RNA–Protein interactions for RNA: ENST00000417348.2

SLC39A1-206, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-206ENST00000417348 CDC42BPAQ5VT25 1732 aa30.39■■■□□ 2.45
SLC39A1-206ENST00000417348 CDC42BPBQ9Y5S2 1711 aa30.39■■■□□ 2.45
SLC39A1-206ENST00000417348 GPATCH8Q9UKJ3 1502 aaKnown RBP30.38■■■□□ 2.45
SLC39A1-206ENST00000417348 ARHGAP5Q13017 1502 aa30.37■■■□□ 2.45
SLC39A1-206ENST00000417348 CCNB3Q8WWL7 1395 aa30.35■■■□□ 2.45
SLC39A1-206ENST00000417348 DENND4BO75064 1496 aaPredicted RBP30.35■■■□□ 2.45
SLC39A1-206ENST00000417348 ITSN2Q9NZM3 1697 aa30.34■■■□□ 2.45
SLC39A1-206ENST00000417348 ADGRL1O94910 1474 aa30.33■■■□□ 2.45
SLC39A1-206ENST00000417348 NCOA2Q15596 1464 aa30.32■■■□□ 2.44
SLC39A1-206ENST00000417348 PLEKHH2Q8IVE3 1493 aa30.3■■■□□ 2.44
SLC39A1-206ENST00000417348 RICTORQ6R327 1708 aa30.29■■■□□ 2.44
SLC39A1-206ENST00000417348 ZMYM4Q5VZL5 1548 aa30.28■■■□□ 2.44
SLC39A1-206ENST00000417348 MAGI2Q86UL8 1455 aa30.28■■■□□ 2.44
SLC39A1-206ENST00000417348 KIAA1107Q9UPP5 1409 aa30.27■■■□□ 2.44
SLC39A1-206ENST00000417348 FRMPD1Q5SYB0 1578 aa30.26■■■□□ 2.43
SLC39A1-206ENST00000417348 POGZQ7Z3K3 1410 aa30.26■■■□□ 2.43
SLC39A1-206ENST00000417348 SCAPERQ9BY12 1400 aa30.26■■■□□ 2.43
SLC39A1-206ENST00000417348 ABCC1P33527 1531 aa30.25■■■□□ 2.43
SLC39A1-206ENST00000417348 ZNF518AQ6AHZ1 1483 aa30.25■■■□□ 2.43
SLC39A1-206ENST00000417348 CFDP1Q9UEE9 299 aaPredicted RBP30.24■■■□□ 2.43
SLC39A1-206ENST00000417348 KANK4Q5T7N3 995 aaPredicted RBP30.23■■■□□ 2.43
SLC39A1-206ENST00000417348 MIA2Q96PC5 1412 aa30.2■■■□□ 2.42
SLC39A1-206ENST00000417348 KDM5CP41229 1560 aa30.2■■■□□ 2.42
SLC39A1-206ENST00000417348 RAPGEF3O95398 923 aa30.19■■■□□ 2.42
SLC39A1-206ENST00000417348 SAMD9LQ8IVG5 1584 aa30.18■■■□□ 2.42
SLC39A1-206ENST00000417348 MYOM3Q5VTT5 1437 aa30.13■■■□□ 2.41
SLC39A1-206ENST00000417348 RSPH4AQ5TD94 716 aa30.13■■■□□ 2.41
SLC39A1-206ENST00000417348 MLH3Q9UHC1 1453 aa30.12■■■□□ 2.41
SLC39A1-206ENST00000417348 ARHGEF12Q9NZN5 1544 aa30.11■■■□□ 2.41
SLC39A1-206ENST00000417348 ARHGEF40Q8TER5 1519 aa30.1■■■□□ 2.41
SLC39A1-206ENST00000417348 ZFYVE16Q7Z3T8 1539 aa30.06■■■□□ 2.4
SLC39A1-206ENST00000417348 SYCP2Q9BX26 1530 aa30.06■■■□□ 2.4
SLC39A1-206ENST00000417348 MBD5Q9P267 1494 aa30.06■■■□□ 2.4
SLC39A1-206ENST00000417348 HECW2Q9P2P5 1572 aa30.06■■■□□ 2.4
SLC39A1-206ENST00000417348 TRAPPC8Q9Y2L5 1435 aa30.05■■■□□ 2.4
SLC39A1-206ENST00000417348 ZNF777Q9ULD5 760 aaPredicted RBP30.04■■■□□ 2.4
SLC39A1-206ENST00000417348 CAMSAP2Q08AD1 1489 aa30.04■■■□□ 2.4
SLC39A1-206ENST00000417348 ARHGEF5Q12774 1597 aa30.03■■■□□ 2.4
SLC39A1-206ENST00000417348 AFAP1Q8N556 730 aa30.02■■■□□ 2.4
SLC39A1-206ENST00000417348 REREQ9P2R6 1566 aa30■■■□□ 2.39
SLC39A1-206ENST00000417348 RTEL1-TNFRSF6BF6WH68 1400 aa29.98■■■□□ 2.39
SLC39A1-206ENST00000417348 ATP10AO60312 1499 aa29.97■■■□□ 2.39
SLC39A1-206ENST00000417348 FGD6Q6ZV73 1430 aa29.96■■■□□ 2.39
SLC39A1-206ENST00000417348 TCOF1Q13428 1488 aaKnown RBP29.96■■■□□ 2.39
SLC39A1-206ENST00000417348 CCDC141Q6ZP82 1450 aa29.96■■■□□ 2.39
SLC39A1-206ENST00000417348 HNRNPMP52272 730 aaKnown RBP eCLIP29.96■■■□□ 2.39
SLC39A1-206ENST00000417348 YEATS2Q9ULM3 1422 aa29.95■■■□□ 2.38
SLC39A1-206ENST00000417348 ZNF644Q9H582 1327 aaPredicted RBP29.95■■■□□ 2.38
SLC39A1-206ENST00000417348 C9orf84Q5VXU9 1444 aa29.94■■■□□ 2.38
SLC39A1-206ENST00000417348 KIDINS220Q9ULH0 1771 aa29.93■■■□□ 2.38
SLC39A1-206ENST00000417348 INO80Q9ULG1 1556 aaPredicted RBP29.93■■■□□ 2.38
SLC39A1-206ENST00000417348 SPAG9O60271 1321 aaKnown RBP29.93■■■□□ 2.38
SLC39A1-206ENST00000417348 ATP7AQ04656 1500 aa29.91■■■□□ 2.38
SLC39A1-206ENST00000417348 DIP2CQ9Y2E4 1556 aa29.9■■■□□ 2.38
SLC39A1-206ENST00000417348 PTPN23Q9H3S7 1636 aa29.9■■■□□ 2.38
SLC39A1-206ENST00000417348 AGLP35573 1532 aa29.86■■■□□ 2.37
SLC39A1-206ENST00000417348 MAST1Q9Y2H9 1570 aa29.86■■■□□ 2.37
SLC39A1-206ENST00000417348 ABCA6Q8N139 1617 aa29.85■■■□□ 2.37
SLC39A1-206ENST00000417348 TSPY4P0CV99 314 aa29.84■■■□□ 2.37
SLC39A1-206ENST00000417348 TSPY10P0CW01 314 aa29.84■■■□□ 2.37
SLC39A1-206ENST00000417348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.84■■■□□ 2.37
SLC39A1-206ENST00000417348 SHANK2Q9UPX8 1470 aa29.84■■■□□ 2.37
SLC39A1-206ENST00000417348 ADGBQ8N7X0 1667 aa29.8■■■□□ 2.36
SLC39A1-206ENST00000417348 MYT1LQ9UL68 1186 aa29.79■■■□□ 2.36
SLC39A1-206ENST00000417348 BCORL1Q5H9F3 1711 aa29.79■■■□□ 2.36
SLC39A1-206ENST00000417348 DNMT1P26358 1616 aaKnown RBP29.78■■■□□ 2.36
SLC39A1-206ENST00000417348 PLXNC1O60486 1568 aa29.77■■■□□ 2.36
SLC39A1-206ENST00000417348 ADAMTSL3P82987 1691 aa29.76■■■□□ 2.36
SLC39A1-206ENST00000417348 KDM4FA0A1W2PPD8 638 aa29.76■■■□□ 2.35
SLC39A1-206ENST00000417348 A2MP01023 1474 aa29.74■■■□□ 2.35
SLC39A1-206ENST00000417348 ABCC5O15440 1437 aa29.74■■■□□ 2.35
SLC39A1-206ENST00000417348 CROCC2H7BZ55 1655 aa29.74■■■□□ 2.35
SLC39A1-206ENST00000417348 DAPK1P53355 1430 aa29.73■■■□□ 2.35
SLC39A1-206ENST00000417348 SIGLEC1Q9BZZ2 1709 aa29.72■■■□□ 2.35
SLC39A1-206ENST00000417348 ARID4BQ4LE39 1312 aaPredicted RBP29.71■■■□□ 2.35
SLC39A1-206ENST00000417348 DHX29Q7Z478 1369 aaKnown RBP29.71■■■□□ 2.35
SLC39A1-206ENST00000417348 RRBP1Q9P2E9 1410 aaKnown RBP29.7■■■□□ 2.34
SLC39A1-206ENST00000417348 PPP6R1Q9UPN7 881 aa29.66■■■□□ 2.34
SLC39A1-206ENST00000417348 ADGRL2O95490 1459 aa29.64■■■□□ 2.34
SLC39A1-206ENST00000417348 FAM135AQ9P2D6 1515 aa29.63■■■□□ 2.33
SLC39A1-206ENST00000417348 DUOX2Q9NRD8 1548 aa29.61■■■□□ 2.33
SLC39A1-206ENST00000417348 ANKRD30AQ9BXX3 1397 aa29.6■■■□□ 2.33
SLC39A1-206ENST00000417348 EIF2AK4Q9P2K8 1649 aaKnown RBP29.6■■■□□ 2.33
SLC39A1-206ENST00000417348 FAM50AQ14320 339 aaKnown RBP29.59■■■□□ 2.33
SLC39A1-206ENST00000417348 MADDQ8WXG6 1647 aa29.58■■■□□ 2.33
SLC39A1-206ENST00000417348 CNTLNQ9NXG0 1405 aa29.58■■■□□ 2.33
SLC39A1-206ENST00000417348 NCOA1Q15788 1441 aa29.57■■■□□ 2.32
SLC39A1-206ENST00000417348 ERBINQ96RT1 1412 aa29.56■■■□□ 2.32
SLC39A1-206ENST00000417348 ROCK1Q13464 1354 aa29.56■■■□□ 2.32
SLC39A1-206ENST00000417348 FER1L4A9Z1Z3 1794 aa29.54■■■□□ 2.32
SLC39A1-206ENST00000417348 AEBP2Q6ZN18 517 aaPredicted RBP29.54■■■□□ 2.32
SLC39A1-206ENST00000417348 PTPRMP28827 1452 aa29.54■■■□□ 2.32
SLC39A1-206ENST00000417348 KIF15Q9NS87 1388 aa29.53■■■□□ 2.32
SLC39A1-206ENST00000417348 PPARGC1BQ86YN6 1023 aaKnown RBP29.52■■■□□ 2.32
SLC39A1-206ENST00000417348 RNF17Q9BXT8 1623 aaKnown RBP29.49■■■□□ 2.31
SLC39A1-206ENST00000417348 MROH2AA6NES4 1674 aa29.48■■■□□ 2.31
SLC39A1-206ENST00000417348 RIMS1Q86UR5 1692 aaKnown RBP29.47■■■□□ 2.31
SLC39A1-206ENST00000417348 MLECQ14165 292 aa29.45■■■□□ 2.31
SLC39A1-206ENST00000417348 KIF3BO15066 747 aa29.44■■■□□ 2.3
SLC39A1-206ENST00000417348 ESF1Q9H501 851 aaKnown RBP29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms