RNA–Protein interactions for RNA: ENST00000418373.1

PDLIM4-203, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-203ENST00000418373 POGZQ7Z3K3 1410 aa21.17■□□□□ 0.98
PDLIM4-203ENST00000418373 PCF11O94913 1555 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-203ENST00000418373 LMTK3Q96Q04 1460 aa21.15■□□□□ 0.98
PDLIM4-203ENST00000418373 SCAPERQ9BY12 1400 aa21.13■□□□□ 0.97
PDLIM4-203ENST00000418373 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
PDLIM4-203ENST00000418373 TROQ12816 1431 aaPredicted RBP21.11■□□□□ 0.97
PDLIM4-203ENST00000418373 FER1L4A9Z1Z3 1794 aa21.1■□□□□ 0.97
PDLIM4-203ENST00000418373 KDM5CP41229 1560 aa21.07■□□□□ 0.96
PDLIM4-203ENST00000418373 CDK11AQ9UQ88 783 aaPredicted RBP21.07■□□□□ 0.96
PDLIM4-203ENST00000418373 CDC42BPBQ9Y5S2 1711 aa21.07■□□□□ 0.96
PDLIM4-203ENST00000418373 EFCAB2Q5VUJ9 269 aa21.06■□□□□ 0.96
PDLIM4-203ENST00000418373 ATP1B4Q9UN42 357 aaPredicted RBP21.06■□□□□ 0.96
PDLIM4-203ENST00000418373 ATP10AO60312 1499 aa21.05■□□□□ 0.96
PDLIM4-203ENST00000418373 ARHGAP5Q13017 1502 aa21.04■□□□□ 0.96
PDLIM4-203ENST00000418373 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
PDLIM4-203ENST00000418373 ZNF518AQ6AHZ1 1483 aa21.04■□□□□ 0.96
PDLIM4-203ENST00000418373 CLIP1P30622 1438 aa21.04■□□□□ 0.96
PDLIM4-203ENST00000418373 C9orf84Q5VXU9 1444 aa21.04■□□□□ 0.96
PDLIM4-203ENST00000418373 PREX2Q70Z35 1606 aa21.03■□□□□ 0.96
PDLIM4-203ENST00000418373 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.96
PDLIM4-203ENST00000418373 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
PDLIM4-203ENST00000418373 REREQ9P2R6 1566 aa20.98■□□□□ 0.95
PDLIM4-203ENST00000418373 DIP2CQ9Y2E4 1556 aa20.98■□□□□ 0.95
PDLIM4-203ENST00000418373 CDC42BPAQ5VT25 1732 aa20.97■□□□□ 0.95
PDLIM4-203ENST00000418373 ABCC1P33527 1531 aa20.97■□□□□ 0.95
PDLIM4-203ENST00000418373 ITSN2Q9NZM3 1697 aa20.96■□□□□ 0.95
PDLIM4-203ENST00000418373 MLECQ14165 292 aa20.96■□□□□ 0.95
PDLIM4-203ENST00000418373 ABCA6Q8N139 1617 aa20.96■□□□□ 0.95
PDLIM4-203ENST00000418373 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
PDLIM4-203ENST00000418373 PREX1Q8TCU6 1659 aa20.94■□□□□ 0.94
PDLIM4-203ENST00000418373 AFAP1Q8N556 730 aa20.94■□□□□ 0.94
PDLIM4-203ENST00000418373 FBXO41Q8TF61 875 aa20.94■□□□□ 0.94
PDLIM4-203ENST00000418373 MLH3Q9UHC1 1453 aa20.94■□□□□ 0.94
PDLIM4-203ENST00000418373 HSPA2P54652 639 aa20.93■□□□□ 0.94
PDLIM4-203ENST00000418373 TRAPPC8Q9Y2L5 1435 aa20.9■□□□□ 0.94
PDLIM4-203ENST00000418373 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
PDLIM4-203ENST00000418373 KIDINS220Q9ULH0 1771 aa20.9■□□□□ 0.94
PDLIM4-203ENST00000418373 SETD1BQ9UPS6 1966 aaKnown RBP20.88■□□□□ 0.93
PDLIM4-203ENST00000418373 AGLP35573 1532 aa20.88■□□□□ 0.93
PDLIM4-203ENST00000418373 C3P01024 1663 aa20.85■□□□□ 0.93
PDLIM4-203ENST00000418373 SAMD9LQ8IVG5 1584 aa20.85■□□□□ 0.93
PDLIM4-203ENST00000418373 STRCQ7RTU9 1775 aa20.82■□□□□ 0.92
PDLIM4-203ENST00000418373 CEBPAP49715 358 aaPredicted RBP20.82■□□□□ 0.92
PDLIM4-203ENST00000418373 GPATCH8Q9UKJ3 1502 aaKnown RBP20.81■□□□□ 0.92
PDLIM4-203ENST00000418373 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
PDLIM4-203ENST00000418373 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
PDLIM4-203ENST00000418373 UHRF1BP1Q6BDS2 1440 aa20.77■□□□□ 0.91
PDLIM4-203ENST00000418373 INO80Q9ULG1 1556 aaPredicted RBP20.75■□□□□ 0.91
PDLIM4-203ENST00000418373 MROH2AA6NES4 1674 aa20.74■□□□□ 0.91
PDLIM4-203ENST00000418373 KIAA1107Q9UPP5 1409 aa20.73■□□□□ 0.91
PDLIM4-203ENST00000418373 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
PDLIM4-203ENST00000418373 PLXNC1O60486 1568 aa20.72■□□□□ 0.91
PDLIM4-203ENST00000418373 CNTLNQ9NXG0 1405 aa20.72■□□□□ 0.91
PDLIM4-203ENST00000418373 SUPT6HQ7KZ85 1726 aaKnown RBP20.72■□□□□ 0.91
PDLIM4-203ENST00000418373 PLEKHH2Q8IVE3 1493 aa20.71■□□□□ 0.91
PDLIM4-203ENST00000418373 CERKQ8TCT0 537 aa20.71■□□□□ 0.91
PDLIM4-203ENST00000418373 ZNF777Q9ULD5 760 aaPredicted RBP20.7■□□□□ 0.9
PDLIM4-203ENST00000418373 TIAM1Q13009 1591 aa20.69■□□□□ 0.9
PDLIM4-203ENST00000418373 SPAG9O60271 1321 aaKnown RBP20.68■□□□□ 0.9
PDLIM4-203ENST00000418373 HNRNPMP52272 730 aaKnown RBP eCLIP20.67■□□□□ 0.9
PDLIM4-203ENST00000418373 CCNB3Q8WWL7 1395 aa20.67■□□□□ 0.9
PDLIM4-203ENST00000418373 EHBP1L1Q8N3D4 1523 aa20.67■□□□□ 0.9
PDLIM4-203ENST00000418373 CFDP1Q9UEE9 299 aaPredicted RBP20.66■□□□□ 0.9
PDLIM4-203ENST00000418373 MTUS2Q5JR59 1369 aa20.66■□□□□ 0.9
PDLIM4-203ENST00000418373 ADGBQ8N7X0 1667 aa20.65■□□□□ 0.9
PDLIM4-203ENST00000418373 NPATQ14207 1427 aa20.65■□□□□ 0.9
PDLIM4-203ENST00000418373 CLTCQ00610 1675 aaKnown RBP20.64■□□□□ 0.9
PDLIM4-203ENST00000418373 ESF1Q9H501 851 aaKnown RBP20.64■□□□□ 0.89
PDLIM4-203ENST00000418373 DMRT2Q9Y5R5 561 aa20.64■□□□□ 0.89
PDLIM4-203ENST00000418373 A2MP01023 1474 aa20.63■□□□□ 0.89
PDLIM4-203ENST00000418373 PTPRTO14522 1441 aa20.63■□□□□ 0.89
PDLIM4-203ENST00000418373 MBD5Q9P267 1494 aa20.62■□□□□ 0.89
PDLIM4-203ENST00000418373 NCOA1Q15788 1441 aa20.61■□□□□ 0.89
PDLIM4-203ENST00000418373 CEP162Q5TB80 1403 aa20.61■□□□□ 0.89
PDLIM4-203ENST00000418373 ZNF142P52746 1687 aaPredicted RBP20.61■□□□□ 0.89
PDLIM4-203ENST00000418373 ZMYM3Q14202 1370 aa20.6■□□□□ 0.89
PDLIM4-203ENST00000418373 MYO3AQ8NEV4 1616 aa20.58■□□□□ 0.89
PDLIM4-203ENST00000418373 ZNF644Q9H582 1327 aaPredicted RBP20.57■□□□□ 0.88
PDLIM4-203ENST00000418373 LTBP4Q8N2S1 1624 aa20.57■□□□□ 0.88
PDLIM4-203ENST00000418373 CAMSAP1Q5T5Y3 1602 aa20.56■□□□□ 0.88
PDLIM4-203ENST00000418373 RTEL1-TNFRSF6BF6WH68 1400 aa20.55■□□□□ 0.88
PDLIM4-203ENST00000418373 PTPRKQ15262 1439 aa20.54■□□□□ 0.88
PDLIM4-203ENST00000418373 CEP170BQ9Y4F5 1589 aaPredicted RBP20.52■□□□□ 0.88
PDLIM4-203ENST00000418373 NCOA2Q15596 1464 aa20.52■□□□□ 0.88
PDLIM4-203ENST00000418373 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
PDLIM4-203ENST00000418373 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
PDLIM4-203ENST00000418373 PLA2R1Q13018 1463 aa20.5■□□□□ 0.87
PDLIM4-203ENST00000418373 CCDC141Q6ZP82 1450 aa20.5■□□□□ 0.87
PDLIM4-203ENST00000418373 IQSEC2Q5JU85 1478 aa20.49■□□□□ 0.87
PDLIM4-203ENST00000418373 GGT6Q6P531 493 aa20.48■□□□□ 0.87
PDLIM4-203ENST00000418373 DHX29Q7Z478 1369 aaKnown RBP20.47■□□□□ 0.87
PDLIM4-203ENST00000418373 TCOF1Q13428 1488 aaKnown RBP20.47■□□□□ 0.87
PDLIM4-203ENST00000418373 ARHGEF5Q12774 1597 aa20.46■□□□□ 0.87
PDLIM4-203ENST00000418373 FAM135AQ9P2D6 1515 aa20.46■□□□□ 0.87
PDLIM4-203ENST00000418373 KDM5DQ9BY66 1539 aa20.43■□□□□ 0.86
PDLIM4-203ENST00000418373 DNMT1P26358 1616 aaKnown RBP20.42■□□□□ 0.86
PDLIM4-203ENST00000418373 NCKAP5LQ9HCH0 1330 aa20.42■□□□□ 0.86
PDLIM4-203ENST00000418373 A2ML1A8K2U0 1454 aa20.42■□□□□ 0.86
PDLIM4-203ENST00000418373 VPS8Q8N3P4 1428 aa20.41■□□□□ 0.86
PDLIM4-203ENST00000418373 LRRC9Q6ZRR7 1453 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms