RNA–Protein interactions for RNA: ENST00000413787.1

SLC6A8-202, Transcript of solute carrier family 6 member 8, humanhuman

TSL 5

Gene SLC6A8, Length 468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-202ENST00000413787 CDC42BPBQ9Y5S2 1711 aa28.8■■■□□ 2.2
SLC6A8-202ENST00000413787 ZMYM4Q5VZL5 1548 aa28.79■■■□□ 2.2
SLC6A8-202ENST00000413787 PREX2Q70Z35 1606 aa28.77■■■□□ 2.2
SLC6A8-202ENST00000413787 POGZQ7Z3K3 1410 aa28.77■■■□□ 2.2
SLC6A8-202ENST00000413787 ARHGEF40Q8TER5 1519 aa28.76■■■□□ 2.19
SLC6A8-202ENST00000413787 CDC42BPAQ5VT25 1732 aa28.74■■■□□ 2.19
SLC6A8-202ENST00000413787 MAGI2Q86UL8 1455 aa28.71■■■□□ 2.19
SLC6A8-202ENST00000413787 MTUS2Q5JR59 1369 aa28.7■■■□□ 2.18
SLC6A8-202ENST00000413787 ZFYVE16Q7Z3T8 1539 aa28.69■■■□□ 2.18
SLC6A8-202ENST00000413787 YEATS2Q9ULM3 1422 aa28.68■■■□□ 2.18
SLC6A8-202ENST00000413787 ZNF518AQ6AHZ1 1483 aa28.66■■■□□ 2.18
SLC6A8-202ENST00000413787 VPS8Q8N3P4 1428 aa28.65■■■□□ 2.18
SLC6A8-202ENST00000413787 GPATCH8Q9UKJ3 1502 aaKnown RBP28.64■■■□□ 2.18
SLC6A8-202ENST00000413787 ARID4BQ4LE39 1312 aaPredicted RBP28.64■■■□□ 2.17
SLC6A8-202ENST00000413787 ABCC1P33527 1531 aa28.64■■■□□ 2.17
SLC6A8-202ENST00000413787 EHBP1L1Q8N3D4 1523 aa28.64■■■□□ 2.17
SLC6A8-202ENST00000413787 ADAMTSL3P82987 1691 aa28.62■■■□□ 2.17
SLC6A8-202ENST00000413787 AFAP1Q8N556 730 aa28.62■■■□□ 2.17
SLC6A8-202ENST00000413787 BCORL1Q5H9F3 1711 aa28.62■■■□□ 2.17
SLC6A8-202ENST00000413787 KDM5CP41229 1560 aa28.62■■■□□ 2.17
SLC6A8-202ENST00000413787 ARHGEF12Q9NZN5 1544 aa28.6■■■□□ 2.17
SLC6A8-202ENST00000413787 ITSN2Q9NZM3 1697 aa28.6■■■□□ 2.17
SLC6A8-202ENST00000413787 CCNB3Q8WWL7 1395 aa28.6■■■□□ 2.17
SLC6A8-202ENST00000413787 SIGLEC1Q9BZZ2 1709 aa28.57■■■□□ 2.16
SLC6A8-202ENST00000413787 TRAPPC8Q9Y2L5 1435 aa28.57■■■□□ 2.16
SLC6A8-202ENST00000413787 TIAM1Q13009 1591 aa28.57■■■□□ 2.16
SLC6A8-202ENST00000413787 SAMD9LQ8IVG5 1584 aa28.57■■■□□ 2.16
SLC6A8-202ENST00000413787 ZNF777Q9ULD5 760 aaPredicted RBP28.56■■■□□ 2.16
SLC6A8-202ENST00000413787 ATP10AO60312 1499 aa28.55■■■□□ 2.16
SLC6A8-202ENST00000413787 HECW2Q9P2P5 1572 aa28.54■■■□□ 2.16
SLC6A8-202ENST00000413787 CFDP1Q9UEE9 299 aaPredicted RBP28.54■■■□□ 2.16
SLC6A8-202ENST00000413787 MLH3Q9UHC1 1453 aa28.52■■■□□ 2.16
SLC6A8-202ENST00000413787 MADDQ8WXG6 1647 aa28.51■■■□□ 2.15
SLC6A8-202ENST00000413787 C9orf84Q5VXU9 1444 aa28.51■■■□□ 2.15
SLC6A8-202ENST00000413787 SYCP2Q9BX26 1530 aa28.5■■■□□ 2.15
SLC6A8-202ENST00000413787 SUPT6HQ7KZ85 1726 aaKnown RBP28.49■■■□□ 2.15
SLC6A8-202ENST00000413787 MYT1LQ9UL68 1186 aa28.49■■■□□ 2.15
SLC6A8-202ENST00000413787 PTPRMP28827 1452 aa28.48■■■□□ 2.15
SLC6A8-202ENST00000413787 PLEKHH2Q8IVE3 1493 aa28.48■■■□□ 2.15
SLC6A8-202ENST00000413787 DIP2CQ9Y2E4 1556 aa28.47■■■□□ 2.15
SLC6A8-202ENST00000413787 KIAA1107Q9UPP5 1409 aa28.47■■■□□ 2.15
SLC6A8-202ENST00000413787 NCOA2Q15596 1464 aa28.46■■■□□ 2.15
SLC6A8-202ENST00000413787 HNRNPMP52272 730 aaKnown RBP eCLIP28.46■■■□□ 2.15
SLC6A8-202ENST00000413787 ABCA6Q8N139 1617 aa28.46■■■□□ 2.15
SLC6A8-202ENST00000413787 MAP3K1Q13233 1512 aa28.44■■■□□ 2.14
SLC6A8-202ENST00000413787 LRRC9Q6ZRR7 1453 aa28.44■■■□□ 2.14
SLC6A8-202ENST00000413787 KIDINS220Q9ULH0 1771 aa28.44■■■□□ 2.14
SLC6A8-202ENST00000413787 RIMS1Q86UR5 1692 aaKnown RBP28.42■■■□□ 2.14
SLC6A8-202ENST00000413787 REREQ9P2R6 1566 aa28.41■■■□□ 2.14
SLC6A8-202ENST00000413787 MLECQ14165 292 aa28.41■■■□□ 2.14
SLC6A8-202ENST00000413787 ZNF644Q9H582 1327 aaPredicted RBP28.41■■■□□ 2.14
SLC6A8-202ENST00000413787 SPAG9O60271 1321 aaKnown RBP28.38■■■□□ 2.13
SLC6A8-202ENST00000413787 KANK4Q5T7N3 995 aaPredicted RBP28.37■■■□□ 2.13
SLC6A8-202ENST00000413787 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
SLC6A8-202ENST00000413787 MBD5Q9P267 1494 aa28.34■■■□□ 2.13
SLC6A8-202ENST00000413787 AGLP35573 1532 aa28.33■■■□□ 2.13
SLC6A8-202ENST00000413787 ATP7AQ04656 1500 aa28.33■■■□□ 2.13
SLC6A8-202ENST00000413787 INO80Q9ULG1 1556 aaPredicted RBP28.33■■■□□ 2.12
SLC6A8-202ENST00000413787 CAMSAP2Q08AD1 1489 aa28.29■■■□□ 2.12
SLC6A8-202ENST00000413787 APLP2Q06481 763 aa28.28■■■□□ 2.12
SLC6A8-202ENST00000413787 PLPPR3Q6T4P5 718 aa28.23■■■□□ 2.11
SLC6A8-202ENST00000413787 CCDC141Q6ZP82 1450 aa28.22■■■□□ 2.11
SLC6A8-202ENST00000413787 RTEL1-TNFRSF6BF6WH68 1400 aa28.2■■■□□ 2.11
SLC6A8-202ENST00000413787 MYOM3Q5VTT5 1437 aa28.2■■■□□ 2.11
SLC6A8-202ENST00000413787 RSPH4AQ5TD94 716 aa28.2■■■□□ 2.1
SLC6A8-202ENST00000413787 A2MP01023 1474 aa28.2■■■□□ 2.1
SLC6A8-202ENST00000413787 PLXNC1O60486 1568 aa28.2■■■□□ 2.1
SLC6A8-202ENST00000413787 ADGBQ8N7X0 1667 aa28.19■■■□□ 2.1
SLC6A8-202ENST00000413787 ARHGEF5Q12774 1597 aa28.18■■■□□ 2.1
SLC6A8-202ENST00000413787 MIA2Q96PC5 1412 aa28.17■■■□□ 2.1
SLC6A8-202ENST00000413787 LMTK3Q96Q04 1460 aa28.15■■■□□ 2.1
SLC6A8-202ENST00000413787 CEBPAP49715 358 aaPredicted RBP28.14■■■□□ 2.1
SLC6A8-202ENST00000413787 ESF1Q9H501 851 aaKnown RBP28.12■■■□□ 2.09
SLC6A8-202ENST00000413787 CNTLNQ9NXG0 1405 aa28.09■■■□□ 2.09
SLC6A8-202ENST00000413787 TSPY4P0CV99 314 aa28.09■■■□□ 2.09
SLC6A8-202ENST00000413787 TSPY10P0CW01 314 aa28.09■■■□□ 2.09
SLC6A8-202ENST00000413787 C3P01024 1663 aa28.09■■■□□ 2.09
SLC6A8-202ENST00000413787 SETD1BQ9UPS6 1966 aaKnown RBP28.08■■■□□ 2.09
SLC6A8-202ENST00000413787 DHX29Q7Z478 1369 aaKnown RBP28.07■■■□□ 2.08
SLC6A8-202ENST00000413787 PREX1Q8TCU6 1659 aa28.03■■■□□ 2.08
SLC6A8-202ENST00000413787 MAST1Q9Y2H9 1570 aa28.03■■■□□ 2.08
SLC6A8-202ENST00000413787 GGT6Q6P531 493 aa28.03■■■□□ 2.08
SLC6A8-202ENST00000413787 MROH2AA6NES4 1674 aa28.03■■■□□ 2.08
SLC6A8-202ENST00000413787 PTPN23Q9H3S7 1636 aa28.03■■■□□ 2.08
SLC6A8-202ENST00000413787 FGD6Q6ZV73 1430 aa28.01■■■□□ 2.07
SLC6A8-202ENST00000413787 HSPA2P54652 639 aa28■■■□□ 2.07
SLC6A8-202ENST00000413787 CLTCQ00610 1675 aaKnown RBP28■■■□□ 2.07
SLC6A8-202ENST00000413787 PPP6R1Q9UPN7 881 aa27.98■■■□□ 2.07
SLC6A8-202ENST00000413787 ZMYM3Q14202 1370 aa27.98■■■□□ 2.07
SLC6A8-202ENST00000413787 KIF3BO15066 747 aa27.97■■■□□ 2.07
SLC6A8-202ENST00000413787 TCOF1Q13428 1488 aaKnown RBP27.96■■■□□ 2.07
SLC6A8-202ENST00000413787 CROCC2H7BZ55 1655 aa27.94■■■□□ 2.06
SLC6A8-202ENST00000413787 ABCC5O15440 1437 aa27.93■■■□□ 2.06
SLC6A8-202ENST00000413787 UHRF1BP1Q6BDS2 1440 aa27.93■■■□□ 2.06
SLC6A8-202ENST00000413787 SHANK2Q9UPX8 1470 aa27.91■■■□□ 2.06
SLC6A8-202ENST00000413787 DNMT1P26358 1616 aaKnown RBP27.91■■■□□ 2.06
SLC6A8-202ENST00000413787 NPATQ14207 1427 aa27.91■■■□□ 2.06
SLC6A8-202ENST00000413787 DAPK1P53355 1430 aa27.89■■■□□ 2.06
SLC6A8-202ENST00000413787 FAM135AQ9P2D6 1515 aa27.86■■■□□ 2.05
SLC6A8-202ENST00000413787 PTPRKQ15262 1439 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 232.7 ms