RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CFAP44Q96MT7 982 aa9.93□□□□□ -0.82
HMGB3P23-201ENST00000414981 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
HMGB3P23-201ENST00000414981 C2orf72A6NCS6 295 aa9.9□□□□□ -0.82
HMGB3P23-201ENST00000414981 GPHNQ9NQX3 736 aaPredicted RBP9.9□□□□□ -0.82
HMGB3P23-201ENST00000414981 PDE4AP27815 886 aa9.89□□□□□ -0.83
HMGB3P23-201ENST00000414981 FAM163AQ96GL9 167 aaPredicted RBP9.87□□□□□ -0.83
HMGB3P23-201ENST00000414981 CRISPLD2Q9H0B8 497 aa9.86□□□□□ -0.83
HMGB3P23-201ENST00000414981 FOXK1P85037 733 aa9.85□□□□□ -0.83
HMGB3P23-201ENST00000414981 DOK7Q18PE1 504 aa9.85□□□□□ -0.83
HMGB3P23-201ENST00000414981 HOXB3P14651 431 aaPredicted RBP9.84□□□□□ -0.83
HMGB3P23-201ENST00000414981 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
HMGB3P23-201ENST00000414981 CADPS2Q86UW7 1296 aa9.82□□□□□ -0.84
HMGB3P23-201ENST00000414981 ST18O60284 1047 aa9.81□□□□□ -0.84
HMGB3P23-201ENST00000414981 SLC34A2O95436 690 aa9.81□□□□□ -0.84
HMGB3P23-201ENST00000414981 PLCB2Q00722 1185 aa9.81□□□□□ -0.84
HMGB3P23-201ENST00000414981 RIMBP2O15034 1052 aa9.8□□□□□ -0.84
HMGB3P23-201ENST00000414981 DSG2Q14126 1118 aa9.8□□□□□ -0.84
HMGB3P23-201ENST00000414981 LARP6Q9BRS8 491 aaKnown RBP9.8□□□□□ -0.84
HMGB3P23-201ENST00000414981 ZSWIM6Q9HCJ5 1215 aa9.8□□□□□ -0.84
HMGB3P23-201ENST00000414981 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
HMGB3P23-201ENST00000414981 PLPP6Q8IY26 295 aa9.79□□□□□ -0.84
HMGB3P23-201ENST00000414981 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
HMGB3P23-201ENST00000414981 MFSD10Q14728 455 aa9.78□□□□□ -0.84
HMGB3P23-201ENST00000414981 PPP1R15BQ5SWA1 713 aa9.76□□□□□ -0.85
HMGB3P23-201ENST00000414981 DDX27Q96GQ7 796 aaKnown RBP9.76□□□□□ -0.85
HMGB3P23-201ENST00000414981 HOXB1P14653 301 aaPredicted RBP9.75□□□□□ -0.85
HMGB3P23-201ENST00000414981 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
HMGB3P23-201ENST00000414981 GPR153Q6NV75 609 aa9.74□□□□□ -0.85
HMGB3P23-201ENST00000414981 PTCD2Q8WV60 388 aaKnown RBP9.73□□□□□ -0.85
HMGB3P23-201ENST00000414981 TBC1D12O60347 775 aa9.7□□□□□ -0.86
HMGB3P23-201ENST00000414981 ARSIQ5FYB1 569 aa9.7□□□□□ -0.86
HMGB3P23-201ENST00000414981 PCDHGA4Q9Y5G9 962 aa9.7□□□□□ -0.86
HMGB3P23-201ENST00000414981 POTEMA6NI47 508 aa9.68□□□□□ -0.86
HMGB3P23-201ENST00000414981 POTEGQ6S5H5 508 aa9.68□□□□□ -0.86
HMGB3P23-201ENST00000414981 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
HMGB3P23-201ENST00000414981 WDR70Q9NW82 654 aa9.68□□□□□ -0.86
HMGB3P23-201ENST00000414981 CAMK2BQ13554 666 aa9.67□□□□□ -0.86
HMGB3P23-201ENST00000414981 MARVELD3Q96A59 401 aa9.66□□□□□ -0.86
HMGB3P23-201ENST00000414981 EMP3P54852 163 aa9.65□□□□□ -0.86
HMGB3P23-201ENST00000414981 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
HMGB3P23-201ENST00000414981 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.87
HMGB3P23-201ENST00000414981 PCDH10Q9P2E7 1040 aa9.63□□□□□ -0.87
HMGB3P23-201ENST00000414981 HAP1P54257 671 aaPredicted RBP9.62□□□□□ -0.87
HMGB3P23-201ENST00000414981 E2F4Q16254 413 aa9.62□□□□□ -0.87
HMGB3P23-201ENST00000414981 EMILIN3Q9NT22 766 aa9.62□□□□□ -0.87
HMGB3P23-201ENST00000414981 NUDT7P0C024 238 aa9.61□□□□□ -0.87
HMGB3P23-201ENST00000414981 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
HMGB3P23-201ENST00000414981 ERBB3P21860 1342 aa9.6□□□□□ -0.87
HMGB3P23-201ENST00000414981 FAM205CA6NFA0 338 aa9.6□□□□□ -0.87
HMGB3P23-201ENST00000414981 ZNF316A6NFI3 1004 aaPredicted RBP9.6□□□□□ -0.87
HMGB3P23-201ENST00000414981 UPF1Q92900 1129 aaKnown RBP eCLIP9.6□□□□□ -0.87
HMGB3P23-201ENST00000414981 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
HMGB3P23-201ENST00000414981 ARIH1Q9Y4X5 557 aaPredicted RBP9.59□□□□□ -0.87
HMGB3P23-201ENST00000414981 HS3ST6Q96QI5 342 aa9.58□□□□□ -0.88
HMGB3P23-201ENST00000414981 LHX6Q9UPM6 363 aa9.57□□□□□ -0.88
HMGB3P23-201ENST00000414981 POTEB3A0JP26 581 aa9.56□□□□□ -0.88
HMGB3P23-201ENST00000414981 PSDA5PKW4 1024 aaPredicted RBP9.56□□□□□ -0.88
HMGB3P23-201ENST00000414981 POTEBQ6S5H4 581 aa9.56□□□□□ -0.88
HMGB3P23-201ENST00000414981 EVI5O60447 810 aa9.55□□□□□ -0.88
HMGB3P23-201ENST00000414981 VSIG10Q8N0Z9 540 aa9.55□□□□□ -0.88
HMGB3P23-201ENST00000414981 VARS2Q5ST30 1063 aaKnown RBP9.54□□□□□ -0.88
HMGB3P23-201ENST00000414981 CDAN1Q8IWY9 1227 aa9.53□□□□□ -0.88
HMGB3P23-201ENST00000414981 ZNF687Q8N1G0 1237 aa9.53□□□□□ -0.88
HMGB3P23-201ENST00000414981 DPYSL4O14531 572 aa9.52□□□□□ -0.89
HMGB3P23-201ENST00000414981 SPDYE16A6NNV3 312 aaPredicted RBP9.51□□□□□ -0.89
HMGB3P23-201ENST00000414981 KDM2AQ9Y2K7 1162 aa9.51□□□□□ -0.89
HMGB3P23-201ENST00000414981 ARHGEF1Q92888 912 aaKnown RBP9.5□□□□□ -0.89
HMGB3P23-201ENST00000414981 PTGER2P43116 358 aa9.49□□□□□ -0.89
HMGB3P23-201ENST00000414981 P3H3Q8IVL6 736 aa9.48□□□□□ -0.89
HMGB3P23-201ENST00000414981 FOSBP53539 338 aa9.47□□□□□ -0.89
HMGB3P23-201ENST00000414981 PDIA6Q15084 440 aa9.47□□□□□ -0.89
HMGB3P23-201ENST00000414981 PPP4R3BQ5MIZ7 849 aa9.47□□□□□ -0.89
HMGB3P23-201ENST00000414981 JPH4Q96JJ6 628 aa9.46□□□□□ -0.9
HMGB3P23-201ENST00000414981 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
HMGB3P23-201ENST00000414981 PHF14O94880 888 aa9.44□□□□□ -0.9
HMGB3P23-201ENST00000414981 PBX2P40425 430 aa9.44□□□□□ -0.9
HMGB3P23-201ENST00000414981 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
HMGB3P23-201ENST00000414981 EPAS1Q99814 870 aa9.42□□□□□ -0.9
HMGB3P23-201ENST00000414981 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
HMGB3P23-201ENST00000414981 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
HMGB3P23-201ENST00000414981 ARHGAP33O14559 1287 aa9.41□□□□□ -0.9
HMGB3P23-201ENST00000414981 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
HMGB3P23-201ENST00000414981 PCDHGA10Q9Y5H3 936 aa9.41□□□□□ -0.9
HMGB3P23-201ENST00000414981 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
HMGB3P23-201ENST00000414981 BCL2L12Q9HB09 334 aa9.4□□□□□ -0.9
HMGB3P23-201ENST00000414981 TYW1BQ6NUM6 668 aa9.39□□□□□ -0.91
HMGB3P23-201ENST00000414981 POTEEQ6S8J3 1075 aa9.39□□□□□ -0.91
HMGB3P23-201ENST00000414981 DDX12PQ92771 950 aa9.37□□□□□ -0.91
HMGB3P23-201ENST00000414981 ADAM33Q9BZ11 813 aa9.36□□□□□ -0.91
HMGB3P23-201ENST00000414981 PTPREP23469 700 aa9.35□□□□□ -0.91
HMGB3P23-201ENST00000414981 KCNH8Q96L42 1107 aa9.35□□□□□ -0.91
HMGB3P23-201ENST00000414981 AXIN2Q9Y2T1 843 aa9.35□□□□□ -0.91
HMGB3P23-201ENST00000414981 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGB3P23-201ENST00000414981 GRXCR2A6NFK2 248 aa9.33□□□□□ -0.92
HMGB3P23-201ENST00000414981 PSEN2P49810 448 aa9.33□□□□□ -0.92
HMGB3P23-201ENST00000414981 OSBPP22059 807 aa9.32□□□□□ -0.92
HMGB3P23-201ENST00000414981 C6orf132Q5T0Z8 1188 aa9.32□□□□□ -0.92
HMGB3P23-201ENST00000414981 SLC4A5Q9BY07 1137 aa9.32□□□□□ -0.92
HMGB3P23-201ENST00000414981 TK2O00142 265 aa9.31□□□□□ -0.92
HMGB3P23-201ENST00000414981 NBR1Q14596 966 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms