RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 KDM4FA0A1W2PPD8 638 aa14.31□□□□□ -0.12
CHRNA1-206ENST00000416004 MTUS2Q5JR59 1369 aa14.31□□□□□ -0.12
CHRNA1-206ENST00000416004 SCAPERQ9BY12 1400 aa14.3□□□□□ -0.12
CHRNA1-206ENST00000416004 ARID4BQ4LE39 1312 aaPredicted RBP14.3□□□□□ -0.12
CHRNA1-206ENST00000416004 MYT1LQ9UL68 1186 aa14.29□□□□□ -0.12
CHRNA1-206ENST00000416004 PREX2Q70Z35 1606 aa14.29□□□□□ -0.12
CHRNA1-206ENST00000416004 FRMPD1Q5SYB0 1578 aa14.28□□□□□ -0.12
CHRNA1-206ENST00000416004 MAGI2Q86UL8 1455 aa14.28□□□□□ -0.12
CHRNA1-206ENST00000416004 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.12
CHRNA1-206ENST00000416004 ARHGEF40Q8TER5 1519 aa14.27□□□□□ -0.13
CHRNA1-206ENST00000416004 ZMYM4Q5VZL5 1548 aa14.26□□□□□ -0.13
CHRNA1-206ENST00000416004 ZFYVE16Q7Z3T8 1539 aa14.26□□□□□ -0.13
CHRNA1-206ENST00000416004 POGZQ7Z3K3 1410 aa14.26□□□□□ -0.13
CHRNA1-206ENST00000416004 ZNF518AQ6AHZ1 1483 aa14.26□□□□□ -0.13
CHRNA1-206ENST00000416004 CDC42BPAQ5VT25 1732 aa14.26□□□□□ -0.13
CHRNA1-206ENST00000416004 EHBP1L1Q8N3D4 1523 aa14.25□□□□□ -0.13
CHRNA1-206ENST00000416004 APLP2Q06481 763 aa14.25□□□□□ -0.13
CHRNA1-206ENST00000416004 CCNB3Q8WWL7 1395 aa14.24□□□□□ -0.13
CHRNA1-206ENST00000416004 KANK4Q5T7N3 995 aaPredicted RBP14.24□□□□□ -0.13
CHRNA1-206ENST00000416004 ITSN2Q9NZM3 1697 aa14.23□□□□□ -0.13
CHRNA1-206ENST00000416004 ZNF777Q9ULD5 760 aaPredicted RBP14.23□□□□□ -0.13
CHRNA1-206ENST00000416004 TRIM26Q12899 539 aaPredicted RBP14.21□□□□□ -0.13
CHRNA1-206ENST00000416004 PCGF6Q9BYE7 350 aa14.21□□□□□ -0.13
CHRNA1-206ENST00000416004 SUPT6HQ7KZ85 1726 aaKnown RBP14.21□□□□□ -0.13
CHRNA1-206ENST00000416004 CFDP1Q9UEE9 299 aaPredicted RBP14.21□□□□□ -0.14
CHRNA1-206ENST00000416004 BCORL1Q5H9F3 1711 aa14.2□□□□□ -0.14
CHRNA1-206ENST00000416004 TIAM1Q13009 1591 aa14.2□□□□□ -0.14
CHRNA1-206ENST00000416004 PLEKHH2Q8IVE3 1493 aa14.2□□□□□ -0.14
CHRNA1-206ENST00000416004 HECW2Q9P2P5 1572 aa14.2□□□□□ -0.14
CHRNA1-206ENST00000416004 ABCC1P33527 1531 aa14.2□□□□□ -0.14
CHRNA1-206ENST00000416004 MAP3K1Q13233 1512 aa14.18□□□□□ -0.14
CHRNA1-206ENST00000416004 ATP10AO60312 1499 aa14.18□□□□□ -0.14
CHRNA1-206ENST00000416004 C9orf84Q5VXU9 1444 aa14.18□□□□□ -0.14
CHRNA1-206ENST00000416004 KDM5CP41229 1560 aa14.17□□□□□ -0.14
CHRNA1-206ENST00000416004 GPATCH8Q9UKJ3 1502 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-206ENST00000416004 ADAMTSL3P82987 1691 aa14.17□□□□□ -0.14
CHRNA1-206ENST00000416004 AFAP1Q8N556 730 aa14.16□□□□□ -0.14
CHRNA1-206ENST00000416004 YEATS2Q9ULM3 1422 aa14.16□□□□□ -0.14
CHRNA1-206ENST00000416004 LRRC9Q6ZRR7 1453 aa14.15□□□□□ -0.14
CHRNA1-206ENST00000416004 SAMD9LQ8IVG5 1584 aa14.15□□□□□ -0.14
CHRNA1-206ENST00000416004 SYCP2Q9BX26 1530 aa14.14□□□□□ -0.15
CHRNA1-206ENST00000416004 MLH3Q9UHC1 1453 aa14.14□□□□□ -0.15
CHRNA1-206ENST00000416004 MADDQ8WXG6 1647 aa14.13□□□□□ -0.15
CHRNA1-206ENST00000416004 RIMS1Q86UR5 1692 aaKnown RBP14.13□□□□□ -0.15
CHRNA1-206ENST00000416004 FER1L4A9Z1Z3 1794 aa14.13□□□□□ -0.15
CHRNA1-206ENST00000416004 ESF1Q9H501 851 aaKnown RBP14.12□□□□□ -0.15
CHRNA1-206ENST00000416004 KIAA1107Q9UPP5 1409 aa14.12□□□□□ -0.15
CHRNA1-206ENST00000416004 SPAG9O60271 1321 aaKnown RBP14.12□□□□□ -0.15
CHRNA1-206ENST00000416004 MLECQ14165 292 aa14.12□□□□□ -0.15
CHRNA1-206ENST00000416004 TRAPPC8Q9Y2L5 1435 aa14.12□□□□□ -0.15
CHRNA1-206ENST00000416004 PTPRMP28827 1452 aa14.11□□□□□ -0.15
CHRNA1-206ENST00000416004 NCOA2Q15596 1464 aa14.11□□□□□ -0.15
CHRNA1-206ENST00000416004 HNRNPMP52272 730 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHRNA1-206ENST00000416004 DIP2CQ9Y2E4 1556 aa14.11□□□□□ -0.15
CHRNA1-206ENST00000416004 ARHGEF12Q9NZN5 1544 aa14.1□□□□□ -0.15
CHRNA1-206ENST00000416004 REREQ9P2R6 1566 aa14.1□□□□□ -0.15
CHRNA1-206ENST00000416004 ABCA6Q8N139 1617 aa14.1□□□□□ -0.15
CHRNA1-206ENST00000416004 KIDINS220Q9ULH0 1771 aa14.09□□□□□ -0.15
CHRNA1-206ENST00000416004 RSPH4AQ5TD94 716 aa14.08□□□□□ -0.16
CHRNA1-206ENST00000416004 ATP7AQ04656 1500 aa14.07□□□□□ -0.16
CHRNA1-206ENST00000416004 PLPPR3Q6T4P5 718 aa14.06□□□□□ -0.16
CHRNA1-206ENST00000416004 SIGLEC1Q9BZZ2 1709 aa14.06□□□□□ -0.16
CHRNA1-206ENST00000416004 CAMSAP2Q08AD1 1489 aa14.05□□□□□ -0.16
CHRNA1-206ENST00000416004 ADGBQ8N7X0 1667 aa14.05□□□□□ -0.16
CHRNA1-206ENST00000416004 AGLP35573 1532 aa14.04□□□□□ -0.16
CHRNA1-206ENST00000416004 INO80Q9ULG1 1556 aaPredicted RBP14.04□□□□□ -0.16
CHRNA1-206ENST00000416004 TSPY4P0CV99 314 aa14.04□□□□□ -0.16
CHRNA1-206ENST00000416004 TSPY10P0CW01 314 aa14.04□□□□□ -0.16
CHRNA1-206ENST00000416004 CCDC141Q6ZP82 1450 aa14.03□□□□□ -0.16
CHRNA1-206ENST00000416004 ZNF644Q9H582 1327 aaPredicted RBP14.02□□□□□ -0.17
CHRNA1-206ENST00000416004 RTEL1-TNFRSF6BF6WH68 1400 aa14.01□□□□□ -0.17
CHRNA1-206ENST00000416004 A2MP01023 1474 aa14.01□□□□□ -0.17
CHRNA1-206ENST00000416004 MIA2Q96PC5 1412 aa14.01□□□□□ -0.17
CHRNA1-206ENST00000416004 MYOM3Q5VTT5 1437 aa14□□□□□ -0.17
CHRNA1-206ENST00000416004 CNTLNQ9NXG0 1405 aa14□□□□□ -0.17
CHRNA1-206ENST00000416004 RRBP1Q9P2E9 1410 aaKnown RBP14□□□□□ -0.17
CHRNA1-206ENST00000416004 ARHGEF5Q12774 1597 aa13.99□□□□□ -0.17
CHRNA1-206ENST00000416004 MBD5Q9P267 1494 aa13.99□□□□□ -0.17
CHRNA1-206ENST00000416004 PREX1Q8TCU6 1659 aa13.97□□□□□ -0.17
CHRNA1-206ENST00000416004 SETD1BQ9UPS6 1966 aaKnown RBP13.96□□□□□ -0.18
CHRNA1-206ENST00000416004 MROH2AA6NES4 1674 aa13.95□□□□□ -0.18
CHRNA1-206ENST00000416004 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
CHRNA1-206ENST00000416004 GGT6Q6P531 493 aa13.95□□□□□ -0.18
CHRNA1-206ENST00000416004 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
CHRNA1-206ENST00000416004 C3P01024 1663 aa13.94□□□□□ -0.18
CHRNA1-206ENST00000416004 DHX29Q7Z478 1369 aaKnown RBP13.94□□□□□ -0.18
CHRNA1-206ENST00000416004 PTPN23Q9H3S7 1636 aa13.93□□□□□ -0.18
CHRNA1-206ENST00000416004 FGD6Q6ZV73 1430 aa13.93□□□□□ -0.18
CHRNA1-206ENST00000416004 UHRF1BP1Q6BDS2 1440 aa13.92□□□□□ -0.18
CHRNA1-206ENST00000416004 CEBPAP49715 358 aaPredicted RBP13.92□□□□□ -0.18
CHRNA1-206ENST00000416004 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
CHRNA1-206ENST00000416004 LMTK3Q96Q04 1460 aa13.92□□□□□ -0.18
CHRNA1-206ENST00000416004 CLTCQ00610 1675 aaKnown RBP13.92□□□□□ -0.18
CHRNA1-206ENST00000416004 MAST1Q9Y2H9 1570 aa13.92□□□□□ -0.18
CHRNA1-206ENST00000416004 KIF3BO15066 747 aa13.91□□□□□ -0.18
CHRNA1-206ENST00000416004 FAM50AQ14320 339 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-206ENST00000416004 FAM135AQ9P2D6 1515 aa13.88□□□□□ -0.19
CHRNA1-206ENST00000416004 CROCC2H7BZ55 1655 aa13.88□□□□□ -0.19
CHRNA1-206ENST00000416004 ZMYM3Q14202 1370 aa13.87□□□□□ -0.19
CHRNA1-206ENST00000416004 EIF2AK4Q9P2K8 1649 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms