RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
HCG18-234ENST00000413358 PTPRMP28827 1452 aa13.77□□□□□ -0.21
HCG18-234ENST00000413358 TTC37Q6PGP7 1564 aa13.77□□□□□ -0.21
HCG18-234ENST00000413358 ITSN2Q9NZM3 1697 aa13.76□□□□□ -0.21
HCG18-234ENST00000413358 DENND4BO75064 1496 aaPredicted RBP13.76□□□□□ -0.21
HCG18-234ENST00000413358 CCNB3Q8WWL7 1395 aa13.76□□□□□ -0.21
HCG18-234ENST00000413358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.75□□□□□ -0.21
HCG18-234ENST00000413358 POGZQ7Z3K3 1410 aa13.74□□□□□ -0.21
HCG18-234ENST00000413358 AKNAQ7Z591 1439 aa13.74□□□□□ -0.21
HCG18-234ENST00000413358 FBXO41Q8TF61 875 aa13.74□□□□□ -0.21
HCG18-234ENST00000413358 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
HCG18-234ENST00000413358 FANCAO15360 1455 aa13.73□□□□□ -0.21
HCG18-234ENST00000413358 MYO5CQ9NQX4 1742 aa13.73□□□□□ -0.21
HCG18-234ENST00000413358 ADAMTSL3P82987 1691 aa13.72□□□□□ -0.21
HCG18-234ENST00000413358 PREX2Q70Z35 1606 aa13.72□□□□□ -0.21
HCG18-234ENST00000413358 CFAP74Q9C0B2 1584 aa13.72□□□□□ -0.21
HCG18-234ENST00000413358 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
HCG18-234ENST00000413358 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
HCG18-234ENST00000413358 CDC42BPAQ5VT25 1732 aa13.7□□□□□ -0.22
HCG18-234ENST00000413358 FGD6Q6ZV73 1430 aa13.7□□□□□ -0.22
HCG18-234ENST00000413358 ARHGAP5Q13017 1502 aa13.69□□□□□ -0.22
HCG18-234ENST00000413358 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
HCG18-234ENST00000413358 FRMPD1Q5SYB0 1578 aa13.68□□□□□ -0.22
HCG18-234ENST00000413358 MIA2Q96PC5 1412 aa13.68□□□□□ -0.22
HCG18-234ENST00000413358 MLECQ14165 292 aa13.68□□□□□ -0.22
HCG18-234ENST00000413358 EFCAB2Q5VUJ9 269 aa13.67□□□□□ -0.22
HCG18-234ENST00000413358 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
HCG18-234ENST00000413358 ARHGEF40Q8TER5 1519 aa13.67□□□□□ -0.22
HCG18-234ENST00000413358 MADDQ8WXG6 1647 aa13.67□□□□□ -0.22
HCG18-234ENST00000413358 PTPN23Q9H3S7 1636 aa13.67□□□□□ -0.22
HCG18-234ENST00000413358 RRBP1Q9P2E9 1410 aaKnown RBP13.66□□□□□ -0.22
HCG18-234ENST00000413358 CFDP1Q9UEE9 299 aaPredicted RBP13.66□□□□□ -0.22
HCG18-234ENST00000413358 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
HCG18-234ENST00000413358 PLCH2O75038 1416 aa13.65□□□□□ -0.22
HCG18-234ENST00000413358 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
HCG18-234ENST00000413358 CDC42BPBQ9Y5S2 1711 aa13.65□□□□□ -0.22
HCG18-234ENST00000413358 CAMSAP2Q08AD1 1489 aa13.65□□□□□ -0.22
HCG18-234ENST00000413358 SCAPERQ9BY12 1400 aa13.64□□□□□ -0.23
HCG18-234ENST00000413358 RICTORQ6R327 1708 aa13.64□□□□□ -0.23
HCG18-234ENST00000413358 RIMS1Q86UR5 1692 aaKnown RBP13.63□□□□□ -0.23
HCG18-234ENST00000413358 TCOF1Q13428 1488 aaKnown RBP13.63□□□□□ -0.23
HCG18-234ENST00000413358 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
HCG18-234ENST00000413358 ZNF777Q9ULD5 760 aaPredicted RBP13.63□□□□□ -0.23
HCG18-234ENST00000413358 SAMD9LQ8IVG5 1584 aa13.62□□□□□ -0.23
HCG18-234ENST00000413358 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
HCG18-234ENST00000413358 LMTK3Q96Q04 1460 aa13.61□□□□□ -0.23
HCG18-234ENST00000413358 ZMYM4Q5VZL5 1548 aa13.61□□□□□ -0.23
HCG18-234ENST00000413358 HSPA2P54652 639 aa13.61□□□□□ -0.23
HCG18-234ENST00000413358 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
HCG18-234ENST00000413358 YEATS2Q9ULM3 1422 aa13.6□□□□□ -0.23
HCG18-234ENST00000413358 ABCC1P33527 1531 aa13.59□□□□□ -0.23
HCG18-234ENST00000413358 SYCP2Q9BX26 1530 aa13.59□□□□□ -0.23
HCG18-234ENST00000413358 ATP10AO60312 1499 aa13.59□□□□□ -0.23
HCG18-234ENST00000413358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.58□□□□□ -0.23
HCG18-234ENST00000413358 ESF1Q9H501 851 aaKnown RBP13.58□□□□□ -0.24
HCG18-234ENST00000413358 C9orf84Q5VXU9 1444 aa13.57□□□□□ -0.24
HCG18-234ENST00000413358 ZNF644Q9H582 1327 aaPredicted RBP13.57□□□□□ -0.24
HCG18-234ENST00000413358 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
HCG18-234ENST00000413358 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
HCG18-234ENST00000413358 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
HCG18-234ENST00000413358 KIAA1107Q9UPP5 1409 aa13.55□□□□□ -0.24
HCG18-234ENST00000413358 ZNF518AQ6AHZ1 1483 aa13.55□□□□□ -0.24
HCG18-234ENST00000413358 ARHGEF5Q12774 1597 aa13.54□□□□□ -0.24
HCG18-234ENST00000413358 CROCC2H7BZ55 1655 aa13.54□□□□□ -0.24
HCG18-234ENST00000413358 FER1L4A9Z1Z3 1794 aa13.54□□□□□ -0.24
HCG18-234ENST00000413358 ITGAEP38570 1179 aa13.54□□□□□ -0.24
HCG18-234ENST00000413358 AFAP1Q8N556 730 aa13.54□□□□□ -0.24
HCG18-234ENST00000413358 CERKQ8TCT0 537 aa13.54□□□□□ -0.24
HCG18-234ENST00000413358 DAPK1P53355 1430 aa13.54□□□□□ -0.24
HCG18-234ENST00000413358 SHANK2Q9UPX8 1470 aa13.52□□□□□ -0.25
HCG18-234ENST00000413358 ARHGEF12Q9NZN5 1544 aa13.51□□□□□ -0.25
HCG18-234ENST00000413358 MBD5Q9P267 1494 aa13.51□□□□□ -0.25
HCG18-234ENST00000413358 CEBPAP49715 358 aaPredicted RBP13.51□□□□□ -0.25
HCG18-234ENST00000413358 ABCC5O15440 1437 aa13.5□□□□□ -0.25
HCG18-234ENST00000413358 HNRNPMP52272 730 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■□□□□ 10.1
HCG18-234ENST00000413358 PCGF6Q9BYE7 350 aa13.5□□□□□ -0.25
HCG18-234ENST00000413358 TRAPPC8Q9Y2L5 1435 aa13.49□□□□□ -0.25
HCG18-234ENST00000413358 UHRF1BP1Q6BDS2 1440 aa13.48□□□□□ -0.25
HCG18-234ENST00000413358 ADGBQ8N7X0 1667 aa13.48□□□□□ -0.25
HCG18-234ENST00000413358 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
HCG18-234ENST00000413358 SIGLEC1Q9BZZ2 1709 aa13.47□□□□□ -0.25
HCG18-234ENST00000413358 MAST1Q9Y2H9 1570 aa13.47□□□□□ -0.25
HCG18-234ENST00000413358 TSPY4P0CV99 314 aa13.47□□□□□ -0.25
HCG18-234ENST00000413358 TSPY10P0CW01 314 aa13.47□□□□□ -0.25
HCG18-234ENST00000413358 KDM5CP41229 1560 aa13.46□□□□□ -0.25
HCG18-234ENST00000413358 PREX1Q8TCU6 1659 aa13.46□□□□□ -0.26
HCG18-234ENST00000413358 PTPRKQ15262 1439 aa13.46□□□□□ -0.26
HCG18-234ENST00000413358 CHIC2Q9UKJ5 165 aa13.45□□□□□ -0.26
HCG18-234ENST00000413358 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
HCG18-234ENST00000413358 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
HCG18-234ENST00000413358 SPAG9O60271 1321 aaKnown RBP13.44□□□□□ -0.26
HCG18-234ENST00000413358 ADGRL2O95490 1459 aa13.44□□□□□ -0.26
HCG18-234ENST00000413358 MLH3Q9UHC1 1453 aa13.44□□□□□ -0.26
HCG18-234ENST00000413358 ANKRD30AQ9BXX3 1397 aa13.44□□□□□ -0.26
HCG18-234ENST00000413358 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
HCG18-234ENST00000413358 SETD1BQ9UPS6 1966 aaKnown RBP13.43□□□□□ -0.26
HCG18-234ENST00000413358 ROCK1Q13464 1354 aa13.43□□□□□ -0.26
HCG18-234ENST00000413358 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
HCG18-234ENST00000413358 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
HCG18-234ENST00000413358 HFM1A2PYH4 1435 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms