RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 CCNB3Q8WWL7 1395 aa20.48■□□□□ 0.87
SF1-206ENST00000413725 FANCAO15360 1455 aa20.46■□□□□ 0.87
SF1-206ENST00000413725 NEO1Q92859 1461 aa20.45■□□□□ 0.86
SF1-206ENST00000413725 GPATCH8Q9UKJ3 1502 aaKnown RBP20.44■□□□□ 0.86
SF1-206ENST00000413725 PHLDB1Q86UU1 1377 aa20.43■□□□□ 0.86
SF1-206ENST00000413725 KDM6BO15054 1643 aa20.42■□□□□ 0.86
SF1-206ENST00000413725 EFCAB2Q5VUJ9 269 aa20.41■□□□□ 0.86
SF1-206ENST00000413725 AKNAQ7Z591 1439 aa20.38■□□□□ 0.85
SF1-206ENST00000413725 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
SF1-206ENST00000413725 MYOM3Q5VTT5 1437 aa20.37■□□□□ 0.85
SF1-206ENST00000413725 SAMD9LQ8IVG5 1584 aa20.37■□□□□ 0.85
SF1-206ENST00000413725 ADGRL1O94910 1474 aa20.36■□□□□ 0.85
SF1-206ENST00000413725 PPARGC1BQ86YN6 1023 aaKnown RBP20.35■□□□□ 0.85
SF1-206ENST00000413725 ABCC1P33527 1531 aa20.34■□□□□ 0.85
SF1-206ENST00000413725 RICTORQ6R327 1708 aa20.33■□□□□ 0.85
SF1-206ENST00000413725 PLEKHH2Q8IVE3 1493 aa20.33■□□□□ 0.85
SF1-206ENST00000413725 ZNF777Q9ULD5 760 aaPredicted RBP20.33■□□□□ 0.85
SF1-206ENST00000413725 MIA2Q96PC5 1412 aa20.33■□□□□ 0.84
SF1-206ENST00000413725 PTPN23Q9H3S7 1636 aa20.31■□□□□ 0.84
SF1-206ENST00000413725 DENND4BO75064 1496 aaPredicted RBP20.3■□□□□ 0.84
SF1-206ENST00000413725 SCAPERQ9BY12 1400 aa20.3■□□□□ 0.84
SF1-206ENST00000413725 SYCP2Q9BX26 1530 aa20.3■□□□□ 0.84
SF1-206ENST00000413725 CAMSAP2Q08AD1 1489 aa20.3■□□□□ 0.84
SF1-206ENST00000413725 FGD6Q6ZV73 1430 aa20.28■□□□□ 0.84
SF1-206ENST00000413725 COL17A1Q9UMD9 1497 aaPredicted RBP20.28■□□□□ 0.84
SF1-206ENST00000413725 KIAA1107Q9UPP5 1409 aa20.27■□□□□ 0.84
SF1-206ENST00000413725 FRMPD1Q5SYB0 1578 aa20.27■□□□□ 0.84
SF1-206ENST00000413725 POGZQ7Z3K3 1410 aa20.26■□□□□ 0.83
SF1-206ENST00000413725 ZNF518AQ6AHZ1 1483 aa20.25■□□□□ 0.83
SF1-206ENST00000413725 ARHGEF12Q9NZN5 1544 aa20.24■□□□□ 0.83
SF1-206ENST00000413725 ZNF644Q9H582 1327 aaPredicted RBP20.24■□□□□ 0.83
SF1-206ENST00000413725 TCOF1Q13428 1488 aaKnown RBP20.23■□□□□ 0.83
SF1-206ENST00000413725 ZMYM4Q5VZL5 1548 aa20.22■□□□□ 0.83
SF1-206ENST00000413725 KDM5CP41229 1560 aa20.22■□□□□ 0.83
SF1-206ENST00000413725 ARHGEF5Q12774 1597 aa20.22■□□□□ 0.83
SF1-206ENST00000413725 RAPGEF3O95398 923 aa20.22■□□□□ 0.83
SF1-206ENST00000413725 TRAPPC8Q9Y2L5 1435 aa20.2■□□□□ 0.82
SF1-206ENST00000413725 HNRNPMP52272 730 aaKnown RBP eCLIP20.2■□□□□ 0.82
SF1-206ENST00000413725 HECW2Q9P2P5 1572 aa20.2■□□□□ 0.82
SF1-206ENST00000413725 CROCC2H7BZ55 1655 aa20.19■□□□□ 0.82
SF1-206ENST00000413725 MBD5Q9P267 1494 aa20.19■□□□□ 0.82
SF1-206ENST00000413725 CCDC141Q6ZP82 1450 aa20.18■□□□□ 0.82
SF1-206ENST00000413725 DNMT1P26358 1616 aaKnown RBP20.17■□□□□ 0.82
SF1-206ENST00000413725 RSPH4AQ5TD94 716 aa20.17■□□□□ 0.82
SF1-206ENST00000413725 AFAP1Q8N556 730 aa20.16■□□□□ 0.82
SF1-206ENST00000413725 MAGI2Q86UL8 1455 aa20.16■□□□□ 0.82
SF1-206ENST00000413725 FAM50AQ14320 339 aaKnown RBP20.15■□□□□ 0.82
SF1-206ENST00000413725 RRBP1Q9P2E9 1410 aaKnown RBP20.15■□□□□ 0.82
SF1-206ENST00000413725 ZFYVE16Q7Z3T8 1539 aa20.15■□□□□ 0.82
SF1-206ENST00000413725 KIDINS220Q9ULH0 1771 aa20.15■□□□□ 0.82
SF1-206ENST00000413725 INO80Q9ULG1 1556 aaPredicted RBP20.14■□□□□ 0.81
SF1-206ENST00000413725 ARHGEF40Q8TER5 1519 aa20.14■□□□□ 0.81
SF1-206ENST00000413725 MLH3Q9UHC1 1453 aa20.13■□□□□ 0.81
SF1-206ENST00000413725 ATP7AQ04656 1500 aa20.12■□□□□ 0.81
SF1-206ENST00000413725 SPAG9O60271 1321 aaKnown RBP20.12■□□□□ 0.81
SF1-206ENST00000413725 MYT1LQ9UL68 1186 aa20.12■□□□□ 0.81
SF1-206ENST00000413725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.11■□□□□ 0.81
SF1-206ENST00000413725 MAST1Q9Y2H9 1570 aa20.11■□□□□ 0.81
SF1-206ENST00000413725 DAPK1P53355 1430 aa20.1■□□□□ 0.81
SF1-206ENST00000413725 ADGBQ8N7X0 1667 aa20.1■□□□□ 0.81
SF1-206ENST00000413725 ABCA6Q8N139 1617 aa20.1■□□□□ 0.81
SF1-206ENST00000413725 SHANK2Q9UPX8 1470 aa20.1■□□□□ 0.81
SF1-206ENST00000413725 TSPY4P0CV99 314 aa20.09■□□□□ 0.81
SF1-206ENST00000413725 TSPY10P0CW01 314 aa20.09■□□□□ 0.81
SF1-206ENST00000413725 RTEL1-TNFRSF6BF6WH68 1400 aa20.08■□□□□ 0.8
SF1-206ENST00000413725 ABCC5O15440 1437 aa20.08■□□□□ 0.8
SF1-206ENST00000413725 DIP2CQ9Y2E4 1556 aa20.08■□□□□ 0.8
SF1-206ENST00000413725 C9orf84Q5VXU9 1444 aa20.07■□□□□ 0.8
SF1-206ENST00000413725 YEATS2Q9ULM3 1422 aa20.07■□□□□ 0.8
SF1-206ENST00000413725 PLXNC1O60486 1568 aa20.05■□□□□ 0.8
SF1-206ENST00000413725 ATP10AO60312 1499 aa20.03■□□□□ 0.8
SF1-206ENST00000413725 REREQ9P2R6 1566 aa20.02■□□□□ 0.8
SF1-206ENST00000413725 ITGAEP38570 1179 aa19.98■□□□□ 0.79
SF1-206ENST00000413725 ADGRL2O95490 1459 aa19.98■□□□□ 0.79
SF1-206ENST00000413725 ANKRD30AQ9BXX3 1397 aa19.97■□□□□ 0.79
SF1-206ENST00000413725 SIGLEC1Q9BZZ2 1709 aa19.97■□□□□ 0.79
SF1-206ENST00000413725 A2MP01023 1474 aa19.97■□□□□ 0.79
SF1-206ENST00000413725 CHIC2Q9UKJ5 165 aa19.96■□□□□ 0.79
SF1-206ENST00000413725 PTPRKQ15262 1439 aa19.94■□□□□ 0.78
SF1-206ENST00000413725 DUOX2Q9NRD8 1548 aa19.94■□□□□ 0.78
SF1-206ENST00000413725 NCOA1Q15788 1441 aa19.93■□□□□ 0.78
SF1-206ENST00000413725 AGLP35573 1532 aa19.93■□□□□ 0.78
SF1-206ENST00000413725 ROCK1Q13464 1354 aa19.93■□□□□ 0.78
SF1-206ENST00000413725 KIF15Q9NS87 1388 aa19.93■□□□□ 0.78
SF1-206ENST00000413725 EIF2AK4Q9P2K8 1649 aaKnown RBP19.92■□□□□ 0.78
SF1-206ENST00000413725 BCORL1Q5H9F3 1711 aa19.92■□□□□ 0.78
SF1-206ENST00000413725 ARID4BQ4LE39 1312 aaPredicted RBP19.92■□□□□ 0.78
SF1-206ENST00000413725 DHX29Q7Z478 1369 aaKnown RBP19.91■□□□□ 0.78
SF1-206ENST00000413725 RRP7BPQ9NSQ0 103 aa19.9■□□□□ 0.78
SF1-206ENST00000413725 GCC2Q8IWJ2 1684 aa19.9■□□□□ 0.78
SF1-206ENST00000413725 ERBINQ96RT1 1412 aa19.88■□□□□ 0.77
SF1-206ENST00000413725 FER1L4A9Z1Z3 1794 aa19.87■□□□□ 0.77
SF1-206ENST00000413725 RNF17Q9BXT8 1623 aaKnown RBP19.84■□□□□ 0.77
SF1-206ENST00000413725 ADAMTSL3P82987 1691 aa19.84■□□□□ 0.77
SF1-206ENST00000413725 ANKRD50Q9ULJ7 1429 aa19.83■□□□□ 0.76
SF1-206ENST00000413725 KIF3BO15066 747 aa19.82■□□□□ 0.76
SF1-206ENST00000413725 DEPDC5O75140 1603 aa19.81■□□□□ 0.76
SF1-206ENST00000413725 HFM1A2PYH4 1435 aa19.8■□□□□ 0.76
SF1-206ENST00000413725 MLECQ14165 292 aa19.8■□□□□ 0.76
SF1-206ENST00000413725 MADDQ8WXG6 1647 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms