RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 NCOA2Q15596 1464 aa22.45■■□□□ 1.18
SAPCD1-208ENST00000415669 COL17A1Q9UMD9 1497 aaPredicted RBP22.42■■□□□ 1.18
SAPCD1-208ENST00000415669 CCNB3Q8WWL7 1395 aa22.42■■□□□ 1.18
SAPCD1-208ENST00000415669 KANK4Q5T7N3 995 aaPredicted RBP22.42■■□□□ 1.18
SAPCD1-208ENST00000415669 GPATCH8Q9UKJ3 1502 aaKnown RBP22.41■■□□□ 1.18
SAPCD1-208ENST00000415669 AKNAQ7Z591 1439 aa22.41■■□□□ 1.18
SAPCD1-208ENST00000415669 PHLDB1Q86UU1 1377 aa22.41■■□□□ 1.18
SAPCD1-208ENST00000415669 RICTORQ6R327 1708 aa22.4■■□□□ 1.18
SAPCD1-208ENST00000415669 ADGRL1O94910 1474 aa22.4■■□□□ 1.18
SAPCD1-208ENST00000415669 FRMPD1Q5SYB0 1578 aa22.38■■□□□ 1.17
SAPCD1-208ENST00000415669 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
SAPCD1-208ENST00000415669 EFCAB2Q5VUJ9 269 aa22.37■■□□□ 1.17
SAPCD1-208ENST00000415669 ABCC1P33527 1531 aa22.36■■□□□ 1.17
SAPCD1-208ENST00000415669 DENND4BO75064 1496 aaPredicted RBP22.34■■□□□ 1.17
SAPCD1-208ENST00000415669 SCAPERQ9BY12 1400 aa22.31■■□□□ 1.16
SAPCD1-208ENST00000415669 CFDP1Q9UEE9 299 aaPredicted RBP22.31■■□□□ 1.16
SAPCD1-208ENST00000415669 SYCP2Q9BX26 1530 aa22.31■■□□□ 1.16
SAPCD1-208ENST00000415669 ZNF777Q9ULD5 760 aaPredicted RBP22.3■■□□□ 1.16
SAPCD1-208ENST00000415669 POGZQ7Z3K3 1410 aa22.3■■□□□ 1.16
SAPCD1-208ENST00000415669 MYOM3Q5VTT5 1437 aa22.28■■□□□ 1.16
SAPCD1-208ENST00000415669 ZMYM4Q5VZL5 1548 aa22.27■■□□□ 1.16
SAPCD1-208ENST00000415669 RAPGEF3O95398 923 aa22.27■■□□□ 1.16
SAPCD1-208ENST00000415669 PLEKHH2Q8IVE3 1493 aa22.27■■□□□ 1.16
SAPCD1-208ENST00000415669 CAMSAP2Q08AD1 1489 aa22.26■■□□□ 1.15
SAPCD1-208ENST00000415669 ZNF518AQ6AHZ1 1483 aa22.26■■□□□ 1.15
SAPCD1-208ENST00000415669 ARHGEF12Q9NZN5 1544 aa22.26■■□□□ 1.15
SAPCD1-208ENST00000415669 KDM5CP41229 1560 aa22.25■■□□□ 1.15
SAPCD1-208ENST00000415669 ARHGEF40Q8TER5 1519 aa22.23■■□□□ 1.15
SAPCD1-208ENST00000415669 HECW2Q9P2P5 1572 aa22.23■■□□□ 1.15
SAPCD1-208ENST00000415669 PTPN23Q9H3S7 1636 aa22.21■■□□□ 1.15
SAPCD1-208ENST00000415669 TRAPPC8Q9Y2L5 1435 aa22.21■■□□□ 1.15
SAPCD1-208ENST00000415669 ZFYVE16Q7Z3T8 1539 aa22.21■■□□□ 1.15
SAPCD1-208ENST00000415669 ZNF644Q9H582 1327 aaPredicted RBP22.2■■□□□ 1.14
SAPCD1-208ENST00000415669 MIA2Q96PC5 1412 aa22.2■■□□□ 1.14
SAPCD1-208ENST00000415669 KIAA1107Q9UPP5 1409 aa22.2■■□□□ 1.14
SAPCD1-208ENST00000415669 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
SAPCD1-208ENST00000415669 FGD6Q6ZV73 1430 aa22.17■■□□□ 1.14
SAPCD1-208ENST00000415669 ARHGEF5Q12774 1597 aa22.16■■□□□ 1.14
SAPCD1-208ENST00000415669 MAGI2Q86UL8 1455 aa22.15■■□□□ 1.14
SAPCD1-208ENST00000415669 KIDINS220Q9ULH0 1771 aa22.15■■□□□ 1.14
SAPCD1-208ENST00000415669 HNRNPMP52272 730 aaKnown RBP eCLIP22.15■■□□□ 1.14
SAPCD1-208ENST00000415669 AFAP1Q8N556 730 aa22.15■■□□□ 1.14
SAPCD1-208ENST00000415669 INO80Q9ULG1 1556 aaPredicted RBP22.15■■□□□ 1.14
SAPCD1-208ENST00000415669 ABCA6Q8N139 1617 aa22.14■■□□□ 1.14
SAPCD1-208ENST00000415669 MBD5Q9P267 1494 aa22.14■■□□□ 1.13
SAPCD1-208ENST00000415669 CROCC2H7BZ55 1655 aa22.14■■□□□ 1.13
SAPCD1-208ENST00000415669 CCDC141Q6ZP82 1450 aa22.13■■□□□ 1.13
SAPCD1-208ENST00000415669 YEATS2Q9ULM3 1422 aa22.13■■□□□ 1.13
SAPCD1-208ENST00000415669 DIP2CQ9Y2E4 1556 aa22.12■■□□□ 1.13
SAPCD1-208ENST00000415669 ATP7AQ04656 1500 aa22.11■■□□□ 1.13
SAPCD1-208ENST00000415669 TCOF1Q13428 1488 aaKnown RBP22.11■■□□□ 1.13
SAPCD1-208ENST00000415669 MLH3Q9UHC1 1453 aa22.11■■□□□ 1.13
SAPCD1-208ENST00000415669 MYT1LQ9UL68 1186 aa22.11■■□□□ 1.13
SAPCD1-208ENST00000415669 DNMT1P26358 1616 aaKnown RBP22.09■■□□□ 1.13
SAPCD1-208ENST00000415669 SIGLEC1Q9BZZ2 1709 aa22.08■■□□□ 1.12
SAPCD1-208ENST00000415669 ADGBQ8N7X0 1667 aa22.06■■□□□ 1.12
SAPCD1-208ENST00000415669 SPAG9O60271 1321 aaKnown RBP22.06■■□□□ 1.12
SAPCD1-208ENST00000415669 C9orf84Q5VXU9 1444 aa22.04■■□□□ 1.12
SAPCD1-208ENST00000415669 MAST1Q9Y2H9 1570 aa22.04■■□□□ 1.12
SAPCD1-208ENST00000415669 ATP10AO60312 1499 aa22.03■■□□□ 1.12
SAPCD1-208ENST00000415669 REREQ9P2R6 1566 aa22.03■■□□□ 1.12
SAPCD1-208ENST00000415669 RSPH4AQ5TD94 716 aa22.01■■□□□ 1.11
SAPCD1-208ENST00000415669 DAPK1P53355 1430 aa22■■□□□ 1.11
SAPCD1-208ENST00000415669 FAM50AQ14320 339 aaKnown RBP22■■□□□ 1.11
SAPCD1-208ENST00000415669 BCORL1Q5H9F3 1711 aa22■■□□□ 1.11
SAPCD1-208ENST00000415669 SHANK2Q9UPX8 1470 aa21.99■■□□□ 1.11
SAPCD1-208ENST00000415669 RTEL1-TNFRSF6BF6WH68 1400 aa21.98■■□□□ 1.11
SAPCD1-208ENST00000415669 PLXNC1O60486 1568 aa21.98■■□□□ 1.11
SAPCD1-208ENST00000415669 ABCC5O15440 1437 aa21.97■■□□□ 1.11
SAPCD1-208ENST00000415669 TSPY4P0CV99 314 aa21.96■■□□□ 1.11
SAPCD1-208ENST00000415669 TSPY10P0CW01 314 aa21.96■■□□□ 1.11
SAPCD1-208ENST00000415669 ARID4BQ4LE39 1312 aaPredicted RBP21.96■■□□□ 1.11
SAPCD1-208ENST00000415669 RRBP1Q9P2E9 1410 aaKnown RBP21.94■■□□□ 1.1
SAPCD1-208ENST00000415669 A2MP01023 1474 aa21.93■■□□□ 1.1
SAPCD1-208ENST00000415669 FER1L4A9Z1Z3 1794 aa21.92■■□□□ 1.1
SAPCD1-208ENST00000415669 ADAMTSL3P82987 1691 aa21.91■■□□□ 1.1
SAPCD1-208ENST00000415669 AGLP35573 1532 aa21.91■■□□□ 1.1
SAPCD1-208ENST00000415669 MADDQ8WXG6 1647 aa21.91■■□□□ 1.1
SAPCD1-208ENST00000415669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.89■■□□□ 1.1
SAPCD1-208ENST00000415669 RIMS1Q86UR5 1692 aaKnown RBP21.88■■□□□ 1.09
SAPCD1-208ENST00000415669 EIF2AK4Q9P2K8 1649 aaKnown RBP21.86■■□□□ 1.09
SAPCD1-208ENST00000415669 ADGRL2O95490 1459 aa21.85■■□□□ 1.09
SAPCD1-208ENST00000415669 MLECQ14165 292 aa21.85■■□□□ 1.09
SAPCD1-208ENST00000415669 DUOX2Q9NRD8 1548 aa21.85■■□□□ 1.09
SAPCD1-208ENST00000415669 KDM4FA0A1W2PPD8 638 aa21.84■■□□□ 1.09
SAPCD1-208ENST00000415669 CHIC2Q9UKJ5 165 aa21.84■■□□□ 1.09
SAPCD1-208ENST00000415669 DHX29Q7Z478 1369 aaKnown RBP21.83■■□□□ 1.08
SAPCD1-208ENST00000415669 ANKRD30AQ9BXX3 1397 aa21.83■■□□□ 1.08
SAPCD1-208ENST00000415669 KIF15Q9NS87 1388 aa21.83■■□□□ 1.08
SAPCD1-208ENST00000415669 PTPRKQ15262 1439 aa21.82■■□□□ 1.08
SAPCD1-208ENST00000415669 ITGAEP38570 1179 aa21.82■■□□□ 1.08
SAPCD1-208ENST00000415669 RNF17Q9BXT8 1623 aaKnown RBP21.79■■□□□ 1.08
SAPCD1-208ENST00000415669 NCOA1Q15788 1441 aa21.79■■□□□ 1.08
SAPCD1-208ENST00000415669 RRP7BPQ9NSQ0 103 aa21.78■■□□□ 1.08
SAPCD1-208ENST00000415669 CLTCQ00610 1675 aaKnown RBP21.77■■□□□ 1.08
SAPCD1-208ENST00000415669 ERBINQ96RT1 1412 aa21.77■■□□□ 1.08
SAPCD1-208ENST00000415669 GCC2Q8IWJ2 1684 aa21.75■■□□□ 1.07
SAPCD1-208ENST00000415669 ROCK1Q13464 1354 aa21.74■■□□□ 1.07
SAPCD1-208ENST00000415669 KIF3BO15066 747 aa21.74■■□□□ 1.07
SAPCD1-208ENST00000415669 MROH2AA6NES4 1674 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms