RNA–Protein interactions for RNA: ENST00000415082.1

SMIM2-IT1-201, SMIM2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMIM2-IT1, Length 478 nt, Biotype sense intronic.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM2-IT1-201ENST00000415082 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
SMIM2-IT1-201ENST00000415082 KIF3CO14782 793 aa12.41□□□□□ -0.42
SMIM2-IT1-201ENST00000415082 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
SMIM2-IT1-201ENST00000415082 MFSD10Q14728 455 aa12.38□□□□□ -0.43
SMIM2-IT1-201ENST00000415082 GPHNQ9NQX3 736 aaPredicted RBP12.38□□□□□ -0.43
SMIM2-IT1-201ENST00000415082 C2orf72A6NCS6 295 aa12.37□□□□□ -0.43
SMIM2-IT1-201ENST00000415082 PDE4AP27815 886 aa12.36□□□□□ -0.43
SMIM2-IT1-201ENST00000415082 DSG2Q14126 1118 aa12.34□□□□□ -0.43
SMIM2-IT1-201ENST00000415082 G3V3G9 751 aa12.31□□□□□ -0.44
SMIM2-IT1-201ENST00000415082 DDX27Q96GQ7 796 aaKnown RBP12.29□□□□□ -0.44
SMIM2-IT1-201ENST00000415082 FOXK1P85037 733 aa12.28□□□□□ -0.44
SMIM2-IT1-201ENST00000415082 KCNV2Q8TDN2 545 aa12.28□□□□□ -0.44
SMIM2-IT1-201ENST00000415082 PPP1R15BQ5SWA1 713 aa12.27□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 TMC2Q8TDI7 906 aa12.27□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 CAMK2BQ13554 666 aa12.26□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 C3orf67Q6ZVT6 689 aa12.26□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 PLPP6Q8IY26 295 aa12.25□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 WDR70Q9NW82 654 aa12.25□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.25□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 EMILIN3Q9NT22 766 aa12.24□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 E2F4Q16254 413 aa12.23□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 LHX8Q68G74 356 aa12.23□□□□□ -0.45
SMIM2-IT1-201ENST00000415082 SLAIN1Q8ND83 568 aa12.17□□□□□ -0.46
SMIM2-IT1-201ENST00000415082 HOXB3P14651 431 aaPredicted RBP12.13□□□□□ -0.47
SMIM2-IT1-201ENST00000415082 MAMSTRQ6ZN01 415 aa12.13□□□□□ -0.47
SMIM2-IT1-201ENST00000415082 SCUBE2Q9NQ36 999 aa12.13□□□□□ -0.47
SMIM2-IT1-201ENST00000415082 ARIH1Q9Y4X5 557 aaPredicted RBP12.13□□□□□ -0.47
SMIM2-IT1-201ENST00000415082 ARHGEF1Q92888 912 aaKnown RBP12.12□□□□□ -0.47
SMIM2-IT1-201ENST00000415082 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
SMIM2-IT1-201ENST00000415082 DPYSL4O14531 572 aa12.1□□□□□ -0.47
SMIM2-IT1-201ENST00000415082 P3H3Q8IVL6 736 aa12.09□□□□□ -0.47
SMIM2-IT1-201ENST00000415082 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMIM2-IT1-201ENST00000415082 SLC34A2O95436 690 aa12.07□□□□□ -0.48
SMIM2-IT1-201ENST00000415082 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
SMIM2-IT1-201ENST00000415082 BCANQ96GW7 911 aa12.05□□□□□ -0.48
SMIM2-IT1-201ENST00000415082 SEMA3EO15041 775 aa12.04□□□□□ -0.48
SMIM2-IT1-201ENST00000415082 KHSRPQ92945 711 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMIM2-IT1-201ENST00000415082 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
SMIM2-IT1-201ENST00000415082 PCDHGA4Q9Y5G9 962 aa12□□□□□ -0.49
SMIM2-IT1-201ENST00000415082 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
SMIM2-IT1-201ENST00000415082 PDIA6Q15084 440 aa11.99□□□□□ -0.49
SMIM2-IT1-201ENST00000415082 GPR153Q6NV75 609 aa11.99□□□□□ -0.49
SMIM2-IT1-201ENST00000415082 MAP3K9P80192 1104 aa11.98□□□□□ -0.49
SMIM2-IT1-201ENST00000415082 TESPA1A2RU30 521 aaPredicted RBP11.97□□□□□ -0.49
SMIM2-IT1-201ENST00000415082 ARSIQ5FYB1 569 aa11.97□□□□□ -0.49
SMIM2-IT1-201ENST00000415082 NBR1Q14596 966 aa11.96□□□□□ -0.49
SMIM2-IT1-201ENST00000415082 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
SMIM2-IT1-201ENST00000415082 EVI5O60447 810 aa11.94□□□□□ -0.5
SMIM2-IT1-201ENST00000415082 DOK7Q18PE1 504 aa11.93□□□□□ -0.5
SMIM2-IT1-201ENST00000415082 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
SMIM2-IT1-201ENST00000415082 PRIM1P49642 420 aaKnown RBP11.91□□□□□ -0.5
SMIM2-IT1-201ENST00000415082 NUDT7P0C024 238 aa11.9□□□□□ -0.5
SMIM2-IT1-201ENST00000415082 LCE2DQ5TA82 110 aaPredicted RBP11.9□□□□□ -0.5
SMIM2-IT1-201ENST00000415082 PTGER2P43116 358 aa11.89□□□□□ -0.51
SMIM2-IT1-201ENST00000415082 TBC1D12O60347 775 aa11.88□□□□□ -0.51
SMIM2-IT1-201ENST00000415082 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMIM2-IT1-201ENST00000415082 DDX12PQ92771 950 aa11.87□□□□□ -0.51
SMIM2-IT1-201ENST00000415082 ZSWIM6Q9HCJ5 1215 aa11.87□□□□□ -0.51
SMIM2-IT1-201ENST00000415082 ST18O60284 1047 aa11.86□□□□□ -0.51
SMIM2-IT1-201ENST00000415082 HOXB1P14653 301 aaPredicted RBP11.86□□□□□ -0.51
SMIM2-IT1-201ENST00000415082 SNPHO15079 494 aa11.85□□□□□ -0.51
SMIM2-IT1-201ENST00000415082 ZNF710Q8N1W2 664 aa11.85□□□□□ -0.51
SMIM2-IT1-201ENST00000415082 OSBPP22059 807 aa11.84□□□□□ -0.51
SMIM2-IT1-201ENST00000415082 GRXCR2A6NFK2 248 aa11.83□□□□□ -0.52
SMIM2-IT1-201ENST00000415082 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
SMIM2-IT1-201ENST00000415082 LHX6Q9UPM6 363 aa11.82□□□□□ -0.52
SMIM2-IT1-201ENST00000415082 PCDHGA10Q9Y5H3 936 aa11.82□□□□□ -0.52
SMIM2-IT1-201ENST00000415082 PRKCSHP14314 528 aaPredicted RBP11.81□□□□□ -0.52
SMIM2-IT1-201ENST00000415082 RIMBP2O15034 1052 aa11.8□□□□□ -0.52
SMIM2-IT1-201ENST00000415082 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
SMIM2-IT1-201ENST00000415082 LMOD2Q6P5Q4 547 aa11.79□□□□□ -0.52
SMIM2-IT1-201ENST00000415082 FOSBP53539 338 aa11.78□□□□□ -0.52
SMIM2-IT1-201ENST00000415082 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
SMIM2-IT1-201ENST00000415082 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
SMIM2-IT1-201ENST00000415082 MARVELD3Q96A59 401 aa11.77□□□□□ -0.53
SMIM2-IT1-201ENST00000415082 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
SMIM2-IT1-201ENST00000415082 PHF14O94880 888 aa11.74□□□□□ -0.53
SMIM2-IT1-201ENST00000415082 JPH4Q96JJ6 628 aa11.74□□□□□ -0.53
SMIM2-IT1-201ENST00000415082 GPR37O15354 613 aa11.72□□□□□ -0.53
SMIM2-IT1-201ENST00000415082 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
SMIM2-IT1-201ENST00000415082 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
SMIM2-IT1-201ENST00000415082 ADAM33Q9BZ11 813 aa11.71□□□□□ -0.53
SMIM2-IT1-201ENST00000415082 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 SMYD5Q6GMV2 418 aa11.7□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 RBM33Q96EV2 1170 aaKnown RBP11.7□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 EPAS1Q99814 870 aa11.68□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 ZDHHC16Q969W1 377 aa11.66□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 EMP3P54852 163 aa11.65□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 VARS2Q5ST30 1063 aaKnown RBP11.65□□□□□ -0.54
SMIM2-IT1-201ENST00000415082 FAM205CA6NFA0 338 aa11.64□□□□□ -0.55
SMIM2-IT1-201ENST00000415082 ERBB3P21860 1342 aa11.63□□□□□ -0.55
SMIM2-IT1-201ENST00000415082 NUTM2FA1L443 756 aa11.63□□□□□ -0.55
SMIM2-IT1-201ENST00000415082 C6orf132Q5T0Z8 1188 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms