RNA–Protein interactions for RNA: ENST00000418511.6

TMEM253-201, Transcript of transmembrane protein 253, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TMEM253, Length 1,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-201ENST00000418511 ARAP3Q8WWN8 1544 aa19.18■□□□□ 0.66
TMEM253-201ENST00000418511 FANCAO15360 1455 aa19.18■□□□□ 0.66
TMEM253-201ENST00000418511 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
TMEM253-201ENST00000418511 CFAP74Q9C0B2 1584 aa19.17■□□□□ 0.66
TMEM253-201ENST00000418511 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
TMEM253-201ENST00000418511 NEO1Q92859 1461 aa19.14■□□□□ 0.66
TMEM253-201ENST00000418511 AKNAQ7Z591 1439 aa19.12■□□□□ 0.65
TMEM253-201ENST00000418511 SAMD9LQ8IVG5 1584 aa19.12■□□□□ 0.65
TMEM253-201ENST00000418511 EFCAB2Q5VUJ9 269 aa19.1■□□□□ 0.65
TMEM253-201ENST00000418511 PHLDB1Q86UU1 1377 aa19.1■□□□□ 0.65
TMEM253-201ENST00000418511 ADGRL1O94910 1474 aa19.09■□□□□ 0.65
TMEM253-201ENST00000418511 CFDP1Q9UEE9 299 aaPredicted RBP19.09■□□□□ 0.65
TMEM253-201ENST00000418511 ZNF777Q9ULD5 760 aaPredicted RBP19.09■□□□□ 0.65
TMEM253-201ENST00000418511 ABCC1P33527 1531 aa19.08■□□□□ 0.64
TMEM253-201ENST00000418511 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.64
TMEM253-201ENST00000418511 FRMPD1Q5SYB0 1578 aa19.07■□□□□ 0.64
TMEM253-201ENST00000418511 RICTORQ6R327 1708 aa19.07■□□□□ 0.64
TMEM253-201ENST00000418511 ZNF644Q9H582 1327 aaPredicted RBP19.05■□□□□ 0.64
TMEM253-201ENST00000418511 SYCP2Q9BX26 1530 aa19.05■□□□□ 0.64
TMEM253-201ENST00000418511 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
TMEM253-201ENST00000418511 SCAPERQ9BY12 1400 aa19.05■□□□□ 0.64
TMEM253-201ENST00000418511 RAPGEF3O95398 923 aa19.03■□□□□ 0.64
TMEM253-201ENST00000418511 AEBP2Q6ZN18 517 aaPredicted RBP19.03■□□□□ 0.64
TMEM253-201ENST00000418511 DENND4BO75064 1496 aaPredicted RBP19.03■□□□□ 0.64
TMEM253-201ENST00000418511 CAMSAP2Q08AD1 1489 aa19.03■□□□□ 0.64
TMEM253-201ENST00000418511 PTPN23Q9H3S7 1636 aa19.02■□□□□ 0.63
TMEM253-201ENST00000418511 FGD6Q6ZV73 1430 aa19.01■□□□□ 0.63
TMEM253-201ENST00000418511 POGZQ7Z3K3 1410 aa19.01■□□□□ 0.63
TMEM253-201ENST00000418511 KDM4FA0A1W2PPD8 638 aa19■□□□□ 0.63
TMEM253-201ENST00000418511 MIA2Q96PC5 1412 aa19■□□□□ 0.63
TMEM253-201ENST00000418511 TRAPPC8Q9Y2L5 1435 aa18.99■□□□□ 0.63
TMEM253-201ENST00000418511 HNRNPMP52272 730 aaKnown RBP eCLIP18.98■□□□□ 0.63
TMEM253-201ENST00000418511 PLEKHH2Q8IVE3 1493 aa18.98■□□□□ 0.63
TMEM253-201ENST00000418511 KIAA1107Q9UPP5 1409 aa18.96■□□□□ 0.63
TMEM253-201ENST00000418511 KDM5CP41229 1560 aa18.96■□□□□ 0.63
TMEM253-201ENST00000418511 ZNF518AQ6AHZ1 1483 aa18.96■□□□□ 0.63
TMEM253-201ENST00000418511 MBD5Q9P267 1494 aa18.96■□□□□ 0.63
TMEM253-201ENST00000418511 AFAP1Q8N556 730 aa18.95■□□□□ 0.62
TMEM253-201ENST00000418511 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
TMEM253-201ENST00000418511 TCOF1Q13428 1488 aaKnown RBP18.94■□□□□ 0.62
TMEM253-201ENST00000418511 ARHGEF5Q12774 1597 aa18.92■□□□□ 0.62
TMEM253-201ENST00000418511 HECW2Q9P2P5 1572 aa18.92■□□□□ 0.62
TMEM253-201ENST00000418511 KIDINS220Q9ULH0 1771 aa18.9■□□□□ 0.62
TMEM253-201ENST00000418511 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
TMEM253-201ENST00000418511 CROCC2H7BZ55 1655 aa18.9■□□□□ 0.62
TMEM253-201ENST00000418511 YEATS2Q9ULM3 1422 aa18.89■□□□□ 0.61
TMEM253-201ENST00000418511 ARHGEF40Q8TER5 1519 aa18.89■□□□□ 0.61
TMEM253-201ENST00000418511 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
TMEM253-201ENST00000418511 DNMT1P26358 1616 aaKnown RBP18.89■□□□□ 0.61
TMEM253-201ENST00000418511 INO80Q9ULG1 1556 aaPredicted RBP18.88■□□□□ 0.61
TMEM253-201ENST00000418511 ZFYVE16Q7Z3T8 1539 aa18.88■□□□□ 0.61
TMEM253-201ENST00000418511 ABCA6Q8N139 1617 aa18.87■□□□□ 0.61
TMEM253-201ENST00000418511 ATP7AQ04656 1500 aa18.86■□□□□ 0.61
TMEM253-201ENST00000418511 RRBP1Q9P2E9 1410 aaKnown RBP18.86■□□□□ 0.61
TMEM253-201ENST00000418511 MLH3Q9UHC1 1453 aa18.86■□□□□ 0.61
TMEM253-201ENST00000418511 MAGI2Q86UL8 1455 aa18.85■□□□□ 0.61
TMEM253-201ENST00000418511 MYT1LQ9UL68 1186 aa18.84■□□□□ 0.61
TMEM253-201ENST00000418511 ABCC5O15440 1437 aa18.84■□□□□ 0.61
TMEM253-201ENST00000418511 DAPK1P53355 1430 aa18.84■□□□□ 0.61
TMEM253-201ENST00000418511 DIP2CQ9Y2E4 1556 aa18.84■□□□□ 0.61
TMEM253-201ENST00000418511 SPAG9O60271 1321 aaKnown RBP18.84■□□□□ 0.61
TMEM253-201ENST00000418511 SIGLEC1Q9BZZ2 1709 aa18.84■□□□□ 0.61
TMEM253-201ENST00000418511 MAST1Q9Y2H9 1570 aa18.82■□□□□ 0.6
TMEM253-201ENST00000418511 ADGBQ8N7X0 1667 aa18.81■□□□□ 0.6
TMEM253-201ENST00000418511 RSPH4AQ5TD94 716 aa18.81■□□□□ 0.6
TMEM253-201ENST00000418511 C9orf84Q5VXU9 1444 aa18.8■□□□□ 0.6
TMEM253-201ENST00000418511 SHANK2Q9UPX8 1470 aa18.79■□□□□ 0.6
TMEM253-201ENST00000418511 TSPY4P0CV99 314 aa18.78■□□□□ 0.6
TMEM253-201ENST00000418511 TSPY10P0CW01 314 aa18.78■□□□□ 0.6
TMEM253-201ENST00000418511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
TMEM253-201ENST00000418511 RTEL1-TNFRSF6BF6WH68 1400 aa18.78■□□□□ 0.6
TMEM253-201ENST00000418511 ATP10AO60312 1499 aa18.78■□□□□ 0.6
TMEM253-201ENST00000418511 PTPRKQ15262 1439 aa18.77■□□□□ 0.6
TMEM253-201ENST00000418511 ITGAEP38570 1179 aa18.76■□□□□ 0.59
TMEM253-201ENST00000418511 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
TMEM253-201ENST00000418511 PLXNC1O60486 1568 aa18.75■□□□□ 0.59
TMEM253-201ENST00000418511 CHIC2Q9UKJ5 165 aa18.75■□□□□ 0.59
TMEM253-201ENST00000418511 BCORL1Q5H9F3 1711 aa18.74■□□□□ 0.59
TMEM253-201ENST00000418511 REREQ9P2R6 1566 aa18.73■□□□□ 0.59
TMEM253-201ENST00000418511 A2MP01023 1474 aa18.72■□□□□ 0.59
TMEM253-201ENST00000418511 ADGRL2O95490 1459 aa18.7■□□□□ 0.58
TMEM253-201ENST00000418511 ARID4BQ4LE39 1312 aaPredicted RBP18.69■□□□□ 0.58
TMEM253-201ENST00000418511 NCOA1Q15788 1441 aa18.68■□□□□ 0.58
TMEM253-201ENST00000418511 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
TMEM253-201ENST00000418511 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
TMEM253-201ENST00000418511 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
TMEM253-201ENST00000418511 MADDQ8WXG6 1647 aa18.66■□□□□ 0.58
TMEM253-201ENST00000418511 AGLP35573 1532 aa18.66■□□□□ 0.58
TMEM253-201ENST00000418511 DUOX2Q9NRD8 1548 aa18.66■□□□□ 0.58
TMEM253-201ENST00000418511 DHX29Q7Z478 1369 aaKnown RBP18.65■□□□□ 0.58
TMEM253-201ENST00000418511 MLECQ14165 292 aa18.64■□□□□ 0.57
TMEM253-201ENST00000418511 ROCK1Q13464 1354 aa18.63■□□□□ 0.57
TMEM253-201ENST00000418511 EIF2AK4Q9P2K8 1649 aaKnown RBP18.62■□□□□ 0.57
TMEM253-201ENST00000418511 PTPRMP28827 1452 aa18.62■□□□□ 0.57
TMEM253-201ENST00000418511 FER1L4A9Z1Z3 1794 aa18.61■□□□□ 0.57
TMEM253-201ENST00000418511 RIMS1Q86UR5 1692 aaKnown RBP18.6■□□□□ 0.57
TMEM253-201ENST00000418511 GCC2Q8IWJ2 1684 aa18.6■□□□□ 0.57
TMEM253-201ENST00000418511 ERBINQ96RT1 1412 aa18.6■□□□□ 0.57
TMEM253-201ENST00000418511 KIF3BO15066 747 aa18.59■□□□□ 0.57
TMEM253-201ENST00000418511 RNF17Q9BXT8 1623 aaKnown RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms