RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
HDAC9-206ENST00000413380 PHLDB1Q86UU1 1377 aa17.97■□□□□ 0.47
HDAC9-206ENST00000413380 MYOM3Q5VTT5 1437 aa17.97■□□□□ 0.47
HDAC9-206ENST00000413380 MIA2Q96PC5 1412 aa17.95■□□□□ 0.46
HDAC9-206ENST00000413380 PLCH2O75038 1416 aa17.93■□□□□ 0.46
HDAC9-206ENST00000413380 RRBP1Q9P2E9 1410 aaKnown RBP17.93■□□□□ 0.46
HDAC9-206ENST00000413380 CCNB3Q8WWL7 1395 aa17.92■□□□□ 0.46
HDAC9-206ENST00000413380 FGD6Q6ZV73 1430 aa17.92■□□□□ 0.46
HDAC9-206ENST00000413380 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
HDAC9-206ENST00000413380 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
HDAC9-206ENST00000413380 PPRC1Q5VV67 1664 aaKnown RBP17.91■□□□□ 0.46
HDAC9-206ENST00000413380 TCOF1Q13428 1488 aaKnown RBP17.9■□□□□ 0.46
HDAC9-206ENST00000413380 CFAP74Q9C0B2 1584 aa17.9■□□□□ 0.46
HDAC9-206ENST00000413380 PTPN23Q9H3S7 1636 aa17.89■□□□□ 0.45
HDAC9-206ENST00000413380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.89■□□□□ 0.45
HDAC9-206ENST00000413380 CD109Q6YHK3 1445 aa17.89■□□□□ 0.45
HDAC9-206ENST00000413380 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
HDAC9-206ENST00000413380 SAMD9LQ8IVG5 1584 aa17.86■□□□□ 0.45
HDAC9-206ENST00000413380 NEO1Q92859 1461 aa17.84■□□□□ 0.45
HDAC9-206ENST00000413380 FAM69CQ0P6D2 419 aa17.84■□□□□ 0.45
HDAC9-206ENST00000413380 FANCAO15360 1455 aa17.83■□□□□ 0.45
HDAC9-206ENST00000413380 CAMSAP2Q08AD1 1489 aa17.83■□□□□ 0.45
HDAC9-206ENST00000413380 ABCC1P33527 1531 aa17.82■□□□□ 0.44
HDAC9-206ENST00000413380 PLEKHH2Q8IVE3 1493 aa17.82■□□□□ 0.44
HDAC9-206ENST00000413380 TSPOAP1O95153 1857 aa17.82■□□□□ 0.44
HDAC9-206ENST00000413380 CFDP1Q9UEE9 299 aaPredicted RBP17.82■□□□□ 0.44
HDAC9-206ENST00000413380 TEX14Q8IWB6 1497 aa17.82■□□□□ 0.44
HDAC9-206ENST00000413380 MAPK8IP2Q13387 824 aaPredicted RBP17.81■□□□□ 0.44
HDAC9-206ENST00000413380 ARHGEF5Q12774 1597 aa17.81■□□□□ 0.44
HDAC9-206ENST00000413380 KIAA1107Q9UPP5 1409 aa17.81■□□□□ 0.44
HDAC9-206ENST00000413380 EFCAB2Q5VUJ9 269 aa17.79■□□□□ 0.44
HDAC9-206ENST00000413380 DNMT1P26358 1616 aaKnown RBP17.79■□□□□ 0.44
HDAC9-206ENST00000413380 CROCC2H7BZ55 1655 aa17.77■□□□□ 0.44
HDAC9-206ENST00000413380 MBD5Q9P267 1494 aa17.77■□□□□ 0.44
HDAC9-206ENST00000413380 AKNAQ7Z591 1439 aa17.76■□□□□ 0.43
HDAC9-206ENST00000413380 SYCP2Q9BX26 1530 aa17.76■□□□□ 0.43
HDAC9-206ENST00000413380 ARHGEF12Q9NZN5 1544 aa17.75■□□□□ 0.43
HDAC9-206ENST00000413380 ADGRL1O94910 1474 aa17.74■□□□□ 0.43
HDAC9-206ENST00000413380 ZNF644Q9H582 1327 aaPredicted RBP17.73■□□□□ 0.43
HDAC9-206ENST00000413380 RICTORQ6R327 1708 aa17.73■□□□□ 0.43
HDAC9-206ENST00000413380 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
HDAC9-206ENST00000413380 MAST1Q9Y2H9 1570 aa17.72■□□□□ 0.43
HDAC9-206ENST00000413380 SHANK2Q9UPX8 1470 aa17.72■□□□□ 0.43
HDAC9-206ENST00000413380 KDM5CP41229 1560 aa17.71■□□□□ 0.43
HDAC9-206ENST00000413380 CCDC141Q6ZP82 1450 aa17.71■□□□□ 0.43
HDAC9-206ENST00000413380 DAPK1P53355 1430 aa17.71■□□□□ 0.43
HDAC9-206ENST00000413380 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
HDAC9-206ENST00000413380 ABCC5O15440 1437 aa17.7■□□□□ 0.42
HDAC9-206ENST00000413380 POGZQ7Z3K3 1410 aa17.69■□□□□ 0.42
HDAC9-206ENST00000413380 SCAPERQ9BY12 1400 aa17.69■□□□□ 0.42
HDAC9-206ENST00000413380 ADGBQ8N7X0 1667 aa17.68■□□□□ 0.42
HDAC9-206ENST00000413380 FRMPD1Q5SYB0 1578 aa17.68■□□□□ 0.42
HDAC9-206ENST00000413380 ZNF777Q9ULD5 760 aaPredicted RBP17.68■□□□□ 0.42
HDAC9-206ENST00000413380 ZNF518AQ6AHZ1 1483 aa17.68■□□□□ 0.42
HDAC9-206ENST00000413380 TRAPPC8Q9Y2L5 1435 aa17.67■□□□□ 0.42
HDAC9-206ENST00000413380 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
HDAC9-206ENST00000413380 DMRT2Q9Y5R5 561 aa17.67■□□□□ 0.42
HDAC9-206ENST00000413380 ZMYM4Q5VZL5 1548 aa17.67■□□□□ 0.42
HDAC9-206ENST00000413380 INO80Q9ULG1 1556 aaPredicted RBP17.66■□□□□ 0.42
HDAC9-206ENST00000413380 PTPRKQ15262 1439 aa17.66■□□□□ 0.42
HDAC9-206ENST00000413380 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
HDAC9-206ENST00000413380 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
HDAC9-206ENST00000413380 DENND4BO75064 1496 aaPredicted RBP17.66■□□□□ 0.42
HDAC9-206ENST00000413380 ADGRL2O95490 1459 aa17.66■□□□□ 0.42
HDAC9-206ENST00000413380 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
HDAC9-206ENST00000413380 PLXNC1O60486 1568 aa17.64■□□□□ 0.41
HDAC9-206ENST00000413380 RTEL1-TNFRSF6BF6WH68 1400 aa17.64■□□□□ 0.41
HDAC9-206ENST00000413380 ZFYVE16Q7Z3T8 1539 aa17.63■□□□□ 0.41
HDAC9-206ENST00000413380 HNRNPMP52272 730 aaKnown RBP eCLIP17.63■□□□□ 0.41
HDAC9-206ENST00000413380 HECW2Q9P2P5 1572 aa17.62■□□□□ 0.41
HDAC9-206ENST00000413380 KIDINS220Q9ULH0 1771 aa17.62■□□□□ 0.41
HDAC9-206ENST00000413380 ROCK1Q13464 1354 aa17.62■□□□□ 0.41
HDAC9-206ENST00000413380 C9orf84Q5VXU9 1444 aa17.62■□□□□ 0.41
HDAC9-206ENST00000413380 MLH3Q9UHC1 1453 aa17.62■□□□□ 0.41
HDAC9-206ENST00000413380 COL17A1Q9UMD9 1497 aaPredicted RBP17.62■□□□□ 0.41
HDAC9-206ENST00000413380 GCC2Q8IWJ2 1684 aa17.61■□□□□ 0.41
HDAC9-206ENST00000413380 ATP7AQ04656 1500 aa17.6■□□□□ 0.41
HDAC9-206ENST00000413380 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
HDAC9-206ENST00000413380 KDM6BO15054 1643 aa17.58■□□□□ 0.41
HDAC9-206ENST00000413380 NCOA1Q15788 1441 aa17.57■□□□□ 0.4
HDAC9-206ENST00000413380 KCNA4P22459 653 aa17.57■□□□□ 0.4
HDAC9-206ENST00000413380 HFM1A2PYH4 1435 aa17.56■□□□□ 0.4
HDAC9-206ENST00000413380 TSPY4P0CV99 314 aa17.55■□□□□ 0.4
HDAC9-206ENST00000413380 TSPY10P0CW01 314 aa17.55■□□□□ 0.4
HDAC9-206ENST00000413380 AFAP1Q8N556 730 aa17.55■□□□□ 0.4
HDAC9-206ENST00000413380 ANKRD30AQ9BXX3 1397 aa17.54■□□□□ 0.4
HDAC9-206ENST00000413380 SPAG9O60271 1321 aaKnown RBP17.54■□□□□ 0.4
HDAC9-206ENST00000413380 ABCA6Q8N139 1617 aa17.54■□□□□ 0.4
HDAC9-206ENST00000413380 RAPGEF3O95398 923 aa17.53■□□□□ 0.4
HDAC9-206ENST00000413380 NAIPQ13075 1403 aa17.53■□□□□ 0.4
HDAC9-206ENST00000413380 REREQ9P2R6 1566 aa17.53■□□□□ 0.4
HDAC9-206ENST00000413380 DIP2CQ9Y2E4 1556 aa17.53■□□□□ 0.4
HDAC9-206ENST00000413380 ARHGEF40Q8TER5 1519 aa17.52■□□□□ 0.4
HDAC9-206ENST00000413380 BCORL1Q5H9F3 1711 aa17.51■□□□□ 0.39
HDAC9-206ENST00000413380 DUOX2Q9NRD8 1548 aa17.51■□□□□ 0.39
HDAC9-206ENST00000413380 ITGAEP38570 1179 aa17.5■□□□□ 0.39
HDAC9-206ENST00000413380 EIF2AK4Q9P2K8 1649 aaKnown RBP17.49■□□□□ 0.39
HDAC9-206ENST00000413380 KIF15Q9NS87 1388 aa17.49■□□□□ 0.39
HDAC9-206ENST00000413380 PCGF6Q9BYE7 350 aa17.48■□□□□ 0.39
HDAC9-206ENST00000413380 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms