RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 POGZQ7Z3K3 1410 aa20.48■□□□□ 0.87
NCKIPSD-203ENST00000415281 ZFYVE16Q7Z3T8 1539 aa20.48■□□□□ 0.87
NCKIPSD-203ENST00000415281 PCF11O94913 1555 aaKnown RBP20.47■□□□□ 0.87
NCKIPSD-203ENST00000415281 MAGI2Q86UL8 1455 aa20.47■□□□□ 0.87
NCKIPSD-203ENST00000415281 CDC42BPBQ9Y5S2 1711 aa20.47■□□□□ 0.87
NCKIPSD-203ENST00000415281 ARID4BQ4LE39 1312 aaPredicted RBP20.46■□□□□ 0.87
NCKIPSD-203ENST00000415281 CASKIN1Q8WXD9 1431 aa20.45■□□□□ 0.86
NCKIPSD-203ENST00000415281 RIMS1Q86UR5 1692 aaKnown RBP20.45■□□□□ 0.86
NCKIPSD-203ENST00000415281 EFCAB2Q5VUJ9 269 aa20.45■□□□□ 0.86
NCKIPSD-203ENST00000415281 CDK11AQ9UQ88 783 aaPredicted RBP20.43■□□□□ 0.86
NCKIPSD-203ENST00000415281 AFAP1Q8N556 730 aa20.4■□□□□ 0.86
NCKIPSD-203ENST00000415281 LMTK3Q96Q04 1460 aa20.4■□□□□ 0.86
NCKIPSD-203ENST00000415281 ARHGEF12Q9NZN5 1544 aa20.4■□□□□ 0.86
NCKIPSD-203ENST00000415281 KDM5CP41229 1560 aa20.39■□□□□ 0.85
NCKIPSD-203ENST00000415281 ATP10AO60312 1499 aa20.38■□□□□ 0.85
NCKIPSD-203ENST00000415281 ARHGAP5Q13017 1502 aa20.37■□□□□ 0.85
NCKIPSD-203ENST00000415281 PREX2Q70Z35 1606 aa20.37■□□□□ 0.85
NCKIPSD-203ENST00000415281 CDC42BPAQ5VT25 1732 aa20.36■□□□□ 0.85
NCKIPSD-203ENST00000415281 CLIP1P30622 1438 aa20.36■□□□□ 0.85
NCKIPSD-203ENST00000415281 CCDC18Q5T9S5 1454 aa20.35■□□□□ 0.85
NCKIPSD-203ENST00000415281 MLECQ14165 292 aa20.34■□□□□ 0.85
NCKIPSD-203ENST00000415281 ZNF518AQ6AHZ1 1483 aa20.34■□□□□ 0.85
NCKIPSD-203ENST00000415281 FYCO1Q9BQS8 1478 aa20.34■□□□□ 0.85
NCKIPSD-203ENST00000415281 TRAPPC8Q9Y2L5 1435 aa20.34■□□□□ 0.85
NCKIPSD-203ENST00000415281 FER1L4A9Z1Z3 1794 aa20.34■□□□□ 0.85
NCKIPSD-203ENST00000415281 C9orf84Q5VXU9 1444 aa20.32■□□□□ 0.84
NCKIPSD-203ENST00000415281 DIP2CQ9Y2E4 1556 aa20.32■□□□□ 0.84
NCKIPSD-203ENST00000415281 ITSN2Q9NZM3 1697 aa20.31■□□□□ 0.84
NCKIPSD-203ENST00000415281 ABCC1P33527 1531 aa20.31■□□□□ 0.84
NCKIPSD-203ENST00000415281 ABCA6Q8N139 1617 aa20.31■□□□□ 0.84
NCKIPSD-203ENST00000415281 MLH3Q9UHC1 1453 aa20.3■□□□□ 0.84
NCKIPSD-203ENST00000415281 KIDINS220Q9ULH0 1771 aa20.28■□□□□ 0.84
NCKIPSD-203ENST00000415281 GPATCH8Q9UKJ3 1502 aaKnown RBP20.27■□□□□ 0.84
NCKIPSD-203ENST00000415281 REREQ9P2R6 1566 aa20.27■□□□□ 0.84
NCKIPSD-203ENST00000415281 HSPA2P54652 639 aa20.27■□□□□ 0.84
NCKIPSD-203ENST00000415281 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
NCKIPSD-203ENST00000415281 SAMD9LQ8IVG5 1584 aa20.25■□□□□ 0.83
NCKIPSD-203ENST00000415281 CEBPAP49715 358 aaPredicted RBP20.25■□□□□ 0.83
NCKIPSD-203ENST00000415281 AGLP35573 1532 aa20.2■□□□□ 0.82
NCKIPSD-203ENST00000415281 HNRNPMP52272 730 aaKnown RBP eCLIP20.18■□□□□ 0.82
NCKIPSD-203ENST00000415281 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
NCKIPSD-203ENST00000415281 C3P01024 1663 aa20.16■□□□□ 0.82
NCKIPSD-203ENST00000415281 ZNF777Q9ULD5 760 aaPredicted RBP20.16■□□□□ 0.82
NCKIPSD-203ENST00000415281 PREX1Q8TCU6 1659 aa20.16■□□□□ 0.82
NCKIPSD-203ENST00000415281 MYT1LQ9UL68 1186 aa20.14■□□□□ 0.81
NCKIPSD-203ENST00000415281 STRCQ7RTU9 1775 aa20.13■□□□□ 0.81
NCKIPSD-203ENST00000415281 CEP162Q5TB80 1403 aa20.13■□□□□ 0.81
NCKIPSD-203ENST00000415281 KIAA1107Q9UPP5 1409 aa20.12■□□□□ 0.81
NCKIPSD-203ENST00000415281 ZNF644Q9H582 1327 aaPredicted RBP20.12■□□□□ 0.81
NCKIPSD-203ENST00000415281 FBXO41Q8TF61 875 aa20.12■□□□□ 0.81
NCKIPSD-203ENST00000415281 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
NCKIPSD-203ENST00000415281 SETD1BQ9UPS6 1966 aaKnown RBP20.12■□□□□ 0.81
NCKIPSD-203ENST00000415281 INO80Q9ULG1 1556 aaPredicted RBP20.1■□□□□ 0.81
NCKIPSD-203ENST00000415281 CFDP1Q9UEE9 299 aaPredicted RBP20.09■□□□□ 0.81
NCKIPSD-203ENST00000415281 MBD5Q9P267 1494 aa20.09■□□□□ 0.81
NCKIPSD-203ENST00000415281 MTUS2Q5JR59 1369 aa20.08■□□□□ 0.81
NCKIPSD-203ENST00000415281 CCNB3Q8WWL7 1395 aa20.08■□□□□ 0.81
NCKIPSD-203ENST00000415281 SPAG9O60271 1321 aaKnown RBP20.08■□□□□ 0.81
NCKIPSD-203ENST00000415281 SUPT6HQ7KZ85 1726 aaKnown RBP20.08■□□□□ 0.81
NCKIPSD-203ENST00000415281 ATP7AQ04656 1500 aa20.07■□□□□ 0.8
NCKIPSD-203ENST00000415281 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
NCKIPSD-203ENST00000415281 PLXNC1O60486 1568 aa20.07■□□□□ 0.8
NCKIPSD-203ENST00000415281 EHBP1L1Q8N3D4 1523 aa20.06■□□□□ 0.8
NCKIPSD-203ENST00000415281 PLEKHH2Q8IVE3 1493 aa20.05■□□□□ 0.8
NCKIPSD-203ENST00000415281 MROH2AA6NES4 1674 aa20.02■□□□□ 0.8
NCKIPSD-203ENST00000415281 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.79
NCKIPSD-203ENST00000415281 A2MP01023 1474 aa20.01■□□□□ 0.79
NCKIPSD-203ENST00000415281 ZMYM3Q14202 1370 aa19.99■□□□□ 0.79
NCKIPSD-203ENST00000415281 CLTCQ00610 1675 aaKnown RBP19.99■□□□□ 0.79
NCKIPSD-203ENST00000415281 CNTLNQ9NXG0 1405 aa19.99■□□□□ 0.79
NCKIPSD-203ENST00000415281 NCOA2Q15596 1464 aa19.99■□□□□ 0.79
NCKIPSD-203ENST00000415281 CERKQ8TCT0 537 aa19.98■□□□□ 0.79
NCKIPSD-203ENST00000415281 ADGBQ8N7X0 1667 aa19.97■□□□□ 0.79
NCKIPSD-203ENST00000415281 RTEL1-TNFRSF6BF6WH68 1400 aa19.94■□□□□ 0.78
NCKIPSD-203ENST00000415281 ESF1Q9H501 851 aaKnown RBP19.93■□□□□ 0.78
NCKIPSD-203ENST00000415281 NPATQ14207 1427 aa19.93■□□□□ 0.78
NCKIPSD-203ENST00000415281 GGT6Q6P531 493 aa19.92■□□□□ 0.78
NCKIPSD-203ENST00000415281 DHX29Q7Z478 1369 aaKnown RBP19.92■□□□□ 0.78
NCKIPSD-203ENST00000415281 PTPRKQ15262 1439 aa19.92■□□□□ 0.78
NCKIPSD-203ENST00000415281 VPS8Q8N3P4 1428 aa19.92■□□□□ 0.78
NCKIPSD-203ENST00000415281 CAMSAP2Q08AD1 1489 aa19.92■□□□□ 0.78
NCKIPSD-203ENST00000415281 KANK4Q5T7N3 995 aaPredicted RBP19.91■□□□□ 0.78
NCKIPSD-203ENST00000415281 PTPRTO14522 1441 aa19.91■□□□□ 0.78
NCKIPSD-203ENST00000415281 LRRC9Q6ZRR7 1453 aa19.91■□□□□ 0.78
NCKIPSD-203ENST00000415281 NCOA1Q15788 1441 aa19.9■□□□□ 0.78
NCKIPSD-203ENST00000415281 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
NCKIPSD-203ENST00000415281 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
NCKIPSD-203ENST00000415281 LTBP4Q8N2S1 1624 aa19.87■□□□□ 0.77
NCKIPSD-203ENST00000415281 CCDC141Q6ZP82 1450 aa19.87■□□□□ 0.77
NCKIPSD-203ENST00000415281 ARHGEF5Q12774 1597 aa19.87■□□□□ 0.77
NCKIPSD-203ENST00000415281 MYO3AQ8NEV4 1616 aa19.86■□□□□ 0.77
NCKIPSD-203ENST00000415281 ZNF142P52746 1687 aaPredicted RBP19.85■□□□□ 0.77
NCKIPSD-203ENST00000415281 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
NCKIPSD-203ENST00000415281 MAP3K1Q13233 1512 aa19.84■□□□□ 0.77
NCKIPSD-203ENST00000415281 RSPH4AQ5TD94 716 aa19.83■□□□□ 0.77
NCKIPSD-203ENST00000415281 NCKAP5LQ9HCH0 1330 aa19.82■□□□□ 0.76
NCKIPSD-203ENST00000415281 KIF3BO15066 747 aa19.81■□□□□ 0.76
NCKIPSD-203ENST00000415281 FBXO31Q5XUX0 539 aaPredicted RBP19.81■□□□□ 0.76
NCKIPSD-203ENST00000415281 CEP170BQ9Y4F5 1589 aaPredicted RBP19.81■□□□□ 0.76
NCKIPSD-203ENST00000415281 TCOF1Q13428 1488 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms