RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 FYCO1Q9BQS8 1478 aa13.88□□□□□ -0.19
HERPUD2-203ENST00000413517 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
HERPUD2-203ENST00000413517 RICTORQ6R327 1708 aa13.87□□□□□ -0.19
HERPUD2-203ENST00000413517 TROQ12816 1431 aaPredicted RBP13.87□□□□□ -0.19
HERPUD2-203ENST00000413517 LOC105371045A0A1W2PR82 267 aa13.86□□□□□ -0.19
HERPUD2-203ENST00000413517 CCDC18Q5T9S5 1454 aa13.86□□□□□ -0.19
HERPUD2-203ENST00000413517 CDC42BPBQ9Y5S2 1711 aa13.85□□□□□ -0.19
HERPUD2-203ENST00000413517 CFAP74Q9C0B2 1584 aa13.85□□□□□ -0.19
HERPUD2-203ENST00000413517 KDM4FA0A1W2PPD8 638 aa13.84□□□□□ -0.19
HERPUD2-203ENST00000413517 FANCAO15360 1455 aa13.84□□□□□ -0.19
HERPUD2-203ENST00000413517 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.2
HERPUD2-203ENST00000413517 CDC42BPAQ5VT25 1732 aa13.82□□□□□ -0.2
HERPUD2-203ENST00000413517 PLCH2O75038 1416 aa13.81□□□□□ -0.2
HERPUD2-203ENST00000413517 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
HERPUD2-203ENST00000413517 RAPGEF3O95398 923 aa13.81□□□□□ -0.2
HERPUD2-203ENST00000413517 PREX2Q70Z35 1606 aa13.81□□□□□ -0.2
HERPUD2-203ENST00000413517 SCAF1Q9H7N4 1312 aaKnown RBP13.81□□□□□ -0.2
HERPUD2-203ENST00000413517 ADGRL1O94910 1474 aa13.8□□□□□ -0.2
HERPUD2-203ENST00000413517 SIGLEC1Q9BZZ2 1709 aa13.78□□□□□ -0.2
HERPUD2-203ENST00000413517 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
HERPUD2-203ENST00000413517 DENND4BO75064 1496 aaPredicted RBP13.78□□□□□ -0.2
HERPUD2-203ENST00000413517 ZMYM4Q5VZL5 1548 aa13.78□□□□□ -0.2
HERPUD2-203ENST00000413517 ARHGEF40Q8TER5 1519 aa13.77□□□□□ -0.21
HERPUD2-203ENST00000413517 ARHGAP5Q13017 1502 aa13.76□□□□□ -0.21
HERPUD2-203ENST00000413517 POGZQ7Z3K3 1410 aa13.74□□□□□ -0.21
HERPUD2-203ENST00000413517 SCAPERQ9BY12 1400 aa13.74□□□□□ -0.21
HERPUD2-203ENST00000413517 ITSN2Q9NZM3 1697 aa13.74□□□□□ -0.21
HERPUD2-203ENST00000413517 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
HERPUD2-203ENST00000413517 ABCC1P33527 1531 aa13.72□□□□□ -0.21
HERPUD2-203ENST00000413517 ARHGEF12Q9NZN5 1544 aa13.72□□□□□ -0.21
HERPUD2-203ENST00000413517 ADAMTSL3P82987 1691 aa13.72□□□□□ -0.21
HERPUD2-203ENST00000413517 KDM5CP41229 1560 aa13.71□□□□□ -0.21
HERPUD2-203ENST00000413517 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.21
HERPUD2-203ENST00000413517 ZFYVE16Q7Z3T8 1539 aa13.71□□□□□ -0.21
HERPUD2-203ENST00000413517 EHBP1L1Q8N3D4 1523 aa13.71□□□□□ -0.21
HERPUD2-203ENST00000413517 BCORL1Q5H9F3 1711 aa13.71□□□□□ -0.21
HERPUD2-203ENST00000413517 EFCAB2Q5VUJ9 269 aa13.71□□□□□ -0.21
HERPUD2-203ENST00000413517 VPS8Q8N3P4 1428 aa13.71□□□□□ -0.22
HERPUD2-203ENST00000413517 TIAM1Q13009 1591 aa13.71□□□□□ -0.22
HERPUD2-203ENST00000413517 GPATCH8Q9UKJ3 1502 aaKnown RBP13.7□□□□□ -0.22
HERPUD2-203ENST00000413517 MTUS2Q5JR59 1369 aa13.68□□□□□ -0.22
HERPUD2-203ENST00000413517 HECW2Q9P2P5 1572 aa13.67□□□□□ -0.22
HERPUD2-203ENST00000413517 TRAPPC8Q9Y2L5 1435 aa13.67□□□□□ -0.22
HERPUD2-203ENST00000413517 MADDQ8WXG6 1647 aa13.67□□□□□ -0.22
HERPUD2-203ENST00000413517 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
HERPUD2-203ENST00000413517 MAGI2Q86UL8 1455 aa13.67□□□□□ -0.22
HERPUD2-203ENST00000413517 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
HERPUD2-203ENST00000413517 KIDINS220Q9ULH0 1771 aa13.66□□□□□ -0.22
HERPUD2-203ENST00000413517 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
HERPUD2-203ENST00000413517 SUPT6HQ7KZ85 1726 aaKnown RBP13.65□□□□□ -0.22
HERPUD2-203ENST00000413517 DIP2CQ9Y2E4 1556 aa13.65□□□□□ -0.22
HERPUD2-203ENST00000413517 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
HERPUD2-203ENST00000413517 RIMS1Q86UR5 1692 aaKnown RBP13.63□□□□□ -0.23
HERPUD2-203ENST00000413517 NCOA2Q15596 1464 aa13.62□□□□□ -0.23
HERPUD2-203ENST00000413517 CCNB3Q8WWL7 1395 aa13.62□□□□□ -0.23
HERPUD2-203ENST00000413517 LRRC9Q6ZRR7 1453 aa13.61□□□□□ -0.23
HERPUD2-203ENST00000413517 ATP10AO60312 1499 aa13.61□□□□□ -0.23
HERPUD2-203ENST00000413517 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
HERPUD2-203ENST00000413517 MAP3K1Q13233 1512 aa13.6□□□□□ -0.23
HERPUD2-203ENST00000413517 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
HERPUD2-203ENST00000413517 FER1L4A9Z1Z3 1794 aa13.6□□□□□ -0.23
HERPUD2-203ENST00000413517 REREQ9P2R6 1566 aa13.59□□□□□ -0.23
HERPUD2-203ENST00000413517 INO80Q9ULG1 1556 aaPredicted RBP13.59□□□□□ -0.23
HERPUD2-203ENST00000413517 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
HERPUD2-203ENST00000413517 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
HERPUD2-203ENST00000413517 PTPRMP28827 1452 aa13.59□□□□□ -0.23
HERPUD2-203ENST00000413517 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
HERPUD2-203ENST00000413517 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
HERPUD2-203ENST00000413517 KANK4Q5T7N3 995 aaPredicted RBP13.58□□□□□ -0.24
HERPUD2-203ENST00000413517 KIAA1107Q9UPP5 1409 aa13.57□□□□□ -0.24
HERPUD2-203ENST00000413517 CFDP1Q9UEE9 299 aaPredicted RBP13.57□□□□□ -0.24
HERPUD2-203ENST00000413517 PLEKHH2Q8IVE3 1493 aa13.56□□□□□ -0.24
HERPUD2-203ENST00000413517 MBD5Q9P267 1494 aa13.56□□□□□ -0.24
HERPUD2-203ENST00000413517 HNRNPMP52272 730 aaKnown RBP eCLIP13.56□□□□□ -0.242e-6■■■■■ 28.7
HERPUD2-203ENST00000413517 ATP7AQ04656 1500 aa13.55□□□□□ -0.24
HERPUD2-203ENST00000413517 CAMSAP2Q08AD1 1489 aa13.55□□□□□ -0.24
HERPUD2-203ENST00000413517 FKBP8Q14318 412 aa13.53□□□□□ -0.24
HERPUD2-203ENST00000413517 AGLP35573 1532 aa13.53□□□□□ -0.24
HERPUD2-203ENST00000413517 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
HERPUD2-203ENST00000413517 MLECQ14165 292 aa13.52□□□□□ -0.25
HERPUD2-203ENST00000413517 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
HERPUD2-203ENST00000413517 SPAG9O60271 1321 aaKnown RBP13.5□□□□□ -0.25
HERPUD2-203ENST00000413517 MYT1LQ9UL68 1186 aa13.5□□□□□ -0.25
HERPUD2-203ENST00000413517 ARHGEF5Q12774 1597 aa13.49□□□□□ -0.25
HERPUD2-203ENST00000413517 MYOM3Q5VTT5 1437 aa13.48□□□□□ -0.25
HERPUD2-203ENST00000413517 CCDC141Q6ZP82 1450 aa13.48□□□□□ -0.25
HERPUD2-203ENST00000413517 C3P01024 1663 aa13.47□□□□□ -0.25
HERPUD2-203ENST00000413517 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
HERPUD2-203ENST00000413517 A2MP01023 1474 aa13.46□□□□□ -0.25
HERPUD2-203ENST00000413517 CROCC2H7BZ55 1655 aa13.45□□□□□ -0.26
HERPUD2-203ENST00000413517 LMTK3Q96Q04 1460 aa13.45□□□□□ -0.26
HERPUD2-203ENST00000413517 PTPN23Q9H3S7 1636 aa13.45□□□□□ -0.26
HERPUD2-203ENST00000413517 RTEL1-TNFRSF6BF6WH68 1400 aa13.44□□□□□ -0.26
HERPUD2-203ENST00000413517 MIA2Q96PC5 1412 aa13.44□□□□□ -0.26
HERPUD2-203ENST00000413517 MAST1Q9Y2H9 1570 aa13.44□□□□□ -0.26
HERPUD2-203ENST00000413517 SETD1BQ9UPS6 1966 aaKnown RBP13.43□□□□□ -0.26
HERPUD2-203ENST00000413517 MROH2AA6NES4 1674 aa13.43□□□□□ -0.26
HERPUD2-203ENST00000413517 CLTCQ00610 1675 aaKnown RBP13.43□□□□□ -0.26
HERPUD2-203ENST00000413517 PREX1Q8TCU6 1659 aa13.41□□□□□ -0.26
HERPUD2-203ENST00000413517 CEBPAP49715 358 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms