RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CAMSAP2Q08AD1 1489 aa21.31■■□□□ 1
HMGA1P1-201ENST00000415560 PLCH2O75038 1416 aa21.3■■□□□ 1
HMGA1P1-201ENST00000415560 EFCAB2Q5VUJ9 269 aa21.3■■□□□ 1
HMGA1P1-201ENST00000415560 MAPKBP1O60336 1514 aa21.29■■□□□ 1
HMGA1P1-201ENST00000415560 ARHGAP5Q13017 1502 aa21.29■■□□□ 1
HMGA1P1-201ENST00000415560 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
HMGA1P1-201ENST00000415560 ABCA9Q8IUA7 1624 aa21.29■■□□□ 1
HMGA1P1-201ENST00000415560 ZNF644Q9H582 1327 aaPredicted RBP21.28■■□□□ 1
HMGA1P1-201ENST00000415560 ARAP3Q8WWN8 1544 aa21.26■□□□□ 0.99
HMGA1P1-201ENST00000415560 PLEKHH2Q8IVE3 1493 aa21.26■□□□□ 0.99
HMGA1P1-201ENST00000415560 DNMT1P26358 1616 aaKnown RBP21.26■□□□□ 0.99
HMGA1P1-201ENST00000415560 DAPK1P53355 1430 aa21.24■□□□□ 0.99
HMGA1P1-201ENST00000415560 SETD5Q9C0A6 1442 aa21.24■□□□□ 0.99
HMGA1P1-201ENST00000415560 TSPY4P0CV99 314 aa21.22■□□□□ 0.99
HMGA1P1-201ENST00000415560 TSPY10P0CW01 314 aa21.22■□□□□ 0.99
HMGA1P1-201ENST00000415560 HRCP23327 699 aa21.22■□□□□ 0.99
HMGA1P1-201ENST00000415560 ABCC5O15440 1437 aa21.21■□□□□ 0.99
HMGA1P1-201ENST00000415560 SAMD9LQ8IVG5 1584 aa21.2■□□□□ 0.98
HMGA1P1-201ENST00000415560 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
HMGA1P1-201ENST00000415560 PTPRKQ15262 1439 aa21.2■□□□□ 0.98
HMGA1P1-201ENST00000415560 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.98
HMGA1P1-201ENST00000415560 CCER1Q8TC90 406 aaPredicted RBP21.19■□□□□ 0.98
HMGA1P1-201ENST00000415560 KIAA1107Q9UPP5 1409 aa21.19■□□□□ 0.98
HMGA1P1-201ENST00000415560 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
HMGA1P1-201ENST00000415560 ACIN1Q9UKV3 1341 aaKnown RBP21.18■□□□□ 0.98
HMGA1P1-201ENST00000415560 CD109Q6YHK3 1445 aa21.18■□□□□ 0.98
HMGA1P1-201ENST00000415560 ROCK1Q13464 1354 aa21.17■□□□□ 0.98
HMGA1P1-201ENST00000415560 HFM1A2PYH4 1435 aa21.16■□□□□ 0.98
HMGA1P1-201ENST00000415560 AKNAQ7Z591 1439 aa21.16■□□□□ 0.98
HMGA1P1-201ENST00000415560 GLI2P10070 1586 aa21.15■□□□□ 0.98
HMGA1P1-201ENST00000415560 CROCC2H7BZ55 1655 aa21.15■□□□□ 0.98
HMGA1P1-201ENST00000415560 FANCAO15360 1455 aa21.14■□□□□ 0.98
HMGA1P1-201ENST00000415560 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.98
HMGA1P1-201ENST00000415560 ADGBQ8N7X0 1667 aa21.14■□□□□ 0.97
HMGA1P1-201ENST00000415560 CFAP74Q9C0B2 1584 aa21.14■□□□□ 0.97
HMGA1P1-201ENST00000415560 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
HMGA1P1-201ENST00000415560 ZEB1P37275 1124 aaPredicted RBP21.13■□□□□ 0.97
HMGA1P1-201ENST00000415560 RRP7BPQ9NSQ0 103 aa21.13■□□□□ 0.97
HMGA1P1-201ENST00000415560 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
HMGA1P1-201ENST00000415560 SHANK2Q9UPX8 1470 aa21.13■□□□□ 0.97
HMGA1P1-201ENST00000415560 ANKRD30AQ9BXX3 1397 aa21.12■□□□□ 0.97
HMGA1P1-201ENST00000415560 SYCP2Q9BX26 1530 aa21.11■□□□□ 0.97
HMGA1P1-201ENST00000415560 FAM69CQ0P6D2 419 aa21.11■□□□□ 0.97
HMGA1P1-201ENST00000415560 NAIPQ13075 1403 aa21.11■□□□□ 0.97
HMGA1P1-201ENST00000415560 GCC2Q8IWJ2 1684 aa21.1■□□□□ 0.97
HMGA1P1-201ENST00000415560 ABCC1P33527 1531 aa21.09■□□□□ 0.97
HMGA1P1-201ENST00000415560 ADGRL2O95490 1459 aa21.08■□□□□ 0.97
HMGA1P1-201ENST00000415560 C9orf84Q5VXU9 1444 aa21.08■□□□□ 0.97
HMGA1P1-201ENST00000415560 MAP3K4Q9Y6R4 1608 aa21.07■□□□□ 0.96
HMGA1P1-201ENST00000415560 DIP2BQ9P265 1576 aa21.06■□□□□ 0.96
HMGA1P1-201ENST00000415560 NCOA1Q15788 1441 aa21.06■□□□□ 0.96
HMGA1P1-201ENST00000415560 ADGRL1O94910 1474 aa21.06■□□□□ 0.96
HMGA1P1-201ENST00000415560 NEO1Q92859 1461 aa21.05■□□□□ 0.96
HMGA1P1-201ENST00000415560 MAST1Q9Y2H9 1570 aa21.05■□□□□ 0.96
HMGA1P1-201ENST00000415560 SCAPERQ9BY12 1400 aa21.04■□□□□ 0.96
HMGA1P1-201ENST00000415560 ARHGEF12Q9NZN5 1544 aa21.03■□□□□ 0.96
HMGA1P1-201ENST00000415560 CLSPNQ9HAW4 1339 aa21.01■□□□□ 0.95
HMGA1P1-201ENST00000415560 SPAG9O60271 1321 aaKnown RBP21■□□□□ 0.95
HMGA1P1-201ENST00000415560 DHX57Q6P158 1386 aaKnown RBP20.99■□□□□ 0.95
HMGA1P1-201ENST00000415560 RTEL1-TNFRSF6BF6WH68 1400 aa20.99■□□□□ 0.95
HMGA1P1-201ENST00000415560 TRAPPC8Q9Y2L5 1435 aa20.99■□□□□ 0.95
HMGA1P1-201ENST00000415560 TRIM52Q96A61 297 aa20.98■□□□□ 0.95
HMGA1P1-201ENST00000415560 MYT1LQ9UL68 1186 aa20.98■□□□□ 0.95
HMGA1P1-201ENST00000415560 TEX14Q8IWB6 1497 aa20.98■□□□□ 0.95
HMGA1P1-201ENST00000415560 AFAP1Q8N556 730 aa20.97■□□□□ 0.95
HMGA1P1-201ENST00000415560 KIF13AQ9H1H9 1805 aa20.96■□□□□ 0.95
HMGA1P1-201ENST00000415560 KIF15Q9NS87 1388 aa20.96■□□□□ 0.95
HMGA1P1-201ENST00000415560 TSPOAP1O95153 1857 aa20.95■□□□□ 0.94
HMGA1P1-201ENST00000415560 PLXNC1O60486 1568 aa20.95■□□□□ 0.94
HMGA1P1-201ENST00000415560 ANKRD50Q9ULJ7 1429 aa20.95■□□□□ 0.94
HMGA1P1-201ENST00000415560 ZNF518AQ6AHZ1 1483 aa20.94■□□□□ 0.94
HMGA1P1-201ENST00000415560 DENND4BO75064 1496 aaPredicted RBP20.93■□□□□ 0.94
HMGA1P1-201ENST00000415560 DUOX2Q9NRD8 1548 aa20.9■□□□□ 0.94
HMGA1P1-201ENST00000415560 KDM6BO15054 1643 aa20.89■□□□□ 0.94
HMGA1P1-201ENST00000415560 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.94
HMGA1P1-201ENST00000415560 ATP7AQ04656 1500 aa20.88■□□□□ 0.93
HMGA1P1-201ENST00000415560 PPRC1Q5VV67 1664 aaKnown RBP20.86■□□□□ 0.93
HMGA1P1-201ENST00000415560 INO80Q9ULG1 1556 aaPredicted RBP20.86■□□□□ 0.93
HMGA1P1-201ENST00000415560 ZFYVE16Q7Z3T8 1539 aa20.86■□□□□ 0.93
HMGA1P1-201ENST00000415560 ERBINQ96RT1 1412 aa20.85■□□□□ 0.93
HMGA1P1-201ENST00000415560 KDM5CP41229 1560 aa20.85■□□□□ 0.93
HMGA1P1-201ENST00000415560 MLH3Q9UHC1 1453 aa20.84■□□□□ 0.93
HMGA1P1-201ENST00000415560 TRHP20396 242 aaPredicted RBP20.84■□□□□ 0.93
HMGA1P1-201ENST00000415560 MPHOSPH9Q99550 1183 aa20.84■□□□□ 0.93
HMGA1P1-201ENST00000415560 RAPGEF3O95398 923 aa20.82■□□□□ 0.92
HMGA1P1-201ENST00000415560 HECW2Q9P2P5 1572 aa20.81■□□□□ 0.92
HMGA1P1-201ENST00000415560 SLC4A1APQ9BWU0 796 aaKnown RBP20.81■□□□□ 0.92
HMGA1P1-201ENST00000415560 KIDINS220Q9ULH0 1771 aa20.81■□□□□ 0.92
HMGA1P1-201ENST00000415560 RICTORQ6R327 1708 aa20.81■□□□□ 0.92
HMGA1P1-201ENST00000415560 NUP155O75694 1391 aa20.79■□□□□ 0.92
HMGA1P1-201ENST00000415560 DHX29Q7Z478 1369 aaKnown RBP20.79■□□□□ 0.92
HMGA1P1-201ENST00000415560 MAGI2Q86UL8 1455 aa20.75■□□□□ 0.91
HMGA1P1-201ENST00000415560 EIF2AK4Q9P2K8 1649 aaKnown RBP20.75■□□□□ 0.91
HMGA1P1-201ENST00000415560 KDM5DQ9BY66 1539 aa20.74■□□□□ 0.91
HMGA1P1-201ENST00000415560 A2MP01023 1474 aa20.74■□□□□ 0.91
HMGA1P1-201ENST00000415560 UNC13BO14795 1591 aa20.73■□□□□ 0.91
HMGA1P1-201ENST00000415560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.73■□□□□ 0.91
HMGA1P1-201ENST00000415560 TIMELESSQ9UNS1 1208 aa20.72■□□□□ 0.91
HMGA1P1-201ENST00000415560 ZMYM4Q5VZL5 1548 aa20.72■□□□□ 0.91
HMGA1P1-201ENST00000415560 KANK1Q14678 1352 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms