RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 TRHP20396 242 aaPredicted RBP20.26■□□□□ 0.83
CNOT4-204ENST00000414802 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
CNOT4-204ENST00000414802 PLCH2O75038 1416 aa20.23■□□□□ 0.83
CNOT4-204ENST00000414802 ARAP3Q8WWN8 1544 aa20.23■□□□□ 0.83
CNOT4-204ENST00000414802 SAMD9LQ8IVG5 1584 aa20.23■□□□□ 0.83
CNOT4-204ENST00000414802 CFAP74Q9C0B2 1584 aa20.22■□□□□ 0.83
CNOT4-204ENST00000414802 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
CNOT4-204ENST00000414802 FANCAO15360 1455 aa20.19■□□□□ 0.82
CNOT4-204ENST00000414802 CAMSAP2Q08AD1 1489 aa20.19■□□□□ 0.82
CNOT4-204ENST00000414802 CFDP1Q9UEE9 299 aaPredicted RBP20.18■□□□□ 0.82
CNOT4-204ENST00000414802 ZNF777Q9ULD5 760 aaPredicted RBP20.17■□□□□ 0.82
CNOT4-204ENST00000414802 MIA2Q96PC5 1412 aa20.17■□□□□ 0.82
CNOT4-204ENST00000414802 ABCC1P33527 1531 aa20.16■□□□□ 0.82
CNOT4-204ENST00000414802 ZNF644Q9H582 1327 aaPredicted RBP20.15■□□□□ 0.82
CNOT4-204ENST00000414802 SYCP2Q9BX26 1530 aa20.15■□□□□ 0.82
CNOT4-204ENST00000414802 TEX14Q8IWB6 1497 aa20.15■□□□□ 0.82
CNOT4-204ENST00000414802 TCOF1Q13428 1488 aaKnown RBP20.14■□□□□ 0.81
CNOT4-204ENST00000414802 RRBP1Q9P2E9 1410 aaKnown RBP20.14■□□□□ 0.81
CNOT4-204ENST00000414802 NEO1Q92859 1461 aa20.12■□□□□ 0.81
CNOT4-204ENST00000414802 EFCAB2Q5VUJ9 269 aa20.12■□□□□ 0.81
CNOT4-204ENST00000414802 ADGRL1O94910 1474 aa20.11■□□□□ 0.81
CNOT4-204ENST00000414802 AKNAQ7Z591 1439 aa20.11■□□□□ 0.81
CNOT4-204ENST00000414802 CROCC2H7BZ55 1655 aa20.11■□□□□ 0.81
CNOT4-204ENST00000414802 FAM50AQ14320 339 aaKnown RBP20.1■□□□□ 0.81
CNOT4-204ENST00000414802 ARHGEF12Q9NZN5 1544 aa20.1■□□□□ 0.81
CNOT4-204ENST00000414802 RICTORQ6R327 1708 aa20.09■□□□□ 0.81
CNOT4-204ENST00000414802 DNMT1P26358 1616 aaKnown RBP20.09■□□□□ 0.81
CNOT4-204ENST00000414802 PLEKHH2Q8IVE3 1493 aa20.07■□□□□ 0.8
CNOT4-204ENST00000414802 ARHGEF5Q12774 1597 aa20.06■□□□□ 0.8
CNOT4-204ENST00000414802 FRMPD1Q5SYB0 1578 aa20.05■□□□□ 0.8
CNOT4-204ENST00000414802 SCAPERQ9BY12 1400 aa20.05■□□□□ 0.8
CNOT4-204ENST00000414802 MBD5Q9P267 1494 aa20.04■□□□□ 0.8
CNOT4-204ENST00000414802 HNRNPMP52272 730 aaKnown RBP eCLIP20.03■□□□□ 0.8
CNOT4-204ENST00000414802 TRAPPC8Q9Y2L5 1435 aa20.03■□□□□ 0.8
CNOT4-204ENST00000414802 KDM6BO15054 1643 aa20.02■□□□□ 0.8
CNOT4-204ENST00000414802 KIAA1107Q9UPP5 1409 aa20.02■□□□□ 0.79
CNOT4-204ENST00000414802 CCDC141Q6ZP82 1450 aa20.02■□□□□ 0.79
CNOT4-204ENST00000414802 ADGBQ8N7X0 1667 aa20.01■□□□□ 0.79
CNOT4-204ENST00000414802 POGZQ7Z3K3 1410 aa20.01■□□□□ 0.79
CNOT4-204ENST00000414802 DAPK1P53355 1430 aa20■□□□□ 0.79
CNOT4-204ENST00000414802 DENND4BO75064 1496 aaPredicted RBP20■□□□□ 0.79
CNOT4-204ENST00000414802 ITGAEP38570 1179 aa20■□□□□ 0.79
CNOT4-204ENST00000414802 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20■□□□□ 0.79
CNOT4-204ENST00000414802 COL17A1Q9UMD9 1497 aaPredicted RBP20■□□□□ 0.79
CNOT4-204ENST00000414802 KDM5CP41229 1560 aa19.98■□□□□ 0.79
CNOT4-204ENST00000414802 ABCC5O15440 1437 aa19.98■□□□□ 0.79
CNOT4-204ENST00000414802 ZNF518AQ6AHZ1 1483 aa19.97■□□□□ 0.79
CNOT4-204ENST00000414802 INO80Q9ULG1 1556 aaPredicted RBP19.97■□□□□ 0.79
CNOT4-204ENST00000414802 PTPRKQ15262 1439 aa19.96■□□□□ 0.79
CNOT4-204ENST00000414802 HECW2Q9P2P5 1572 aa19.96■□□□□ 0.79
CNOT4-204ENST00000414802 RAPGEF3O95398 923 aa19.96■□□□□ 0.79
CNOT4-204ENST00000414802 KIDINS220Q9ULH0 1771 aa19.95■□□□□ 0.78
CNOT4-204ENST00000414802 MAST1Q9Y2H9 1570 aa19.95■□□□□ 0.78
CNOT4-204ENST00000414802 ZFYVE16Q7Z3T8 1539 aa19.95■□□□□ 0.78
CNOT4-204ENST00000414802 SHANK2Q9UPX8 1470 aa19.94■□□□□ 0.78
CNOT4-204ENST00000414802 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
CNOT4-204ENST00000414802 TRIM26Q12899 539 aaPredicted RBP19.94■□□□□ 0.78
CNOT4-204ENST00000414802 C9orf84Q5VXU9 1444 aa19.93■□□□□ 0.78
CNOT4-204ENST00000414802 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
CNOT4-204ENST00000414802 ZMYM4Q5VZL5 1548 aa19.93■□□□□ 0.78
CNOT4-204ENST00000414802 ABCA6Q8N139 1617 aa19.91■□□□□ 0.78
CNOT4-204ENST00000414802 CHIC2Q9UKJ5 165 aa19.91■□□□□ 0.78
CNOT4-204ENST00000414802 PLXNC1O60486 1568 aa19.89■□□□□ 0.77
CNOT4-204ENST00000414802 GCC2Q8IWJ2 1684 aa19.88■□□□□ 0.77
CNOT4-204ENST00000414802 SPAG9O60271 1321 aaKnown RBP19.88■□□□□ 0.77
CNOT4-204ENST00000414802 RSPH4AQ5TD94 716 aa19.87■□□□□ 0.77
CNOT4-204ENST00000414802 DIP2CQ9Y2E4 1556 aa19.87■□□□□ 0.77
CNOT4-204ENST00000414802 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
CNOT4-204ENST00000414802 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
CNOT4-204ENST00000414802 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
CNOT4-204ENST00000414802 MYT1LQ9UL68 1186 aa19.86■□□□□ 0.77
CNOT4-204ENST00000414802 ARHGEF40Q8TER5 1519 aa19.86■□□□□ 0.77
CNOT4-204ENST00000414802 MLH3Q9UHC1 1453 aa19.85■□□□□ 0.77
CNOT4-204ENST00000414802 YEATS2Q9ULM3 1422 aa19.84■□□□□ 0.77
CNOT4-204ENST00000414802 RTEL1-TNFRSF6BF6WH68 1400 aa19.83■□□□□ 0.76
CNOT4-204ENST00000414802 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
CNOT4-204ENST00000414802 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
CNOT4-204ENST00000414802 ANKRD30AQ9BXX3 1397 aa19.81■□□□□ 0.76
CNOT4-204ENST00000414802 NCOA1Q15788 1441 aa19.81■□□□□ 0.76
CNOT4-204ENST00000414802 SIGLEC1Q9BZZ2 1709 aa19.8■□□□□ 0.76
CNOT4-204ENST00000414802 MAGI2Q86UL8 1455 aa19.79■□□□□ 0.76
CNOT4-204ENST00000414802 ROCK1Q13464 1354 aa19.79■□□□□ 0.76
CNOT4-204ENST00000414802 KIF15Q9NS87 1388 aa19.79■□□□□ 0.76
CNOT4-204ENST00000414802 DUOX2Q9NRD8 1548 aa19.76■□□□□ 0.75
CNOT4-204ENST00000414802 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
CNOT4-204ENST00000414802 NAIPQ13075 1403 aa19.76■□□□□ 0.75
CNOT4-204ENST00000414802 A2MP01023 1474 aa19.74■□□□□ 0.75
CNOT4-204ENST00000414802 ATP10AO60312 1499 aa19.73■□□□□ 0.75
CNOT4-204ENST00000414802 EIF2AK4Q9P2K8 1649 aaKnown RBP19.72■□□□□ 0.75
CNOT4-204ENST00000414802 REREQ9P2R6 1566 aa19.71■□□□□ 0.75
CNOT4-204ENST00000414802 ANKRD50Q9ULJ7 1429 aa19.7■□□□□ 0.74
CNOT4-204ENST00000414802 BCORL1Q5H9F3 1711 aa19.69■□□□□ 0.74
CNOT4-204ENST00000414802 ERBINQ96RT1 1412 aa19.69■□□□□ 0.74
CNOT4-204ENST00000414802 SETD5Q9C0A6 1442 aa19.68■□□□□ 0.74
CNOT4-204ENST00000414802 DHX29Q7Z478 1369 aaKnown RBP19.68■□□□□ 0.74
CNOT4-204ENST00000414802 RNF17Q9BXT8 1623 aaKnown RBP19.66■□□□□ 0.74
CNOT4-204ENST00000414802 RAB3GAP2Q9H2M9 1393 aa19.66■□□□□ 0.74
CNOT4-204ENST00000414802 DEPDC5O75140 1603 aa19.66■□□□□ 0.74
CNOT4-204ENST00000414802 UNC13BO14795 1591 aa19.65■□□□□ 0.74
CNOT4-204ENST00000414802 MROH1Q8NDA8 1641 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms