RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
EPHA4-204ENST00000415749 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
EPHA4-204ENST00000415749 LARP6Q9BRS8 491 aaKnown RBP12.03□□□□□ -0.48
EPHA4-204ENST00000415749 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
EPHA4-204ENST00000415749 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
EPHA4-204ENST00000415749 TPRNQ4KMQ1 711 aa12.01□□□□□ -0.49
EPHA4-204ENST00000415749 DDX27Q96GQ7 796 aaKnown RBP12.01□□□□□ -0.49
EPHA4-204ENST00000415749 MFSD10Q14728 455 aa12□□□□□ -0.49
EPHA4-204ENST00000415749 METRNQ9UJH8 293 aa12□□□□□ -0.49
EPHA4-204ENST00000415749 E2F4Q16254 413 aa11.99□□□□□ -0.49
EPHA4-204ENST00000415749 TMEM121BQ9BXQ6 578 aaPredicted RBP11.99□□□□□ -0.49
EPHA4-204ENST00000415749 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
EPHA4-204ENST00000415749 TMC2Q8TDI7 906 aa11.97□□□□□ -0.49
EPHA4-204ENST00000415749 KCNV2Q8TDN2 545 aa11.97□□□□□ -0.49
EPHA4-204ENST00000415749 GPHNQ9NQX3 736 aaPredicted RBP11.97□□□□□ -0.49
EPHA4-204ENST00000415749 COLQQ9Y215 455 aaPredicted RBP11.97□□□□□ -0.49
EPHA4-204ENST00000415749 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
EPHA4-204ENST00000415749 PPP1R15BQ5SWA1 713 aa11.92□□□□□ -0.5
EPHA4-204ENST00000415749 UNC13AQ9UPW8 1703 aa11.89□□□□□ -0.51
EPHA4-204ENST00000415749 BICRAQ9NZM4 1560 aa11.89□□□□□ -0.51
EPHA4-204ENST00000415749 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
EPHA4-204ENST00000415749 FOXK1P85037 733 aa11.87□□□□□ -0.51
EPHA4-204ENST00000415749 CAMK2BQ13554 666 aa11.87□□□□□ -0.51
EPHA4-204ENST00000415749 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
EPHA4-204ENST00000415749 C2orf72A6NCS6 295 aa11.85□□□□□ -0.51
EPHA4-204ENST00000415749 DSG2Q14126 1118 aa11.85□□□□□ -0.51
EPHA4-204ENST00000415749 CECR2Q9BXF3 1484 aa11.84□□□□□ -0.51
EPHA4-204ENST00000415749 ARIH1Q9Y4X5 557 aaPredicted RBP11.84□□□□□ -0.51
EPHA4-204ENST00000415749 KIF3CO14782 793 aa11.83□□□□□ -0.52
EPHA4-204ENST00000415749 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
EPHA4-204ENST00000415749 PLPP6Q8IY26 295 aa11.81□□□□□ -0.52
EPHA4-204ENST00000415749 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.79□□□□□ -0.52
EPHA4-204ENST00000415749 TMEM92Q6UXU6 159 aa11.77□□□□□ -0.53
EPHA4-204ENST00000415749 CC2D2AQ9P2K1 1620 aa11.77□□□□□ -0.53
EPHA4-204ENST00000415749 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
EPHA4-204ENST00000415749 SPDYE16A6NNV3 312 aaPredicted RBP11.73□□□□□ -0.53
EPHA4-204ENST00000415749 SMYD5Q6GMV2 418 aa11.73□□□□□ -0.53
EPHA4-204ENST00000415749 EMILIN3Q9NT22 766 aa11.73□□□□□ -0.53
EPHA4-204ENST00000415749 DPYSL4O14531 572 aa11.71□□□□□ -0.53
EPHA4-204ENST00000415749 SEMA3EO15041 775 aa11.71□□□□□ -0.53
EPHA4-204ENST00000415749 TESPA1A2RU30 521 aaPredicted RBP11.7□□□□□ -0.54
EPHA4-204ENST00000415749 MAP3K9P80192 1104 aa11.69□□□□□ -0.54
EPHA4-204ENST00000415749 MAMSTRQ6ZN01 415 aa11.69□□□□□ -0.54
EPHA4-204ENST00000415749 PDIA6Q15084 440 aa11.68□□□□□ -0.54
EPHA4-204ENST00000415749 TBC1D12O60347 775 aa11.66□□□□□ -0.54
EPHA4-204ENST00000415749 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
EPHA4-204ENST00000415749 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.66□□□□□ -0.54
EPHA4-204ENST00000415749 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
EPHA4-204ENST00000415749 SHROOM4Q9ULL8 1493 aa11.65□□□□□ -0.54
EPHA4-204ENST00000415749 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
EPHA4-204ENST00000415749 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
EPHA4-204ENST00000415749 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
EPHA4-204ENST00000415749 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
EPHA4-204ENST00000415749 SLC34A2O95436 690 aa11.63□□□□□ -0.55
EPHA4-204ENST00000415749 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
EPHA4-204ENST00000415749 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
EPHA4-204ENST00000415749 POTEJP0CG39 1038 aa11.59□□□□□ -0.55
EPHA4-204ENST00000415749 SLAIN1Q8ND83 568 aa11.59□□□□□ -0.55
EPHA4-204ENST00000415749 TIMELESSQ9UNS1 1208 aa11.59□□□□□ -0.55
EPHA4-204ENST00000415749 MLLT3P42568 568 aaPredicted RBP11.57□□□□□ -0.56
EPHA4-204ENST00000415749 EVI5O60447 810 aa11.56□□□□□ -0.56
EPHA4-204ENST00000415749 DOK7Q18PE1 504 aa11.55□□□□□ -0.56
EPHA4-204ENST00000415749 RIMBP2O15034 1052 aa11.53□□□□□ -0.56
EPHA4-204ENST00000415749 PTGER2P43116 358 aa11.53□□□□□ -0.56
EPHA4-204ENST00000415749 PCDHGA4Q9Y5G9 962 aa11.52□□□□□ -0.57
EPHA4-204ENST00000415749 GRXCR2A6NFK2 248 aa11.51□□□□□ -0.57
EPHA4-204ENST00000415749 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
EPHA4-204ENST00000415749 ZSWIM6Q9HCJ5 1215 aa11.49□□□□□ -0.57
EPHA4-204ENST00000415749 SNPHO15079 494 aa11.48□□□□□ -0.57
EPHA4-204ENST00000415749 GPIHBP1Q8IV16 184 aa11.48□□□□□ -0.57
EPHA4-204ENST00000415749 ZC3H15Q8WU90 426 aaKnown RBP11.48□□□□□ -0.57
EPHA4-204ENST00000415749 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
EPHA4-204ENST00000415749 GTF3C3Q9Y5Q9 886 aa11.48□□□□□ -0.57
EPHA4-204ENST00000415749 RBM26Q5T8P6 1007 aaKnown RBP11.47□□□□□ -0.57
EPHA4-204ENST00000415749 ZNF710Q8N1W2 664 aa11.47□□□□□ -0.57
EPHA4-204ENST00000415749 DDX12PQ92771 950 aa11.47□□□□□ -0.57
EPHA4-204ENST00000415749 HOXB3P14651 431 aaPredicted RBP11.45□□□□□ -0.58
EPHA4-204ENST00000415749 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
EPHA4-204ENST00000415749 EPAS1Q99814 870 aa11.43□□□□□ -0.58
EPHA4-204ENST00000415749 CUX2O14529 1486 aa11.43□□□□□ -0.58
EPHA4-204ENST00000415749 PHF14O94880 888 aa11.42□□□□□ -0.58
EPHA4-204ENST00000415749 OSBPP22059 807 aa11.42□□□□□ -0.58
EPHA4-204ENST00000415749 ZCCHC6Q5VYS8 1495 aaKnown RBP11.41□□□□□ -0.58
EPHA4-204ENST00000415749 LHX8Q68G74 356 aa11.41□□□□□ -0.58
EPHA4-204ENST00000415749 NUTM2FA1L443 756 aa11.39□□□□□ -0.59
EPHA4-204ENST00000415749 ZMYND10O75800 440 aa11.39□□□□□ -0.59
EPHA4-204ENST00000415749 ARSIQ5FYB1 569 aa11.39□□□□□ -0.59
EPHA4-204ENST00000415749 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
EPHA4-204ENST00000415749 ARXQ96QS3 562 aa11.39□□□□□ -0.59
EPHA4-204ENST00000415749 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
EPHA4-204ENST00000415749 OTUD5Q96G74 571 aa11.38□□□□□ -0.59
EPHA4-204ENST00000415749 NUDT7P0C024 238 aa11.37□□□□□ -0.59
EPHA4-204ENST00000415749 TYW1BQ6NUM6 668 aa11.37□□□□□ -0.59
EPHA4-204ENST00000415749 GPR153Q6NV75 609 aa11.37□□□□□ -0.59
EPHA4-204ENST00000415749 FBXW7Q969H0 707 aa11.37□□□□□ -0.59
EPHA4-204ENST00000415749 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
EPHA4-204ENST00000415749 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
EPHA4-204ENST00000415749 PCDHGA10Q9Y5H3 936 aa11.35□□□□□ -0.59
EPHA4-204ENST00000415749 ERCC6Q03468 1493 aa11.34□□□□□ -0.59
EPHA4-204ENST00000415749 FCHSD2O94868 740 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms