RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 POGZQ7Z3K3 1410 aa24.45■■□□□ 1.51
NUP50-204ENST00000417702 ARID4BQ4LE39 1312 aaPredicted RBP24.44■■□□□ 1.5
NUP50-204ENST00000417702 ZMYM4Q5VZL5 1548 aa24.43■■□□□ 1.5
NUP50-204ENST00000417702 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
NUP50-204ENST00000417702 MAGI2Q86UL8 1455 aa24.42■■□□□ 1.5
NUP50-204ENST00000417702 ARHGEF40Q8TER5 1519 aa24.41■■□□□ 1.5
NUP50-204ENST00000417702 ZFYVE16Q7Z3T8 1539 aa24.4■■□□□ 1.5
NUP50-204ENST00000417702 PREX2Q70Z35 1606 aa24.38■■□□□ 1.49
NUP50-204ENST00000417702 CDC42BPBQ9Y5S2 1711 aa24.38■■□□□ 1.49
NUP50-204ENST00000417702 ZNF518AQ6AHZ1 1483 aa24.37■■□□□ 1.49
NUP50-204ENST00000417702 YEATS2Q9ULM3 1422 aa24.36■■□□□ 1.49
NUP50-204ENST00000417702 AFAP1Q8N556 730 aa24.35■■□□□ 1.49
NUP50-204ENST00000417702 MYT1LQ9UL68 1186 aa24.34■■□□□ 1.49
NUP50-204ENST00000417702 ZNF777Q9ULD5 760 aaPredicted RBP24.34■■□□□ 1.49
NUP50-204ENST00000417702 CCNB3Q8WWL7 1395 aa24.33■■□□□ 1.49
NUP50-204ENST00000417702 GPATCH8Q9UKJ3 1502 aaKnown RBP24.32■■□□□ 1.48
NUP50-204ENST00000417702 VPS8Q8N3P4 1428 aa24.32■■□□□ 1.48
NUP50-204ENST00000417702 CDC42BPAQ5VT25 1732 aa24.32■■□□□ 1.48
NUP50-204ENST00000417702 CFDP1Q9UEE9 299 aaPredicted RBP24.31■■□□□ 1.48
NUP50-204ENST00000417702 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
NUP50-204ENST00000417702 ABCC1P33527 1531 aa24.3■■□□□ 1.48
NUP50-204ENST00000417702 ATP10AO60312 1499 aa24.29■■□□□ 1.48
NUP50-204ENST00000417702 ADAMTSL3P82987 1691 aa24.28■■□□□ 1.48
NUP50-204ENST00000417702 BCORL1Q5H9F3 1711 aa24.28■■□□□ 1.48
NUP50-204ENST00000417702 KDM5CP41229 1560 aa24.28■■□□□ 1.48
NUP50-204ENST00000417702 ARHGEF12Q9NZN5 1544 aa24.27■■□□□ 1.48
NUP50-204ENST00000417702 TRAPPC8Q9Y2L5 1435 aa24.27■■□□□ 1.48
NUP50-204ENST00000417702 C9orf84Q5VXU9 1444 aa24.26■■□□□ 1.47
NUP50-204ENST00000417702 MLECQ14165 292 aa24.23■■□□□ 1.47
NUP50-204ENST00000417702 PTPRMP28827 1452 aa24.23■■□□□ 1.47
NUP50-204ENST00000417702 MLH3Q9UHC1 1453 aa24.23■■□□□ 1.47
NUP50-204ENST00000417702 HECW2Q9P2P5 1572 aa24.23■■□□□ 1.47
NUP50-204ENST00000417702 ITSN2Q9NZM3 1697 aa24.23■■□□□ 1.47
NUP50-204ENST00000417702 PLEKHH2Q8IVE3 1493 aa24.22■■□□□ 1.47
NUP50-204ENST00000417702 TIAM1Q13009 1591 aa24.21■■□□□ 1.47
NUP50-204ENST00000417702 SAMD9LQ8IVG5 1584 aa24.21■■□□□ 1.47
NUP50-204ENST00000417702 HNRNPMP52272 730 aaKnown RBP eCLIP24.21■■□□□ 1.47
NUP50-204ENST00000417702 KIAA1107Q9UPP5 1409 aa24.2■■□□□ 1.46
NUP50-204ENST00000417702 MADDQ8WXG6 1647 aa24.2■■□□□ 1.46
NUP50-204ENST00000417702 SYCP2Q9BX26 1530 aa24.19■■□□□ 1.46
NUP50-204ENST00000417702 SPAG9O60271 1321 aaKnown RBP24.16■■□□□ 1.46
NUP50-204ENST00000417702 SIGLEC1Q9BZZ2 1709 aa24.16■■□□□ 1.46
NUP50-204ENST00000417702 NCOA2Q15596 1464 aa24.16■■□□□ 1.46
NUP50-204ENST00000417702 DIP2CQ9Y2E4 1556 aa24.16■■□□□ 1.46
NUP50-204ENST00000417702 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
NUP50-204ENST00000417702 LRRC9Q6ZRR7 1453 aa24.13■■□□□ 1.45
NUP50-204ENST00000417702 ZNF644Q9H582 1327 aaPredicted RBP24.13■■□□□ 1.45
NUP50-204ENST00000417702 APLP2Q06481 763 aa24.13■■□□□ 1.45
NUP50-204ENST00000417702 MAP3K1Q13233 1512 aa24.13■■□□□ 1.45
NUP50-204ENST00000417702 RIMS1Q86UR5 1692 aaKnown RBP24.12■■□□□ 1.45
NUP50-204ENST00000417702 ABCA6Q8N139 1617 aa24.12■■□□□ 1.45
NUP50-204ENST00000417702 REREQ9P2R6 1566 aa24.11■■□□□ 1.45
NUP50-204ENST00000417702 PLPPR3Q6T4P5 718 aa24.1■■□□□ 1.45
NUP50-204ENST00000417702 KIDINS220Q9ULH0 1771 aa24.1■■□□□ 1.45
NUP50-204ENST00000417702 KANK4Q5T7N3 995 aaPredicted RBP24.09■■□□□ 1.45
NUP50-204ENST00000417702 AGLP35573 1532 aa24.06■■□□□ 1.44
NUP50-204ENST00000417702 FER1L4A9Z1Z3 1794 aa24.06■■□□□ 1.44
NUP50-204ENST00000417702 MBD5Q9P267 1494 aa24.05■■□□□ 1.44
NUP50-204ENST00000417702 ATP7AQ04656 1500 aa24.05■■□□□ 1.44
NUP50-204ENST00000417702 RSPH4AQ5TD94 716 aa24.04■■□□□ 1.44
NUP50-204ENST00000417702 ESF1Q9H501 851 aaKnown RBP24.03■■□□□ 1.44
NUP50-204ENST00000417702 CAMSAP2Q08AD1 1489 aa24.01■■□□□ 1.43
NUP50-204ENST00000417702 INO80Q9ULG1 1556 aaPredicted RBP24■■□□□ 1.43
NUP50-204ENST00000417702 RTEL1-TNFRSF6BF6WH68 1400 aa23.98■■□□□ 1.43
NUP50-204ENST00000417702 A2MP01023 1474 aa23.98■■□□□ 1.43
NUP50-204ENST00000417702 CCDC141Q6ZP82 1450 aa23.98■■□□□ 1.43
NUP50-204ENST00000417702 CEBPAP49715 358 aaPredicted RBP23.96■■□□□ 1.43
NUP50-204ENST00000417702 MYOM3Q5VTT5 1437 aa23.95■■□□□ 1.42
NUP50-204ENST00000417702 TSPY4P0CV99 314 aa23.95■■□□□ 1.42
NUP50-204ENST00000417702 TSPY10P0CW01 314 aa23.95■■□□□ 1.42
NUP50-204ENST00000417702 MIA2Q96PC5 1412 aa23.93■■□□□ 1.42
NUP50-204ENST00000417702 LMTK3Q96Q04 1460 aa23.93■■□□□ 1.42
NUP50-204ENST00000417702 CNTLNQ9NXG0 1405 aa23.92■■□□□ 1.42
NUP50-204ENST00000417702 PLXNC1O60486 1568 aa23.91■■□□□ 1.42
NUP50-204ENST00000417702 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
NUP50-204ENST00000417702 ADGBQ8N7X0 1667 aa23.9■■□□□ 1.42
NUP50-204ENST00000417702 GGT6Q6P531 493 aa23.89■■□□□ 1.41
NUP50-204ENST00000417702 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
NUP50-204ENST00000417702 HSPA2P54652 639 aa23.86■■□□□ 1.41
NUP50-204ENST00000417702 PPP6R1Q9UPN7 881 aa23.85■■□□□ 1.41
NUP50-204ENST00000417702 SETD1BQ9UPS6 1966 aaKnown RBP23.84■■□□□ 1.41
NUP50-204ENST00000417702 KIF3BO15066 747 aa23.82■■□□□ 1.4
NUP50-204ENST00000417702 ZMYM3Q14202 1370 aa23.81■■□□□ 1.4
NUP50-204ENST00000417702 C3P01024 1663 aa23.81■■□□□ 1.4
NUP50-204ENST00000417702 UHRF1BP1Q6BDS2 1440 aa23.8■■□□□ 1.4
NUP50-204ENST00000417702 PREX1Q8TCU6 1659 aa23.79■■□□□ 1.4
NUP50-204ENST00000417702 FGD6Q6ZV73 1430 aa23.77■■□□□ 1.4
NUP50-204ENST00000417702 MAST1Q9Y2H9 1570 aa23.77■■□□□ 1.4
NUP50-204ENST00000417702 PTPN23Q9H3S7 1636 aa23.77■■□□□ 1.4
NUP50-204ENST00000417702 MROH2AA6NES4 1674 aa23.76■■□□□ 1.39
NUP50-204ENST00000417702 NPATQ14207 1427 aa23.75■■□□□ 1.39
NUP50-204ENST00000417702 CLTCQ00610 1675 aaKnown RBP23.74■■□□□ 1.39
NUP50-204ENST00000417702 ABCC5O15440 1437 aa23.72■■□□□ 1.39
NUP50-204ENST00000417702 TCOF1Q13428 1488 aaKnown RBP23.72■■□□□ 1.39
NUP50-204ENST00000417702 WASHC2CQ9Y4E1 1318 aa23.7■■□□□ 1.38
NUP50-204ENST00000417702 SHANK2Q9UPX8 1470 aa23.69■■□□□ 1.38
NUP50-204ENST00000417702 DAPK1P53355 1430 aa23.68■■□□□ 1.38
NUP50-204ENST00000417702 PTPRKQ15262 1439 aa23.67■■□□□ 1.38
NUP50-204ENST00000417702 FAM135AQ9P2D6 1515 aa23.67■■□□□ 1.38
NUP50-204ENST00000417702 FAM50AQ14320 339 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms