RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 CLIP1P30622 1438 aa18.64■□□□□ 0.57
SNX30-202ENST00000416585 MAGI2Q86UL8 1455 aa18.63■□□□□ 0.57
SNX30-202ENST00000416585 ILDR1Q86SU0 546 aaPredicted RBP18.62■□□□□ 0.57
SNX30-202ENST00000416585 PLCH2O75038 1416 aa18.62■□□□□ 0.57
SNX30-202ENST00000416585 ARHGAP5Q13017 1502 aa18.6■□□□□ 0.57
SNX30-202ENST00000416585 SCAPERQ9BY12 1400 aa18.6■□□□□ 0.57
SNX30-202ENST00000416585 PCF11O94913 1555 aaKnown RBP18.59■□□□□ 0.57
SNX30-202ENST00000416585 SIGLEC1Q9BZZ2 1709 aa18.59■□□□□ 0.57
SNX30-202ENST00000416585 CDC42BPBQ9Y5S2 1711 aa18.58■□□□□ 0.57
SNX30-202ENST00000416585 TROQ12816 1431 aaPredicted RBP18.57■□□□□ 0.56
SNX30-202ENST00000416585 EFCAB2Q5VUJ9 269 aa18.57■□□□□ 0.56
SNX30-202ENST00000416585 CCDC18Q5T9S5 1454 aa18.57■□□□□ 0.56
SNX30-202ENST00000416585 YEATS2Q9ULM3 1422 aa18.57■□□□□ 0.56
SNX30-202ENST00000416585 PREX2Q70Z35 1606 aa18.56■□□□□ 0.56
SNX30-202ENST00000416585 ZNF518AQ6AHZ1 1483 aa18.54■□□□□ 0.56
SNX30-202ENST00000416585 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
SNX30-202ENST00000416585 MYT1LQ9UL68 1186 aa18.54■□□□□ 0.56
SNX30-202ENST00000416585 C9orf84Q5VXU9 1444 aa18.52■□□□□ 0.56
SNX30-202ENST00000416585 CDC42BPAQ5VT25 1732 aa18.52■□□□□ 0.55
SNX30-202ENST00000416585 ITSN2Q9NZM3 1697 aa18.51■□□□□ 0.55
SNX30-202ENST00000416585 MLECQ14165 292 aa18.51■□□□□ 0.55
SNX30-202ENST00000416585 ATP10AO60312 1499 aa18.51■□□□□ 0.55
SNX30-202ENST00000416585 LMTK3Q96Q04 1460 aa18.51■□□□□ 0.55
SNX30-202ENST00000416585 KDM5CP41229 1560 aa18.5■□□□□ 0.55
SNX30-202ENST00000416585 PREX1Q8TCU6 1659 aa18.5■□□□□ 0.55
SNX30-202ENST00000416585 CASKIN1Q8WXD9 1431 aa18.49■□□□□ 0.55
SNX30-202ENST00000416585 FYCO1Q9BQS8 1478 aa18.47■□□□□ 0.55
SNX30-202ENST00000416585 ABCC1P33527 1531 aa18.45■□□□□ 0.54
SNX30-202ENST00000416585 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
SNX30-202ENST00000416585 DIP2CQ9Y2E4 1556 aa18.45■□□□□ 0.54
SNX30-202ENST00000416585 ABCA6Q8N139 1617 aa18.45■□□□□ 0.54
SNX30-202ENST00000416585 REREQ9P2R6 1566 aa18.42■□□□□ 0.54
SNX30-202ENST00000416585 SETD1BQ9UPS6 1966 aaKnown RBP18.42■□□□□ 0.54
SNX30-202ENST00000416585 AFAP1Q8N556 730 aa18.39■□□□□ 0.53
SNX30-202ENST00000416585 KIDINS220Q9ULH0 1771 aa18.39■□□□□ 0.53
SNX30-202ENST00000416585 MLH3Q9UHC1 1453 aa18.39■□□□□ 0.53
SNX30-202ENST00000416585 C3P01024 1663 aa18.38■□□□□ 0.53
SNX30-202ENST00000416585 FBXO41Q8TF61 875 aa18.38■□□□□ 0.53
SNX30-202ENST00000416585 HSPA2P54652 639 aa18.37■□□□□ 0.53
SNX30-202ENST00000416585 ESF1Q9H501 851 aaKnown RBP18.37■□□□□ 0.53
SNX30-202ENST00000416585 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
SNX30-202ENST00000416585 SAMD9LQ8IVG5 1584 aa18.35■□□□□ 0.53
SNX30-202ENST00000416585 AGLP35573 1532 aa18.33■□□□□ 0.53
SNX30-202ENST00000416585 SYCP2Q9BX26 1530 aa18.33■□□□□ 0.53
SNX30-202ENST00000416585 TRAPPC8Q9Y2L5 1435 aa18.33■□□□□ 0.53
SNX30-202ENST00000416585 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.52
SNX30-202ENST00000416585 UHRF1BP1Q6BDS2 1440 aa18.32■□□□□ 0.52
SNX30-202ENST00000416585 MROH2AA6NES4 1674 aa18.31■□□□□ 0.52
SNX30-202ENST00000416585 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
SNX30-202ENST00000416585 PLEKHH2Q8IVE3 1493 aa18.29■□□□□ 0.52
SNX30-202ENST00000416585 CEBPAP49715 358 aaPredicted RBP18.29■□□□□ 0.52
SNX30-202ENST00000416585 STRCQ7RTU9 1775 aa18.28■□□□□ 0.52
SNX30-202ENST00000416585 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
SNX30-202ENST00000416585 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
SNX30-202ENST00000416585 EHBP1L1Q8N3D4 1523 aa18.28■□□□□ 0.52
SNX30-202ENST00000416585 GPATCH8Q9UKJ3 1502 aaKnown RBP18.28■□□□□ 0.52
SNX30-202ENST00000416585 ADGBQ8N7X0 1667 aa18.28■□□□□ 0.52
SNX30-202ENST00000416585 INO80Q9ULG1 1556 aaPredicted RBP18.26■□□□□ 0.51
SNX30-202ENST00000416585 CNTLNQ9NXG0 1405 aa18.26■□□□□ 0.51
SNX30-202ENST00000416585 SPAG9O60271 1321 aaKnown RBP18.25■□□□□ 0.51
SNX30-202ENST00000416585 CLTCQ00610 1675 aaKnown RBP18.25■□□□□ 0.51
SNX30-202ENST00000416585 CFDP1Q9UEE9 299 aaPredicted RBP18.25■□□□□ 0.51
SNX30-202ENST00000416585 TIAM1Q13009 1591 aa18.23■□□□□ 0.51
SNX30-202ENST00000416585 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
SNX30-202ENST00000416585 HNRNPMP52272 730 aaKnown RBP eCLIP18.22■□□□□ 0.51
SNX30-202ENST00000416585 KIAA1107Q9UPP5 1409 aa18.21■□□□□ 0.51
SNX30-202ENST00000416585 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
SNX30-202ENST00000416585 CERKQ8TCT0 537 aa18.19■□□□□ 0.5
SNX30-202ENST00000416585 PLXNC1O60486 1568 aa18.18■□□□□ 0.5
SNX30-202ENST00000416585 A2MP01023 1474 aa18.18■□□□□ 0.5
SNX30-202ENST00000416585 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
SNX30-202ENST00000416585 ZNF142P52746 1687 aaPredicted RBP18.15■□□□□ 0.5
SNX30-202ENST00000416585 NPATQ14207 1427 aa18.14■□□□□ 0.49
SNX30-202ENST00000416585 CAMSAP1Q5T5Y3 1602 aa18.12■□□□□ 0.49
SNX30-202ENST00000416585 PTPRTO14522 1441 aa18.11■□□□□ 0.49
SNX30-202ENST00000416585 ZMYM3Q14202 1370 aa18.1■□□□□ 0.49
SNX30-202ENST00000416585 GGT6Q6P531 493 aa18.1■□□□□ 0.49
SNX30-202ENST00000416585 CAMSAP2Q08AD1 1489 aa18.08■□□□□ 0.49
SNX30-202ENST00000416585 NCOA2Q15596 1464 aa18.08■□□□□ 0.49
SNX30-202ENST00000416585 CCDC141Q6ZP82 1450 aa18.08■□□□□ 0.49
SNX30-202ENST00000416585 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.48
SNX30-202ENST00000416585 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
SNX30-202ENST00000416585 NCOA1Q15788 1441 aa18.07■□□□□ 0.48
SNX30-202ENST00000416585 ZNF644Q9H582 1327 aaPredicted RBP18.06■□□□□ 0.48
SNX30-202ENST00000416585 MBD5Q9P267 1494 aa18.06■□□□□ 0.48
SNX30-202ENST00000416585 POLR1AO95602 1720 aaPredicted RBP18.05■□□□□ 0.48
SNX30-202ENST00000416585 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
SNX30-202ENST00000416585 ARHGEF5Q12774 1597 aa18.03■□□□□ 0.48
SNX30-202ENST00000416585 FAM135AQ9P2D6 1515 aa18.03■□□□□ 0.48
SNX30-202ENST00000416585 RSPH4AQ5TD94 716 aa18.02■□□□□ 0.48
SNX30-202ENST00000416585 PTPRKQ15262 1439 aa18.01■□□□□ 0.47
SNX30-202ENST00000416585 VPS8Q8N3P4 1428 aa18.01■□□□□ 0.47
SNX30-202ENST00000416585 KDM5DQ9BY66 1539 aa18.01■□□□□ 0.47
SNX30-202ENST00000416585 DHX29Q7Z478 1369 aaKnown RBP18.01■□□□□ 0.47
SNX30-202ENST00000416585 PLA2R1Q13018 1463 aa18■□□□□ 0.47
SNX30-202ENST00000416585 IQSEC2Q5JU85 1478 aa17.99■□□□□ 0.47
SNX30-202ENST00000416585 LTBP4Q8N2S1 1624 aa17.98■□□□□ 0.47
SNX30-202ENST00000416585 KIF3BO15066 747 aa17.98■□□□□ 0.47
SNX30-202ENST00000416585 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
SNX30-202ENST00000416585 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms