RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
RFC1-203ENST00000418436 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
RFC1-203ENST00000418436 CFAP43Q8NDM7 1665 aa16.94■□□□□ 0.3
RFC1-203ENST00000418436 CDK13Q14004 1512 aaKnown RBP16.93■□□□□ 0.3
RFC1-203ENST00000418436 PCF11O94913 1555 aaKnown RBP16.93■□□□□ 0.3
RFC1-203ENST00000418436 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
RFC1-203ENST00000418436 ABCA9Q8IUA7 1624 aa16.9■□□□□ 0.3
RFC1-203ENST00000418436 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
RFC1-203ENST00000418436 FYCO1Q9BQS8 1478 aa16.9■□□□□ 0.3
RFC1-203ENST00000418436 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
RFC1-203ENST00000418436 ATXN8OSP0DMR3 200 aa16.88■□□□□ 0.29
RFC1-203ENST00000418436 MAGI3Q5TCQ9 1506 aa16.87■□□□□ 0.29
RFC1-203ENST00000418436 CD109Q6YHK3 1445 aa16.87■□□□□ 0.29
RFC1-203ENST00000418436 CCDC18Q5T9S5 1454 aa16.86■□□□□ 0.29
RFC1-203ENST00000418436 TEX14Q8IWB6 1497 aa16.85■□□□□ 0.29
RFC1-203ENST00000418436 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
RFC1-203ENST00000418436 KDM6BO15054 1643 aa16.82■□□□□ 0.28
RFC1-203ENST00000418436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.82■□□□□ 0.28
RFC1-203ENST00000418436 POLA2Q14181 598 aa16.82■□□□□ 0.28
RFC1-203ENST00000418436 TROQ12816 1431 aaPredicted RBP16.8■□□□□ 0.28
RFC1-203ENST00000418436 TTC37Q6PGP7 1564 aa16.79■□□□□ 0.28
RFC1-203ENST00000418436 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
RFC1-203ENST00000418436 KIF14Q15058 1648 aa16.78■□□□□ 0.28
RFC1-203ENST00000418436 COL17A1Q9UMD9 1497 aaPredicted RBP16.77■□□□□ 0.28
RFC1-203ENST00000418436 PHLDB1Q86UU1 1377 aa16.74■□□□□ 0.27
RFC1-203ENST00000418436 NEO1Q92859 1461 aa16.73■□□□□ 0.27
RFC1-203ENST00000418436 ARAP3Q8WWN8 1544 aa16.73■□□□□ 0.27
RFC1-203ENST00000418436 MYO5CQ9NQX4 1742 aa16.73■□□□□ 0.27
RFC1-203ENST00000418436 PLCH2O75038 1416 aa16.71■□□□□ 0.27
RFC1-203ENST00000418436 CFAP74Q9C0B2 1584 aa16.71■□□□□ 0.27
RFC1-203ENST00000418436 FANCAO15360 1455 aa16.69■□□□□ 0.26
RFC1-203ENST00000418436 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
RFC1-203ENST00000418436 CDC42BPBQ9Y5S2 1711 aa16.67■□□□□ 0.26
RFC1-203ENST00000418436 MAP3K1Q13233 1512 aa16.66■□□□□ 0.26
RFC1-203ENST00000418436 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
RFC1-203ENST00000418436 CDC42BPAQ5VT25 1732 aa16.66■□□□□ 0.26
RFC1-203ENST00000418436 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
RFC1-203ENST00000418436 PREX2Q70Z35 1606 aa16.66■□□□□ 0.26
RFC1-203ENST00000418436 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
RFC1-203ENST00000418436 EFCAB2Q5VUJ9 269 aa16.63■□□□□ 0.25
RFC1-203ENST00000418436 RICTORQ6R327 1708 aa16.62■□□□□ 0.25
RFC1-203ENST00000418436 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
RFC1-203ENST00000418436 FRMPD1Q5SYB0 1578 aa16.62■□□□□ 0.25
RFC1-203ENST00000418436 GPATCH8Q9UKJ3 1502 aaKnown RBP16.61■□□□□ 0.25
RFC1-203ENST00000418436 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
RFC1-203ENST00000418436 DENND4BO75064 1496 aaPredicted RBP16.6■□□□□ 0.25
RFC1-203ENST00000418436 ADGRL1O94910 1474 aa16.6■□□□□ 0.25
RFC1-203ENST00000418436 SUPT6HQ7KZ85 1726 aaKnown RBP16.59■□□□□ 0.25
RFC1-203ENST00000418436 RAPGEF3O95398 923 aa16.59■□□□□ 0.25
RFC1-203ENST00000418436 SCAPERQ9BY12 1400 aa16.57■□□□□ 0.24
RFC1-203ENST00000418436 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
RFC1-203ENST00000418436 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
RFC1-203ENST00000418436 ITSN2Q9NZM3 1697 aa16.56■□□□□ 0.24
RFC1-203ENST00000418436 NCOA2Q15596 1464 aa16.55■□□□□ 0.24
RFC1-203ENST00000418436 KANK4Q5T7N3 995 aaPredicted RBP16.55■□□□□ 0.24
RFC1-203ENST00000418436 ZMYM4Q5VZL5 1548 aa16.55■□□□□ 0.24
RFC1-203ENST00000418436 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
RFC1-203ENST00000418436 SAMD9LQ8IVG5 1584 aa16.54■□□□□ 0.24
RFC1-203ENST00000418436 ABCC1P33527 1531 aa16.54■□□□□ 0.24
RFC1-203ENST00000418436 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
RFC1-203ENST00000418436 CFDP1Q9UEE9 299 aaPredicted RBP16.51■□□□□ 0.23
RFC1-203ENST00000418436 KDM5CP41229 1560 aa16.51■□□□□ 0.23
RFC1-203ENST00000418436 ZNF518AQ6AHZ1 1483 aa16.5■□□□□ 0.23
RFC1-203ENST00000418436 MAGI2Q86UL8 1455 aa16.5■□□□□ 0.23
RFC1-203ENST00000418436 PLEKHH2Q8IVE3 1493 aa16.48■□□□□ 0.23
RFC1-203ENST00000418436 KIAA1107Q9UPP5 1409 aa16.48■□□□□ 0.23
RFC1-203ENST00000418436 ZNF777Q9ULD5 760 aaPredicted RBP16.48■□□□□ 0.23
RFC1-203ENST00000418436 ARHGEF40Q8TER5 1519 aa16.48■□□□□ 0.23
RFC1-203ENST00000418436 TRAPPC8Q9Y2L5 1435 aa16.47■□□□□ 0.23
RFC1-203ENST00000418436 AFAP1Q8N556 730 aa16.47■□□□□ 0.23
RFC1-203ENST00000418436 ZFYVE16Q7Z3T8 1539 aa16.46■□□□□ 0.23
RFC1-203ENST00000418436 SYCP2Q9BX26 1530 aa16.46■□□□□ 0.23
RFC1-203ENST00000418436 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
RFC1-203ENST00000418436 YEATS2Q9ULM3 1422 aa16.45■□□□□ 0.22
RFC1-203ENST00000418436 HECW2Q9P2P5 1572 aa16.44■□□□□ 0.22
RFC1-203ENST00000418436 MLH3Q9UHC1 1453 aa16.44■□□□□ 0.22
RFC1-203ENST00000418436 ZNF644Q9H582 1327 aaPredicted RBP16.44■□□□□ 0.22
RFC1-203ENST00000418436 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
RFC1-203ENST00000418436 MYOM3Q5VTT5 1437 aa16.43■□□□□ 0.22
RFC1-203ENST00000418436 MBD5Q9P267 1494 aa16.42■□□□□ 0.22
RFC1-203ENST00000418436 KDM4FA0A1W2PPD8 638 aa16.42■□□□□ 0.22
RFC1-203ENST00000418436 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
RFC1-203ENST00000418436 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
RFC1-203ENST00000418436 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
RFC1-203ENST00000418436 SIGLEC1Q9BZZ2 1709 aa16.4■□□□□ 0.22
RFC1-203ENST00000418436 ATP10AO60312 1499 aa16.4■□□□□ 0.22
RFC1-203ENST00000418436 DIP2CQ9Y2E4 1556 aa16.38■□□□□ 0.21
RFC1-203ENST00000418436 ABCA6Q8N139 1617 aa16.38■□□□□ 0.21
RFC1-203ENST00000418436 ARHGEF5Q12774 1597 aa16.38■□□□□ 0.21
RFC1-203ENST00000418436 REREQ9P2R6 1566 aa16.38■□□□□ 0.21
RFC1-203ENST00000418436 INO80Q9ULG1 1556 aaPredicted RBP16.38■□□□□ 0.21
RFC1-203ENST00000418436 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
RFC1-203ENST00000418436 BCORL1Q5H9F3 1711 aa16.36■□□□□ 0.21
RFC1-203ENST00000418436 RSPH4AQ5TD94 716 aa16.36■□□□□ 0.21
RFC1-203ENST00000418436 SPAG9O60271 1321 aaKnown RBP16.36■□□□□ 0.21
RFC1-203ENST00000418436 ATP7AQ04656 1500 aa16.35■□□□□ 0.21
RFC1-203ENST00000418436 ADAMTSL3P82987 1691 aa16.35■□□□□ 0.21
RFC1-203ENST00000418436 CCDC141Q6ZP82 1450 aa16.35■□□□□ 0.21
RFC1-203ENST00000418436 RTEL1-TNFRSF6BF6WH68 1400 aa16.34■□□□□ 0.21
RFC1-203ENST00000418436 PTPN23Q9H3S7 1636 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms