RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 POGZQ7Z3K3 1410 aa35.53■■■■□ 3.28
APTR-202ENST00000416650 RIMS1Q86UR5 1692 aaKnown RBP35.52■■■■□ 3.28
APTR-202ENST00000416650 CLIP1P30622 1438 aa35.51■■■■□ 3.28
APTR-202ENST00000416650 MAGI2Q86UL8 1455 aa35.51■■■■□ 3.28
APTR-202ENST00000416650 SCAPERQ9BY12 1400 aa35.49■■■■□ 3.27
APTR-202ENST00000416650 CCDC18Q5T9S5 1454 aa35.49■■■■□ 3.27
APTR-202ENST00000416650 ARID4BQ4LE39 1312 aaPredicted RBP35.49■■■■□ 3.27
APTR-202ENST00000416650 CASKIN1Q8WXD9 1431 aa35.49■■■■□ 3.27
APTR-202ENST00000416650 YEATS2Q9ULM3 1422 aa35.49■■■■□ 3.27
APTR-202ENST00000416650 CDC42BPBQ9Y5S2 1711 aa35.48■■■■□ 3.27
APTR-202ENST00000416650 ARHGAP5Q13017 1502 aa35.45■■■■□ 3.27
APTR-202ENST00000416650 PREX2Q70Z35 1606 aa35.44■■■■□ 3.26
APTR-202ENST00000416650 FYCO1Q9BQS8 1478 aa35.41■■■■□ 3.26
APTR-202ENST00000416650 EFCAB2Q5VUJ9 269 aa35.4■■■■□ 3.26
APTR-202ENST00000416650 FER1L4A9Z1Z3 1794 aa35.39■■■■□ 3.26
APTR-202ENST00000416650 KDM5CP41229 1560 aa35.37■■■■□ 3.25
APTR-202ENST00000416650 CDC42BPAQ5VT25 1732 aa35.36■■■■□ 3.25
APTR-202ENST00000416650 ZNF518AQ6AHZ1 1483 aa35.35■■■■□ 3.25
APTR-202ENST00000416650 ITSN2Q9NZM3 1697 aa35.31■■■■□ 3.24
APTR-202ENST00000416650 C9orf84Q5VXU9 1444 aa35.29■■■■□ 3.24
APTR-202ENST00000416650 ATP10AO60312 1499 aa35.29■■■■□ 3.24
APTR-202ENST00000416650 ABCC1P33527 1531 aa35.28■■■■□ 3.24
APTR-202ENST00000416650 DIP2CQ9Y2E4 1556 aa35.24■■■■□ 3.23
APTR-202ENST00000416650 LMTK3Q96Q04 1460 aa35.23■■■■□ 3.23
APTR-202ENST00000416650 ARHGEF12Q9NZN5 1544 aa35.22■■■■□ 3.23
APTR-202ENST00000416650 ABCA6Q8N139 1617 aa35.22■■■■□ 3.23
APTR-202ENST00000416650 REREQ9P2R6 1566 aa35.18■■■■□ 3.22
APTR-202ENST00000416650 AFAP1Q8N556 730 aa35.15■■■■□ 3.22
APTR-202ENST00000416650 MLECQ14165 292 aa35.14■■■■□ 3.22
APTR-202ENST00000416650 MLH3Q9UHC1 1453 aa35.14■■■■□ 3.22
APTR-202ENST00000416650 ILDR1Q86SU0 546 aaPredicted RBP35.13■■■■□ 3.21
APTR-202ENST00000416650 SAMD9LQ8IVG5 1584 aa35.13■■■■□ 3.21
APTR-202ENST00000416650 KIDINS220Q9ULH0 1771 aa35.12■■■■□ 3.21
APTR-202ENST00000416650 TRAPPC8Q9Y2L5 1435 aa35.11■■■■□ 3.21
APTR-202ENST00000416650 PREX1Q8TCU6 1659 aa35.06■■■■□ 3.2
APTR-202ENST00000416650 SYCP2Q9BX26 1530 aa35.05■■■■□ 3.2
APTR-202ENST00000416650 GPATCH8Q9UKJ3 1502 aaKnown RBP35.05■■■■□ 3.2
APTR-202ENST00000416650 PLPPR3Q6T4P5 718 aa35.04■■■■□ 3.2
APTR-202ENST00000416650 MYT1LQ9UL68 1186 aa35.04■■■■□ 3.2
APTR-202ENST00000416650 AGLP35573 1532 aa35.01■■■■□ 3.2
APTR-202ENST00000416650 CEP162Q5TB80 1403 aa35■■■■□ 3.19
APTR-202ENST00000416650 EHBP1L1Q8N3D4 1523 aa34.98■■■■□ 3.19
APTR-202ENST00000416650 MTUS2Q5JR59 1369 aa34.96■■■■□ 3.19
APTR-202ENST00000416650 C3P01024 1663 aa34.95■■■■□ 3.19
APTR-202ENST00000416650 TIAM1Q13009 1591 aa34.95■■■■□ 3.18
APTR-202ENST00000416650 INO80Q9ULG1 1556 aaPredicted RBP34.93■■■■□ 3.18
APTR-202ENST00000416650 PLEKHH2Q8IVE3 1493 aa34.92■■■■□ 3.18
APTR-202ENST00000416650 ZNF777Q9ULD5 760 aaPredicted RBP34.92■■■■□ 3.18
APTR-202ENST00000416650 SETD1BQ9UPS6 1966 aaKnown RBP34.92■■■■□ 3.18
APTR-202ENST00000416650 CCNB3Q8WWL7 1395 aa34.91■■■■□ 3.18
APTR-202ENST00000416650 HSPA2P54652 639 aa34.9■■■■□ 3.18
APTR-202ENST00000416650 ATP7AQ04656 1500 aa34.89■■■■□ 3.18
APTR-202ENST00000416650 SUPT6HQ7KZ85 1726 aaKnown RBP34.88■■■■□ 3.17
APTR-202ENST00000416650 KIAA1107Q9UPP5 1409 aa34.88■■■■□ 3.17
APTR-202ENST00000416650 CFDP1Q9UEE9 299 aaPredicted RBP34.84■■■■□ 3.17
APTR-202ENST00000416650 CEBPAP49715 358 aaPredicted RBP34.83■■■■□ 3.17
APTR-202ENST00000416650 MROH2AA6NES4 1674 aa34.82■■■■□ 3.17
APTR-202ENST00000416650 PLXNC1O60486 1568 aa34.82■■■■□ 3.16
APTR-202ENST00000416650 SPAG9O60271 1321 aaKnown RBP34.81■■■■□ 3.16
APTR-202ENST00000416650 HNRNPMP52272 730 aaKnown RBP eCLIP34.8■■■■□ 3.16
APTR-202ENST00000416650 ADGBQ8N7X0 1667 aa34.79■■■■□ 3.16
APTR-202ENST00000416650 UHRF1BP1Q6BDS2 1440 aa34.76■■■■□ 3.16
APTR-202ENST00000416650 STRCQ7RTU9 1775 aa34.75■■■■□ 3.15
APTR-202ENST00000416650 CNTLNQ9NXG0 1405 aa34.75■■■■□ 3.15
APTR-202ENST00000416650 ESF1Q9H501 851 aaKnown RBP34.71■■■■□ 3.15
APTR-202ENST00000416650 A2MP01023 1474 aa34.71■■■■□ 3.15
APTR-202ENST00000416650 CLTCQ00610 1675 aaKnown RBP34.7■■■■□ 3.15
APTR-202ENST00000416650 FBXO41Q8TF61 875 aa34.7■■■■□ 3.15
APTR-202ENST00000416650 NCOA2Q15596 1464 aa34.69■■■■□ 3.14
APTR-202ENST00000416650 MBD5Q9P267 1494 aa34.68■■■■□ 3.14
APTR-202ENST00000416650 ZNF644Q9H582 1327 aaPredicted RBP34.65■■■■□ 3.14
APTR-202ENST00000416650 VPS8Q8N3P4 1428 aa34.64■■■■□ 3.14
APTR-202ENST00000416650 CAMSAP2Q08AD1 1489 aa34.62■■■■□ 3.13
APTR-202ENST00000416650 RTEL1-TNFRSF6BF6WH68 1400 aa34.58■■■■□ 3.13
APTR-202ENST00000416650 CCDC141Q6ZP82 1450 aa34.58■■■■□ 3.13
APTR-202ENST00000416650 NPATQ14207 1427 aa34.57■■■■□ 3.13
APTR-202ENST00000416650 ZNF142P52746 1687 aaPredicted RBP34.54■■■■□ 3.12
APTR-202ENST00000416650 LRRC9Q6ZRR7 1453 aa34.54■■■■□ 3.12
APTR-202ENST00000416650 LOC105371045A0A1W2PR82 267 aa34.54■■■■□ 3.12
APTR-202ENST00000416650 MYO3AQ8NEV4 1616 aa34.54■■■■□ 3.12
APTR-202ENST00000416650 ARHGEF5Q12774 1597 aa34.53■■■■□ 3.12
APTR-202ENST00000416650 ZMYM3Q14202 1370 aa34.51■■■■□ 3.12
APTR-202ENST00000416650 MAP3K1Q13233 1512 aa34.49■■■■□ 3.11
APTR-202ENST00000416650 DMRT2Q9Y5R5 561 aa34.46■■■■□ 3.11
APTR-202ENST00000416650 GGT6Q6P531 493 aa34.44■■■■□ 3.1
APTR-202ENST00000416650 NCOA1Q15788 1441 aa34.44■■■■□ 3.1
APTR-202ENST00000416650 CERKQ8TCT0 537 aa34.43■■■■□ 3.1
APTR-202ENST00000416650 DHX29Q7Z478 1369 aaKnown RBP34.43■■■■□ 3.1
APTR-202ENST00000416650 PTPRTO14522 1441 aa34.43■■■■□ 3.1
APTR-202ENST00000416650 CAMSAP1Q5T5Y3 1602 aa34.43■■■■□ 3.1
APTR-202ENST00000416650 PTPRKQ15262 1439 aa34.41■■■■□ 3.1
APTR-202ENST00000416650 CEP170BQ9Y4F5 1589 aaPredicted RBP34.4■■■■□ 3.1
APTR-202ENST00000416650 FAM135AQ9P2D6 1515 aa34.4■■■■□ 3.1
APTR-202ENST00000416650 MAST1Q9Y2H9 1570 aa34.38■■■■□ 3.09
APTR-202ENST00000416650 RSPH4AQ5TD94 716 aa34.38■■■■□ 3.09
APTR-202ENST00000416650 PPP6R1Q9UPN7 881 aa34.38■■■■□ 3.09
APTR-202ENST00000416650 KDM5DQ9BY66 1539 aa34.36■■■■□ 3.09
APTR-202ENST00000416650 MYOM3Q5VTT5 1437 aa34.3■■■■□ 3.08
APTR-202ENST00000416650 KANK4Q5T7N3 995 aaPredicted RBP34.3■■■■□ 3.08
APTR-202ENST00000416650 RNF17Q9BXT8 1623 aaKnown RBP34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms