RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 POGZQ7Z3K3 1410 aa33.11■■■□□ 2.89
PKNOX1-202ENST00000418336 CDC42BPAQ5VT25 1732 aa33.11■■■□□ 2.89
PKNOX1-202ENST00000418336 SCAPERQ9BY12 1400 aa33.11■■■□□ 2.89
PKNOX1-202ENST00000418336 ARHGAP5Q13017 1502 aa33.1■■■□□ 2.89
PKNOX1-202ENST00000418336 VPS8Q8N3P4 1428 aa33.1■■■□□ 2.89
PKNOX1-202ENST00000418336 EFCAB2Q5VUJ9 269 aa33.09■■■□□ 2.89
PKNOX1-202ENST00000418336 ARHGEF40Q8TER5 1519 aa33.07■■■□□ 2.89
PKNOX1-202ENST00000418336 GPATCH8Q9UKJ3 1502 aaKnown RBP33.04■■■□□ 2.88
PKNOX1-202ENST00000418336 ARHGEF12Q9NZN5 1544 aa33.02■■■□□ 2.88
PKNOX1-202ENST00000418336 EHBP1L1Q8N3D4 1523 aa33.02■■■□□ 2.88
PKNOX1-202ENST00000418336 ABCC1P33527 1531 aa33.01■■■□□ 2.87
PKNOX1-202ENST00000418336 YEATS2Q9ULM3 1422 aa33■■■□□ 2.87
PKNOX1-202ENST00000418336 KDM5CP41229 1560 aa33■■■□□ 2.87
PKNOX1-202ENST00000418336 TIAM1Q13009 1591 aa33■■■□□ 2.87
PKNOX1-202ENST00000418336 MAGI2Q86UL8 1455 aa32.99■■■□□ 2.87
PKNOX1-202ENST00000418336 SIGLEC1Q9BZZ2 1709 aa32.99■■■□□ 2.87
PKNOX1-202ENST00000418336 MTUS2Q5JR59 1369 aa32.98■■■□□ 2.87
PKNOX1-202ENST00000418336 ZFYVE16Q7Z3T8 1539 aa32.97■■■□□ 2.87
PKNOX1-202ENST00000418336 SAMD9LQ8IVG5 1584 aa32.96■■■□□ 2.87
PKNOX1-202ENST00000418336 ITSN2Q9NZM3 1697 aa32.94■■■□□ 2.86
PKNOX1-202ENST00000418336 ZNF518AQ6AHZ1 1483 aa32.94■■■□□ 2.86
PKNOX1-202ENST00000418336 TRAPPC8Q9Y2L5 1435 aa32.92■■■□□ 2.86
PKNOX1-202ENST00000418336 ADAMTSL3P82987 1691 aa32.91■■■□□ 2.86
PKNOX1-202ENST00000418336 MAP3K1Q13233 1512 aa32.89■■■□□ 2.86
PKNOX1-202ENST00000418336 AFAP1Q8N556 730 aa32.89■■■□□ 2.86
PKNOX1-202ENST00000418336 BCORL1Q5H9F3 1711 aa32.88■■■□□ 2.85
PKNOX1-202ENST00000418336 CCNB3Q8WWL7 1395 aa32.86■■■□□ 2.85
PKNOX1-202ENST00000418336 LRRC9Q6ZRR7 1453 aa32.85■■■□□ 2.85
PKNOX1-202ENST00000418336 NCOA2Q15596 1464 aa32.84■■■□□ 2.85
PKNOX1-202ENST00000418336 MLH3Q9UHC1 1453 aa32.84■■■□□ 2.85
PKNOX1-202ENST00000418336 HECW2Q9P2P5 1572 aa32.83■■■□□ 2.85
PKNOX1-202ENST00000418336 SYCP2Q9BX26 1530 aa32.82■■■□□ 2.85
PKNOX1-202ENST00000418336 SUPT6HQ7KZ85 1726 aaKnown RBP32.82■■■□□ 2.84
PKNOX1-202ENST00000418336 ATP10AO60312 1499 aa32.8■■■□□ 2.84
PKNOX1-202ENST00000418336 DIP2CQ9Y2E4 1556 aa32.8■■■□□ 2.84
PKNOX1-202ENST00000418336 KIAA1107Q9UPP5 1409 aa32.79■■■□□ 2.84
PKNOX1-202ENST00000418336 ABCA6Q8N139 1617 aa32.78■■■□□ 2.84
PKNOX1-202ENST00000418336 CFDP1Q9UEE9 299 aaPredicted RBP32.78■■■□□ 2.84
PKNOX1-202ENST00000418336 KANK4Q5T7N3 995 aaPredicted RBP32.77■■■□□ 2.84
PKNOX1-202ENST00000418336 KIDINS220Q9ULH0 1771 aa32.77■■■□□ 2.84
PKNOX1-202ENST00000418336 C9orf84Q5VXU9 1444 aa32.75■■■□□ 2.83
PKNOX1-202ENST00000418336 ZNF777Q9ULD5 760 aaPredicted RBP32.74■■■□□ 2.83
PKNOX1-202ENST00000418336 REREQ9P2R6 1566 aa32.74■■■□□ 2.83
PKNOX1-202ENST00000418336 MADDQ8WXG6 1647 aa32.73■■■□□ 2.83
PKNOX1-202ENST00000418336 ZNF644Q9H582 1327 aaPredicted RBP32.73■■■□□ 2.83
PKNOX1-202ENST00000418336 PLEKHH2Q8IVE3 1493 aa32.73■■■□□ 2.83
PKNOX1-202ENST00000418336 MBD5Q9P267 1494 aa32.73■■■□□ 2.83
PKNOX1-202ENST00000418336 HNRNPMP52272 730 aaKnown RBP eCLIP32.71■■■□□ 2.832e-7■□□□□ 11.3
PKNOX1-202ENST00000418336 PTPRMP28827 1452 aa32.68■■■□□ 2.82
PKNOX1-202ENST00000418336 ARID4BQ4LE39 1312 aaPredicted RBP32.68■■■□□ 2.82
PKNOX1-202ENST00000418336 INO80Q9ULG1 1556 aaPredicted RBP32.66■■■□□ 2.82
PKNOX1-202ENST00000418336 CAMSAP2Q08AD1 1489 aa32.61■■■□□ 2.81
PKNOX1-202ENST00000418336 AGLP35573 1532 aa32.61■■■□□ 2.81
PKNOX1-202ENST00000418336 RIMS1Q86UR5 1692 aaKnown RBP32.6■■■□□ 2.81
PKNOX1-202ENST00000418336 ATP7AQ04656 1500 aa32.6■■■□□ 2.81
PKNOX1-202ENST00000418336 SPAG9O60271 1321 aaKnown RBP32.56■■■□□ 2.8
PKNOX1-202ENST00000418336 FER1L4A9Z1Z3 1794 aa32.54■■■□□ 2.8
PKNOX1-202ENST00000418336 PLXNC1O60486 1568 aa32.53■■■□□ 2.8
PKNOX1-202ENST00000418336 MYOM3Q5VTT5 1437 aa32.52■■■□□ 2.8
PKNOX1-202ENST00000418336 ARHGEF5Q12774 1597 aa32.51■■■□□ 2.79
PKNOX1-202ENST00000418336 CCDC141Q6ZP82 1450 aa32.49■■■□□ 2.79
PKNOX1-202ENST00000418336 MLECQ14165 292 aa32.49■■■□□ 2.79
PKNOX1-202ENST00000418336 MYT1LQ9UL68 1186 aa32.49■■■□□ 2.79
PKNOX1-202ENST00000418336 RTEL1-TNFRSF6BF6WH68 1400 aa32.49■■■□□ 2.79
PKNOX1-202ENST00000418336 MIA2Q96PC5 1412 aa32.49■■■□□ 2.79
PKNOX1-202ENST00000418336 A2MP01023 1474 aa32.43■■■□□ 2.78
PKNOX1-202ENST00000418336 ADGBQ8N7X0 1667 aa32.43■■■□□ 2.78
PKNOX1-202ENST00000418336 RSPH4AQ5TD94 716 aa32.39■■■□□ 2.78
PKNOX1-202ENST00000418336 APLP2Q06481 763 aa32.38■■■□□ 2.77
PKNOX1-202ENST00000418336 MAST1Q9Y2H9 1570 aa32.36■■■□□ 2.77
PKNOX1-202ENST00000418336 TCOF1Q13428 1488 aaKnown RBP32.34■■■□□ 2.77
PKNOX1-202ENST00000418336 LMTK3Q96Q04 1460 aa32.34■■■□□ 2.77
PKNOX1-202ENST00000418336 PTPN23Q9H3S7 1636 aa32.33■■■□□ 2.77
PKNOX1-202ENST00000418336 FGD6Q6ZV73 1430 aa32.32■■■□□ 2.76
PKNOX1-202ENST00000418336 DHX29Q7Z478 1369 aaKnown RBP32.32■■■□□ 2.76
PKNOX1-202ENST00000418336 C3P01024 1663 aa32.28■■■□□ 2.76
PKNOX1-202ENST00000418336 CEBPAP49715 358 aaPredicted RBP32.27■■■□□ 2.76
PKNOX1-202ENST00000418336 ABCC5O15440 1437 aa32.25■■■□□ 2.75
PKNOX1-202ENST00000418336 CROCC2H7BZ55 1655 aa32.24■■■□□ 2.75
PKNOX1-202ENST00000418336 MROH2AA6NES4 1674 aa32.23■■■□□ 2.75
PKNOX1-202ENST00000418336 CNTLNQ9NXG0 1405 aa32.23■■■□□ 2.75
PKNOX1-202ENST00000418336 DNMT1P26358 1616 aaKnown RBP32.21■■■□□ 2.75
PKNOX1-202ENST00000418336 TSPY4P0CV99 314 aa32.2■■■□□ 2.75
PKNOX1-202ENST00000418336 TSPY10P0CW01 314 aa32.2■■■□□ 2.75
PKNOX1-202ENST00000418336 SHANK2Q9UPX8 1470 aa32.2■■■□□ 2.75
PKNOX1-202ENST00000418336 PLPPR3Q6T4P5 718 aa32.18■■■□□ 2.74
PKNOX1-202ENST00000418336 CLTCQ00610 1675 aaKnown RBP32.18■■■□□ 2.74
PKNOX1-202ENST00000418336 DAPK1P53355 1430 aa32.17■■■□□ 2.74
PKNOX1-202ENST00000418336 PREX1Q8TCU6 1659 aa32.16■■■□□ 2.74
PKNOX1-202ENST00000418336 ZMYM3Q14202 1370 aa32.12■■■□□ 2.73
PKNOX1-202ENST00000418336 GGT6Q6P531 493 aa32.12■■■□□ 2.73
PKNOX1-202ENST00000418336 PPP6R1Q9UPN7 881 aa32.1■■■□□ 2.73
PKNOX1-202ENST00000418336 RNF17Q9BXT8 1623 aaKnown RBP32.1■■■□□ 2.73
PKNOX1-202ENST00000418336 SETD1BQ9UPS6 1966 aaKnown RBP32.09■■■□□ 2.73
PKNOX1-202ENST00000418336 EIF2AK4Q9P2K8 1649 aaKnown RBP32.09■■■□□ 2.73
PKNOX1-202ENST00000418336 MROH1Q8NDA8 1641 aa32.08■■■□□ 2.73
PKNOX1-202ENST00000418336 KIF3BO15066 747 aa32.08■■■□□ 2.73
PKNOX1-202ENST00000418336 FAM135AQ9P2D6 1515 aa32.07■■■□□ 2.72
PKNOX1-202ENST00000418336 DUOX2Q9NRD8 1548 aa32.06■■■□□ 2.72
PKNOX1-202ENST00000418336 NPATQ14207 1427 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms