RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 ZFYVE16Q7Z3T8 1539 aa35.57■■■■□ 3.29
ACTB-203ENST00000417101 MYO5CQ9NQX4 1742 aa35.57■■■■□ 3.28
ACTB-203ENST00000417101 MADDQ8WXG6 1647 aa35.57■■■■□ 3.28
ACTB-203ENST00000417101 MAGI2Q86UL8 1455 aa35.56■■■■□ 3.28
ACTB-203ENST00000417101 LRRIQ1Q96JM4 1722 aa35.56■■■■□ 3.28
ACTB-203ENST00000417101 CASKIN1Q8WXD9 1431 aa35.54■■■■□ 3.28
ACTB-203ENST00000417101 PCF11O94913 1555 aaKnown RBP35.52■■■■□ 3.28
ACTB-203ENST00000417101 ARHGAP5Q13017 1502 aa35.48■■■■□ 3.27
ACTB-203ENST00000417101 CCDC18Q5T9S5 1454 aa35.48■■■■□ 3.27
ACTB-203ENST00000417101 SIGLEC1Q9BZZ2 1709 aa35.43■■■■□ 3.26
ACTB-203ENST00000417101 RIMS1Q86UR5 1692 aaKnown RBP35.43■■■■□ 3.26
ACTB-203ENST00000417101 ILDR1Q86SU0 546 aaPredicted RBP35.42■■■■□ 3.26
ACTB-203ENST00000417101 MLECQ14165 292 aa35.41■■■■□ 3.26
ACTB-203ENST00000417101 ZNF518AQ6AHZ1 1483 aa35.39■■■■□ 3.26
ACTB-203ENST00000417101 FYCO1Q9BQS8 1478 aa35.39■■■■□ 3.26
ACTB-203ENST00000417101 ATP10AO60312 1499 aa35.38■■■■□ 3.25
ACTB-203ENST00000417101 AFAP1Q8N556 730 aa35.38■■■■□ 3.25
ACTB-203ENST00000417101 PLPPR3Q6T4P5 718 aa35.35■■■■□ 3.25
ACTB-203ENST00000417101 C9orf84Q5VXU9 1444 aa35.34■■■■□ 3.25
ACTB-203ENST00000417101 CDC42BPBQ9Y5S2 1711 aa35.33■■■■□ 3.25
ACTB-203ENST00000417101 MYT1LQ9UL68 1186 aa35.31■■■■□ 3.24
ACTB-203ENST00000417101 KDM5CP41229 1560 aa35.3■■■■□ 3.24
ACTB-203ENST00000417101 PREX2Q70Z35 1606 aa35.3■■■■□ 3.24
ACTB-203ENST00000417101 LMTK3Q96Q04 1460 aa35.29■■■■□ 3.24
ACTB-203ENST00000417101 ARHGEF12Q9NZN5 1544 aa35.23■■■■□ 3.23
ACTB-203ENST00000417101 FER1L4A9Z1Z3 1794 aa35.23■■■■□ 3.23
ACTB-203ENST00000417101 TRAPPC8Q9Y2L5 1435 aa35.23■■■■□ 3.23
ACTB-203ENST00000417101 ABCC1P33527 1531 aa35.22■■■■□ 3.23
ACTB-203ENST00000417101 CDC42BPAQ5VT25 1732 aa35.19■■■■□ 3.22
ACTB-203ENST00000417101 MLH3Q9UHC1 1453 aa35.19■■■■□ 3.22
ACTB-203ENST00000417101 DIP2CQ9Y2E4 1556 aa35.18■■■■□ 3.22
ACTB-203ENST00000417101 HSPA2P54652 639 aa35.16■■■■□ 3.22
ACTB-203ENST00000417101 ZNF777Q9ULD5 760 aaPredicted RBP35.16■■■■□ 3.22
ACTB-203ENST00000417101 ITSN2Q9NZM3 1697 aa35.14■■■■□ 3.22
ACTB-203ENST00000417101 ABCA6Q8N139 1617 aa35.14■■■■□ 3.22
ACTB-203ENST00000417101 GPATCH8Q9UKJ3 1502 aaKnown RBP35.12■■■■□ 3.21
ACTB-203ENST00000417101 REREQ9P2R6 1566 aa35.1■■■■□ 3.21
ACTB-203ENST00000417101 CEBPAP49715 358 aaPredicted RBP35.09■■■■□ 3.21
ACTB-203ENST00000417101 MTUS2Q5JR59 1369 aa35.09■■■■□ 3.21
ACTB-203ENST00000417101 SAMD9LQ8IVG5 1584 aa35.07■■■■□ 3.2
ACTB-203ENST00000417101 CEP162Q5TB80 1403 aa35.06■■■■□ 3.2
ACTB-203ENST00000417101 CCNB3Q8WWL7 1395 aa35.04■■■■□ 3.2
ACTB-203ENST00000417101 CFDP1Q9UEE9 299 aaPredicted RBP35.04■■■■□ 3.2
ACTB-203ENST00000417101 SYCP2Q9BX26 1530 aa35.03■■■■□ 3.2
ACTB-203ENST00000417101 HNRNPMP52272 730 aaKnown RBP eCLIP35.03■■■■□ 3.2
ACTB-203ENST00000417101 KIDINS220Q9ULH0 1771 aa35.02■■■■□ 3.2
ACTB-203ENST00000417101 AGLP35573 1532 aa35.01■■■■□ 3.19
ACTB-203ENST00000417101 SPAG9O60271 1321 aaKnown RBP34.99■■■■□ 3.19
ACTB-203ENST00000417101 KIAA1107Q9UPP5 1409 aa34.96■■■■□ 3.19
ACTB-203ENST00000417101 ESF1Q9H501 851 aaKnown RBP34.95■■■■□ 3.19
ACTB-203ENST00000417101 PLEKHH2Q8IVE3 1493 aa34.95■■■■□ 3.19
ACTB-203ENST00000417101 PREX1Q8TCU6 1659 aa34.92■■■■□ 3.18
ACTB-203ENST00000417101 FBXO41Q8TF61 875 aa34.92■■■■□ 3.18
ACTB-203ENST00000417101 EHBP1L1Q8N3D4 1523 aa34.91■■■■□ 3.18
ACTB-203ENST00000417101 TIAM1Q13009 1591 aa34.87■■■■□ 3.17
ACTB-203ENST00000417101 ATP7AQ04656 1500 aa34.86■■■■□ 3.17
ACTB-203ENST00000417101 ZNF644Q9H582 1327 aaPredicted RBP34.86■■■■□ 3.17
ACTB-203ENST00000417101 UHRF1BP1Q6BDS2 1440 aa34.86■■■■□ 3.17
ACTB-203ENST00000417101 C3P01024 1663 aa34.83■■■■□ 3.17
ACTB-203ENST00000417101 CNTLNQ9NXG0 1405 aa34.82■■■■□ 3.17
ACTB-203ENST00000417101 INO80Q9ULG1 1556 aaPredicted RBP34.82■■■■□ 3.16
ACTB-203ENST00000417101 SETD1BQ9UPS6 1966 aaKnown RBP34.82■■■■□ 3.16
ACTB-203ENST00000417101 LOC105371045A0A1W2PR82 267 aa34.81■■■■□ 3.16
ACTB-203ENST00000417101 SUPT6HQ7KZ85 1726 aaKnown RBP34.78■■■■□ 3.16
ACTB-203ENST00000417101 A2MP01023 1474 aa34.78■■■■□ 3.16
ACTB-203ENST00000417101 MBD5Q9P267 1494 aa34.75■■■■□ 3.15
ACTB-203ENST00000417101 PLXNC1O60486 1568 aa34.74■■■■□ 3.15
ACTB-203ENST00000417101 NCOA2Q15596 1464 aa34.73■■■■□ 3.15
ACTB-203ENST00000417101 ZMYM3Q14202 1370 aa34.69■■■■□ 3.14
ACTB-203ENST00000417101 GGT6Q6P531 493 aa34.68■■■■□ 3.14
ACTB-203ENST00000417101 VPS8Q8N3P4 1428 aa34.68■■■■□ 3.14
ACTB-203ENST00000417101 DMRT2Q9Y5R5 561 aa34.68■■■■□ 3.14
ACTB-203ENST00000417101 STRCQ7RTU9 1775 aa34.67■■■■□ 3.14
ACTB-203ENST00000417101 MROH2AA6NES4 1674 aa34.66■■■■□ 3.14
ACTB-203ENST00000417101 CERKQ8TCT0 537 aa34.66■■■■□ 3.14
ACTB-203ENST00000417101 RTEL1-TNFRSF6BF6WH68 1400 aa34.64■■■■□ 3.14
ACTB-203ENST00000417101 NPATQ14207 1427 aa34.64■■■■□ 3.14
ACTB-203ENST00000417101 ADGBQ8N7X0 1667 aa34.63■■■■□ 3.13
ACTB-203ENST00000417101 CAMSAP2Q08AD1 1489 aa34.62■■■■□ 3.13
ACTB-203ENST00000417101 CLTCQ00610 1675 aaKnown RBP34.6■■■■□ 3.13
ACTB-203ENST00000417101 CCDC141Q6ZP82 1450 aa34.59■■■■□ 3.13
ACTB-203ENST00000417101 LRRC9Q6ZRR7 1453 aa34.58■■■■□ 3.13
ACTB-203ENST00000417101 DHX29Q7Z478 1369 aaKnown RBP34.57■■■■□ 3.12
ACTB-203ENST00000417101 RSPH4AQ5TD94 716 aa34.56■■■■□ 3.12
ACTB-203ENST00000417101 PPP6R1Q9UPN7 881 aa34.56■■■■□ 3.12
ACTB-203ENST00000417101 PTPRTO14522 1441 aa34.53■■■■□ 3.12
ACTB-203ENST00000417101 PTPRKQ15262 1439 aa34.51■■■■□ 3.12
ACTB-203ENST00000417101 NCOA1Q15788 1441 aa34.51■■■■□ 3.12
ACTB-203ENST00000417101 KANK4Q5T7N3 995 aaPredicted RBP34.5■■■■□ 3.11
ACTB-203ENST00000417101 KIF3BO15066 747 aa34.49■■■■□ 3.11
ACTB-203ENST00000417101 ARHGEF5Q12774 1597 aa34.46■■■■□ 3.11
ACTB-203ENST00000417101 TSPY4P0CV99 314 aa34.46■■■■□ 3.11
ACTB-203ENST00000417101 TSPY10P0CW01 314 aa34.46■■■■□ 3.11
ACTB-203ENST00000417101 CAMSAP1Q5T5Y3 1602 aa34.45■■■■□ 3.11
ACTB-203ENST00000417101 MAP3K1Q13233 1512 aa34.45■■■■□ 3.1
ACTB-203ENST00000417101 MYO3AQ8NEV4 1616 aa34.42■■■■□ 3.1
ACTB-203ENST00000417101 NCKAP5LQ9HCH0 1330 aa34.38■■■■□ 3.09
ACTB-203ENST00000417101 CEP170BQ9Y4F5 1589 aaPredicted RBP34.37■■■■□ 3.09
ACTB-203ENST00000417101 ZNF142P52746 1687 aaPredicted RBP34.37■■■■□ 3.09
ACTB-203ENST00000417101 MYOM3Q5VTT5 1437 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms