RNA–Protein interactions for RNA: ENST00000417345.2

CNTFR-203, Transcript of ciliary neurotrophic factor receptor, humanhuman

TSL 3

Gene CNTFR, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-203ENST00000417345 PLCH2O75038 1416 aa21.5■■□□□ 1.03
CNTFR-203ENST00000417345 PHLDB1Q86UU1 1377 aa21.49■■□□□ 1.03
CNTFR-203ENST00000417345 NCOA2Q15596 1464 aa21.48■■□□□ 1.03
CNTFR-203ENST00000417345 CDC42BPBQ9Y5S2 1711 aa21.46■■□□□ 1.03
CNTFR-203ENST00000417345 EFCAB2Q5VUJ9 269 aa21.46■■□□□ 1.03
CNTFR-203ENST00000417345 KANK4Q5T7N3 995 aaPredicted RBP21.44■■□□□ 1.02
CNTFR-203ENST00000417345 AKNAQ7Z591 1439 aa21.42■■□□□ 1.02
CNTFR-203ENST00000417345 GPATCH8Q9UKJ3 1502 aaKnown RBP21.42■■□□□ 1.02
CNTFR-203ENST00000417345 ADGRL1O94910 1474 aa21.4■■□□□ 1.02
CNTFR-203ENST00000417345 CFDP1Q9UEE9 299 aaPredicted RBP21.4■■□□□ 1.02
CNTFR-203ENST00000417345 ZNF777Q9ULD5 760 aaPredicted RBP21.37■■□□□ 1.01
CNTFR-203ENST00000417345 PLEKHH2Q8IVE3 1493 aa21.37■■□□□ 1.01
CNTFR-203ENST00000417345 DENND4BO75064 1496 aaPredicted RBP21.36■■□□□ 1.01
CNTFR-203ENST00000417345 MYOM3Q5VTT5 1437 aa21.35■■□□□ 1.01
CNTFR-203ENST00000417345 ABCC1P33527 1531 aa21.34■■□□□ 1.01
CNTFR-203ENST00000417345 ILDR1Q86SU0 546 aaPredicted RBP21.34■■□□□ 1.01
CNTFR-203ENST00000417345 SAMD9LQ8IVG5 1584 aa21.33■■□□□ 1.01
CNTFR-203ENST00000417345 SCAPERQ9BY12 1400 aa21.33■■□□□ 1.01
CNTFR-203ENST00000417345 RICTORQ6R327 1708 aa21.32■■□□□ 1
CNTFR-203ENST00000417345 MIA2Q96PC5 1412 aa21.3■■□□□ 1
CNTFR-203ENST00000417345 ZNF518AQ6AHZ1 1483 aa21.3■■□□□ 1
CNTFR-203ENST00000417345 POGZQ7Z3K3 1410 aa21.29■■□□□ 1
CNTFR-203ENST00000417345 SYCP2Q9BX26 1530 aa21.29■■□□□ 1
CNTFR-203ENST00000417345 CAMSAP2Q08AD1 1489 aa21.28■■□□□ 1
CNTFR-203ENST00000417345 COL17A1Q9UMD9 1497 aaPredicted RBP21.28■■□□□ 1
CNTFR-203ENST00000417345 FRMPD1Q5SYB0 1578 aa21.27■□□□□ 0.99
CNTFR-203ENST00000417345 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
CNTFR-203ENST00000417345 KIAA1107Q9UPP5 1409 aa21.26■□□□□ 0.99
CNTFR-203ENST00000417345 PPARGC1BQ86YN6 1023 aaKnown RBP21.25■□□□□ 0.99
CNTFR-203ENST00000417345 PTPN23Q9H3S7 1636 aa21.25■□□□□ 0.99
CNTFR-203ENST00000417345 ZMYM4Q5VZL5 1548 aa21.24■□□□□ 0.99
CNTFR-203ENST00000417345 FGD6Q6ZV73 1430 aa21.24■□□□□ 0.99
CNTFR-203ENST00000417345 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
CNTFR-203ENST00000417345 KDM4FA0A1W2PPD8 638 aa21.23■□□□□ 0.99
CNTFR-203ENST00000417345 HECW2Q9P2P5 1572 aa21.22■□□□□ 0.99
CNTFR-203ENST00000417345 MAGI2Q86UL8 1455 aa21.21■□□□□ 0.99
CNTFR-203ENST00000417345 KDM5CP41229 1560 aa21.21■□□□□ 0.99
CNTFR-203ENST00000417345 ZNF644Q9H582 1327 aaPredicted RBP21.2■□□□□ 0.98
CNTFR-203ENST00000417345 ZFYVE16Q7Z3T8 1539 aa21.19■□□□□ 0.98
CNTFR-203ENST00000417345 ARHGEF12Q9NZN5 1544 aa21.19■□□□□ 0.98
CNTFR-203ENST00000417345 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.98
CNTFR-203ENST00000417345 CCDC141Q6ZP82 1450 aa21.19■□□□□ 0.98
CNTFR-203ENST00000417345 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
CNTFR-203ENST00000417345 RSPH4AQ5TD94 716 aa21.18■□□□□ 0.98
CNTFR-203ENST00000417345 TRAPPC8Q9Y2L5 1435 aa21.18■□□□□ 0.98
CNTFR-203ENST00000417345 ARHGEF40Q8TER5 1519 aa21.18■□□□□ 0.98
CNTFR-203ENST00000417345 TCOF1Q13428 1488 aaKnown RBP21.16■□□□□ 0.98
CNTFR-203ENST00000417345 AFAP1Q8N556 730 aa21.16■□□□□ 0.98
CNTFR-203ENST00000417345 SPAG9O60271 1321 aaKnown RBP21.15■□□□□ 0.98
CNTFR-203ENST00000417345 FAM50AQ14320 339 aaKnown RBP21.14■□□□□ 0.97
CNTFR-203ENST00000417345 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
CNTFR-203ENST00000417345 MLH3Q9UHC1 1453 aa21.13■□□□□ 0.97
CNTFR-203ENST00000417345 ATP7AQ04656 1500 aa21.13■□□□□ 0.97
CNTFR-203ENST00000417345 TSPY4P0CV99 314 aa21.12■□□□□ 0.97
CNTFR-203ENST00000417345 TSPY10P0CW01 314 aa21.12■□□□□ 0.97
CNTFR-203ENST00000417345 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
CNTFR-203ENST00000417345 INO80Q9ULG1 1556 aaPredicted RBP21.11■□□□□ 0.97
CNTFR-203ENST00000417345 CROCC2H7BZ55 1655 aa21.11■□□□□ 0.97
CNTFR-203ENST00000417345 KIDINS220Q9ULH0 1771 aa21.1■□□□□ 0.97
CNTFR-203ENST00000417345 ABCA6Q8N139 1617 aa21.07■□□□□ 0.96
CNTFR-203ENST00000417345 DIP2CQ9Y2E4 1556 aa21.07■□□□□ 0.96
CNTFR-203ENST00000417345 RTEL1-TNFRSF6BF6WH68 1400 aa21.07■□□□□ 0.96
CNTFR-203ENST00000417345 YEATS2Q9ULM3 1422 aa21.07■□□□□ 0.96
CNTFR-203ENST00000417345 ADGBQ8N7X0 1667 aa21.07■□□□□ 0.96
CNTFR-203ENST00000417345 ATP10AO60312 1499 aa21.07■□□□□ 0.96
CNTFR-203ENST00000417345 SHANK2Q9UPX8 1470 aa21.07■□□□□ 0.96
CNTFR-203ENST00000417345 MAST1Q9Y2H9 1570 aa21.06■□□□□ 0.96
CNTFR-203ENST00000417345 C9orf84Q5VXU9 1444 aa21.06■□□□□ 0.96
CNTFR-203ENST00000417345 DAPK1P53355 1430 aa21.05■□□□□ 0.96
CNTFR-203ENST00000417345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.04■□□□□ 0.96
CNTFR-203ENST00000417345 RRBP1Q9P2E9 1410 aaKnown RBP21.04■□□□□ 0.96
CNTFR-203ENST00000417345 ARID4BQ4LE39 1312 aaPredicted RBP21.04■□□□□ 0.96
CNTFR-203ENST00000417345 ABCC5O15440 1437 aa21.02■□□□□ 0.96
CNTFR-203ENST00000417345 REREQ9P2R6 1566 aa21.02■□□□□ 0.95
CNTFR-203ENST00000417345 PLXNC1O60486 1568 aa21.01■□□□□ 0.95
CNTFR-203ENST00000417345 A2MP01023 1474 aa20.98■□□□□ 0.95
CNTFR-203ENST00000417345 ANKRD30AQ9BXX3 1397 aa20.97■□□□□ 0.95
CNTFR-203ENST00000417345 ITGAEP38570 1179 aa20.95■□□□□ 0.94
CNTFR-203ENST00000417345 AGLP35573 1532 aa20.94■□□□□ 0.94
CNTFR-203ENST00000417345 DUOX2Q9NRD8 1548 aa20.93■□□□□ 0.94
CNTFR-203ENST00000417345 CHIC2Q9UKJ5 165 aa20.92■□□□□ 0.94
CNTFR-203ENST00000417345 KIF15Q9NS87 1388 aa20.92■□□□□ 0.94
CNTFR-203ENST00000417345 BCORL1Q5H9F3 1711 aa20.92■□□□□ 0.94
CNTFR-203ENST00000417345 ADGRL2O95490 1459 aa20.91■□□□□ 0.94
CNTFR-203ENST00000417345 DHX29Q7Z478 1369 aaKnown RBP20.9■□□□□ 0.94
CNTFR-203ENST00000417345 SIGLEC1Q9BZZ2 1709 aa20.9■□□□□ 0.94
CNTFR-203ENST00000417345 EIF2AK4Q9P2K8 1649 aaKnown RBP20.89■□□□□ 0.94
CNTFR-203ENST00000417345 RRP7BPQ9NSQ0 103 aa20.88■□□□□ 0.93
CNTFR-203ENST00000417345 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
CNTFR-203ENST00000417345 ERBINQ96RT1 1412 aa20.87■□□□□ 0.93
CNTFR-203ENST00000417345 ROCK1Q13464 1354 aa20.86■□□□□ 0.93
CNTFR-203ENST00000417345 MLECQ14165 292 aa20.86■□□□□ 0.93
CNTFR-203ENST00000417345 FER1L4A9Z1Z3 1794 aa20.86■□□□□ 0.93
CNTFR-203ENST00000417345 ESF1Q9H501 851 aaKnown RBP20.85■□□□□ 0.93
CNTFR-203ENST00000417345 ADAMTSL3P82987 1691 aa20.83■□□□□ 0.93
CNTFR-203ENST00000417345 PTPRKQ15262 1439 aa20.83■□□□□ 0.93
CNTFR-203ENST00000417345 KIF3BO15066 747 aa20.82■□□□□ 0.92
CNTFR-203ENST00000417345 MADDQ8WXG6 1647 aa20.82■□□□□ 0.92
CNTFR-203ENST00000417345 RIMS1Q86UR5 1692 aaKnown RBP20.8■□□□□ 0.92
CNTFR-203ENST00000417345 RNF17Q9BXT8 1623 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms