HCG4-201ENST00000418983 NEO1Q92859 1461 aa25.89■■□□□ 1.73
HCG4-201ENST00000418983 FGD6Q6ZV73 1430 aa25.85■■□□□ 1.73
HCG4-201ENST00000418983 PLEKHH2Q8IVE3 1493 aa25.85■■□□□ 1.73
HCG4-201ENST00000418983 AKNAQ7Z591 1439 aa25.8■■□□□ 1.72
HCG4-201ENST00000418983 PTPN23Q9H3S7 1636 aa25.79■■□□□ 1.72
HCG4-201ENST00000418983 SAMD9LQ8IVG5 1584 aa25.78■■□□□ 1.72
HCG4-201ENST00000418983 CAMSAP2Q08AD1 1489 aa25.78■■□□□ 1.72
HCG4-201ENST00000418983 TCOF1Q13428 1488 aaKnown RBP25.78■■□□□ 1.72
HCG4-201ENST00000418983 ADAMTSL3P82987 1691 aa25.77■■□□□ 1.72
HCG4-201ENST00000418983 ZNF777Q9ULD5 760 aaPredicted RBP25.77■■□□□ 1.72
HCG4-201ENST00000418983 KIAA1107Q9UPP5 1409 aa25.77■■□□□ 1.72
HCG4-201ENST00000418983 ABCC1P33527 1531 aa25.77■■□□□ 1.72
HCG4-201ENST00000418983 RRBP1Q9P2E9 1410 aaKnown RBP25.76■■□□□ 1.71
HCG4-201ENST00000418983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.74■■□□□ 1.71
HCG4-201ENST00000418983 SYCP2Q9BX26 1530 aa25.7■■□□□ 1.7
HCG4-201ENST00000418983 RSPH4AQ5TD94 716 aa25.7■■□□□ 1.7
HCG4-201ENST00000418983 PTPRMP28827 1452 aa25.7■■□□□ 1.7
HCG4-201ENST00000418983 SCAPERQ9BY12 1400 aa25.7■■□□□ 1.7
HCG4-201ENST00000418983 ARHGEF5Q12774 1597 aa25.69■■□□□ 1.7
HCG4-201ENST00000418983 DENND4BO75064 1496 aaPredicted RBP25.68■■□□□ 1.7
HCG4-201ENST00000418983 ZNF644Q9H582 1327 aaPredicted RBP25.67■■□□□ 1.7
HCG4-201ENST00000418983 ZNF518AQ6AHZ1 1483 aa25.66■■□□□ 1.7
HCG4-201ENST00000418983 FAM50AQ14320 339 aaKnown RBP25.65■■□□□ 1.7
HCG4-201ENST00000418983 MBD5Q9P267 1494 aa25.65■■□□□ 1.7
HCG4-201ENST00000418983 POGZQ7Z3K3 1410 aa25.64■■□□□ 1.7
HCG4-201ENST00000418983 CCDC141Q6ZP82 1450 aa25.64■■□□□ 1.69
HCG4-201ENST00000418983 DNMT1P26358 1616 aaKnown RBP25.63■■□□□ 1.69
HCG4-201ENST00000418983 ARHGEF12Q9NZN5 1544 aa25.63■■□□□ 1.69
HCG4-201ENST00000418983 RICTORQ6R327 1708 aa25.61■■□□□ 1.69
HCG4-201ENST00000418983 BCORL1Q5H9F3 1711 aa25.6■■□□□ 1.69
HCG4-201ENST00000418983 HNRNPMP52272 730 aaKnown RBP eCLIP25.6■■□□□ 1.69
HCG4-201ENST00000418983 LMTK3Q96Q04 1460 aa25.6■■□□□ 1.69
HCG4-201ENST00000418983 KDM5CP41229 1560 aa25.59■■□□□ 1.69
HCG4-201ENST00000418983 TRAPPC8Q9Y2L5 1435 aa25.58■■□□□ 1.69
HCG4-201ENST00000418983 SHANK2Q9UPX8 1470 aa25.58■■□□□ 1.69
HCG4-201ENST00000418983 CROCC2H7BZ55 1655 aa25.58■■□□□ 1.68
HCG4-201ENST00000418983 DAPK1P53355 1430 aa25.57■■□□□ 1.68
HCG4-201ENST00000418983 ZMYM4Q5VZL5 1548 aa25.57■■□□□ 1.68
HCG4-201ENST00000418983 TSPY4P0CV99 314 aa25.56■■□□□ 1.68
HCG4-201ENST00000418983 TSPY10P0CW01 314 aa25.56■■□□□ 1.68
HCG4-201ENST00000418983 FRMPD1Q5SYB0 1578 aa25.56■■□□□ 1.68
HCG4-201ENST00000418983 ABCC5O15440 1437 aa25.54■■□□□ 1.68
HCG4-201ENST00000418983 MAST1Q9Y2H9 1570 aa25.54■■□□□ 1.68
HCG4-201ENST00000418983 MADDQ8WXG6 1647 aa25.54■■□□□ 1.68
HCG4-201ENST00000418983 MAGI2Q86UL8 1455 aa25.53■■□□□ 1.68
HCG4-201ENST00000418983 RAPGEF3O95398 923 aa25.52■■□□□ 1.68
HCG4-201ENST00000418983 AFAP1Q8N556 730 aa25.52■■□□□ 1.68
HCG4-201ENST00000418983 SPAG9O60271 1321 aaKnown RBP25.52■■□□□ 1.68
HCG4-201ENST00000418983 RTEL1-TNFRSF6BF6WH68 1400 aa25.52■■□□□ 1.68
HCG4-201ENST00000418983 MLH3Q9UHC1 1453 aa25.52■■□□□ 1.68
HCG4-201ENST00000418983 C9orf84Q5VXU9 1444 aa25.5■■□□□ 1.67
HCG4-201ENST00000418983 INO80Q9ULG1 1556 aaPredicted RBP25.49■■□□□ 1.67
HCG4-201ENST00000418983 ATP7AQ04656 1500 aa25.48■■□□□ 1.67
HCG4-201ENST00000418983 TRIM26Q12899 539 aaPredicted RBP25.48■■□□□ 1.67
HCG4-201ENST00000418983 ADGBQ8N7X0 1667 aa25.48■■□□□ 1.67
HCG4-201ENST00000418983 ZFYVE16Q7Z3T8 1539 aa25.47■■□□□ 1.67
HCG4-201ENST00000418983 PLXNC1O60486 1568 aa25.45■■□□□ 1.66
HCG4-201ENST00000418983 ADGRL2O95490 1459 aa25.45■■□□□ 1.66
HCG4-201ENST00000418983 MYT1LQ9UL68 1186 aa25.44■■□□□ 1.66
HCG4-201ENST00000418983 KIDINS220Q9ULH0 1771 aa25.44■■□□□ 1.66
HCG4-201ENST00000418983 ROCK1Q13464 1354 aa25.44■■□□□ 1.66
HCG4-201ENST00000418983 ANKRD30AQ9BXX3 1397 aa25.44■■□□□ 1.66
HCG4-201ENST00000418983 ITGAEP38570 1179 aa25.42■■□□□ 1.66
HCG4-201ENST00000418983 ARHGEF40Q8TER5 1519 aa25.41■■□□□ 1.66
HCG4-201ENST00000418983 RIMS1Q86UR5 1692 aaKnown RBP25.4■■□□□ 1.66
HCG4-201ENST00000418983 PTPRKQ15262 1439 aa25.39■■□□□ 1.66
HCG4-201ENST00000418983 ABCA6Q8N139 1617 aa25.37■■□□□ 1.65
HCG4-201ENST00000418983 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
HCG4-201ENST00000418983 DIP2CQ9Y2E4 1556 aa25.36■■□□□ 1.65
HCG4-201ENST00000418983 CHIC2Q9UKJ5 165 aa25.36■■□□□ 1.65
HCG4-201ENST00000418983 REREQ9P2R6 1566 aa25.34■■□□□ 1.65
HCG4-201ENST00000418983 ATP10AO60312 1499 aa25.34■■□□□ 1.65
HCG4-201ENST00000418983 KIF15Q9NS87 1388 aa25.33■■□□□ 1.65
HCG4-201ENST00000418983 DUOX2Q9NRD8 1548 aa25.33■■□□□ 1.65
HCG4-201ENST00000418983 YEATS2Q9ULM3 1422 aa25.33■■□□□ 1.65
HCG4-201ENST00000418983 A2MP01023 1474 aa25.3■■□□□ 1.64
HCG4-201ENST00000418983 GCC2Q8IWJ2 1684 aa25.29■■□□□ 1.64
HCG4-201ENST00000418983 HFM1A2PYH4 1435 aa25.29■■□□□ 1.64
HCG4-201ENST00000418983 SIGLEC1Q9BZZ2 1709 aa25.29■■□□□ 1.64
HCG4-201ENST00000418983 ERBINQ96RT1 1412 aa25.29■■□□□ 1.64
HCG4-201ENST00000418983 RRP7BPQ9NSQ0 103 aa25.28■■□□□ 1.64
HCG4-201ENST00000418983 DHX29Q7Z478 1369 aaKnown RBP25.28■■□□□ 1.64
HCG4-201ENST00000418983 CERKQ8TCT0 537 aa25.27■■□□□ 1.64
HCG4-201ENST00000418983 EIF2AK4Q9P2K8 1649 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms