RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 CDK11AQ9UQ88 783 aaPredicted RBP31.53■■■□□ 2.64
CPSF7-204ENST00000413232 ZFYVE16Q7Z3T8 1539 aa31.5■■■□□ 2.63
CPSF7-204ENST00000413232 PCF11O94913 1555 aaKnown RBP31.5■■■□□ 2.63
CPSF7-204ENST00000413232 POGZQ7Z3K3 1410 aa31.49■■■□□ 2.63
CPSF7-204ENST00000413232 EFCAB2Q5VUJ9 269 aa31.47■■■□□ 2.63
CPSF7-204ENST00000413232 RIMS1Q86UR5 1692 aaKnown RBP31.46■■■□□ 2.63
CPSF7-204ENST00000413232 MAGI2Q86UL8 1455 aa31.46■■■□□ 2.63
CPSF7-204ENST00000413232 CASKIN1Q8WXD9 1431 aa31.45■■■□□ 2.63
CPSF7-204ENST00000413232 CDC42BPBQ9Y5S2 1711 aa31.43■■■□□ 2.62
CPSF7-204ENST00000413232 ILDR1Q86SU0 546 aaPredicted RBP31.42■■■□□ 2.62
CPSF7-204ENST00000413232 CLIP1P30622 1438 aa31.41■■■□□ 2.62
CPSF7-204ENST00000413232 ARHGAP5Q13017 1502 aa31.4■■■□□ 2.62
CPSF7-204ENST00000413232 CCDC18Q5T9S5 1454 aa31.36■■■□□ 2.61
CPSF7-204ENST00000413232 MLECQ14165 292 aa31.34■■■□□ 2.61
CPSF7-204ENST00000413232 AFAP1Q8N556 730 aa31.34■■■□□ 2.61
CPSF7-204ENST00000413232 ATP10AO60312 1499 aa31.33■■■□□ 2.61
CPSF7-204ENST00000413232 PREX2Q70Z35 1606 aa31.31■■■□□ 2.6
CPSF7-204ENST00000413232 FYCO1Q9BQS8 1478 aa31.31■■■□□ 2.6
CPSF7-204ENST00000413232 KDM5CP41229 1560 aa31.3■■■□□ 2.6
CPSF7-204ENST00000413232 ZNF518AQ6AHZ1 1483 aa31.3■■■□□ 2.6
CPSF7-204ENST00000413232 LMTK3Q96Q04 1460 aa31.3■■■□□ 2.6
CPSF7-204ENST00000413232 FER1L4A9Z1Z3 1794 aa31.3■■■□□ 2.6
CPSF7-204ENST00000413232 PLPPR3Q6T4P5 718 aa31.29■■■□□ 2.6
CPSF7-204ENST00000413232 CDC42BPAQ5VT25 1732 aa31.29■■■□□ 2.6
CPSF7-204ENST00000413232 C9orf84Q5VXU9 1444 aa31.27■■■□□ 2.6
CPSF7-204ENST00000413232 ARHGEF12Q9NZN5 1544 aa31.27■■■□□ 2.6
CPSF7-204ENST00000413232 ABCC1P33527 1531 aa31.23■■■□□ 2.59
CPSF7-204ENST00000413232 TRAPPC8Q9Y2L5 1435 aa31.23■■■□□ 2.59
CPSF7-204ENST00000413232 ITSN2Q9NZM3 1697 aa31.21■■■□□ 2.59
CPSF7-204ENST00000413232 DIP2CQ9Y2E4 1556 aa31.21■■■□□ 2.59
CPSF7-204ENST00000413232 ABCA6Q8N139 1617 aa31.18■■■□□ 2.58
CPSF7-204ENST00000413232 MLH3Q9UHC1 1453 aa31.16■■■□□ 2.58
CPSF7-204ENST00000413232 HSPA2P54652 639 aa31.16■■■□□ 2.58
CPSF7-204ENST00000413232 MYT1LQ9UL68 1186 aa31.16■■■□□ 2.58
CPSF7-204ENST00000413232 GPATCH8Q9UKJ3 1502 aaKnown RBP31.13■■■□□ 2.57
CPSF7-204ENST00000413232 KIDINS220Q9ULH0 1771 aa31.12■■■□□ 2.57
CPSF7-204ENST00000413232 SAMD9LQ8IVG5 1584 aa31.12■■■□□ 2.57
CPSF7-204ENST00000413232 CEBPAP49715 358 aaPredicted RBP31.11■■■□□ 2.57
CPSF7-204ENST00000413232 REREQ9P2R6 1566 aa31.11■■■□□ 2.57
CPSF7-204ENST00000413232 ZNF777Q9ULD5 760 aaPredicted RBP31.09■■■□□ 2.57
CPSF7-204ENST00000413232 SYCP2Q9BX26 1530 aa31.04■■■□□ 2.56
CPSF7-204ENST00000413232 HNRNPMP52272 730 aaKnown RBP eCLIP31.02■■■□□ 2.56
CPSF7-204ENST00000413232 AGLP35573 1532 aa31.01■■■□□ 2.55
CPSF7-204ENST00000413232 CEP162Q5TB80 1403 aa31■■■□□ 2.55
CPSF7-204ENST00000413232 PREX1Q8TCU6 1659 aa31■■■□□ 2.55
CPSF7-204ENST00000413232 MTUS2Q5JR59 1369 aa30.99■■■□□ 2.55
CPSF7-204ENST00000413232 SETD1BQ9UPS6 1966 aaKnown RBP30.99■■■□□ 2.55
CPSF7-204ENST00000413232 CCNB3Q8WWL7 1395 aa30.97■■■□□ 2.55
CPSF7-204ENST00000413232 CFDP1Q9UEE9 299 aaPredicted RBP30.97■■■□□ 2.55
CPSF7-204ENST00000413232 C3P01024 1663 aa30.97■■■□□ 2.55
CPSF7-204ENST00000413232 KIAA1107Q9UPP5 1409 aa30.93■■■□□ 2.54
CPSF7-204ENST00000413232 TIAM1Q13009 1591 aa30.92■■■□□ 2.54
CPSF7-204ENST00000413232 SPAG9O60271 1321 aaKnown RBP30.92■■■□□ 2.54
CPSF7-204ENST00000413232 FBXO41Q8TF61 875 aa30.91■■■□□ 2.54
CPSF7-204ENST00000413232 ZNF644Q9H582 1327 aaPredicted RBP30.91■■■□□ 2.54
CPSF7-204ENST00000413232 SUPT6HQ7KZ85 1726 aaKnown RBP30.9■■■□□ 2.54
CPSF7-204ENST00000413232 EHBP1L1Q8N3D4 1523 aa30.89■■■□□ 2.54
CPSF7-204ENST00000413232 ATP7AQ04656 1500 aa30.88■■■□□ 2.53
CPSF7-204ENST00000413232 INO80Q9ULG1 1556 aaPredicted RBP30.88■■■□□ 2.53
CPSF7-204ENST00000413232 PLEKHH2Q8IVE3 1493 aa30.88■■■□□ 2.53
CPSF7-204ENST00000413232 LOC105371045A0A1W2PR82 267 aa30.86■■■□□ 2.53
CPSF7-204ENST00000413232 STRCQ7RTU9 1775 aa30.86■■■□□ 2.53
CPSF7-204ENST00000413232 UHRF1BP1Q6BDS2 1440 aa30.82■■■□□ 2.52
CPSF7-204ENST00000413232 ESF1Q9H501 851 aaKnown RBP30.82■■■□□ 2.52
CPSF7-204ENST00000413232 PLXNC1O60486 1568 aa30.81■■■□□ 2.52
CPSF7-204ENST00000413232 MBD5Q9P267 1494 aa30.81■■■□□ 2.52
CPSF7-204ENST00000413232 A2MP01023 1474 aa30.78■■■□□ 2.52
CPSF7-204ENST00000413232 CNTLNQ9NXG0 1405 aa30.77■■■□□ 2.52
CPSF7-204ENST00000413232 MROH2AA6NES4 1674 aa30.75■■■□□ 2.51
CPSF7-204ENST00000413232 NCOA2Q15596 1464 aa30.75■■■□□ 2.51
CPSF7-204ENST00000413232 CLTCQ00610 1675 aaKnown RBP30.73■■■□□ 2.51
CPSF7-204ENST00000413232 ADGBQ8N7X0 1667 aa30.73■■■□□ 2.51
CPSF7-204ENST00000413232 ZMYM3Q14202 1370 aa30.72■■■□□ 2.51
CPSF7-204ENST00000413232 CERKQ8TCT0 537 aa30.69■■■□□ 2.5
CPSF7-204ENST00000413232 GGT6Q6P531 493 aa30.68■■■□□ 2.5
CPSF7-204ENST00000413232 VPS8Q8N3P4 1428 aa30.67■■■□□ 2.5
CPSF7-204ENST00000413232 RTEL1-TNFRSF6BF6WH68 1400 aa30.65■■■□□ 2.5
CPSF7-204ENST00000413232 CAMSAP2Q08AD1 1489 aa30.65■■■□□ 2.5
CPSF7-204ENST00000413232 NPATQ14207 1427 aa30.64■■■□□ 2.49
CPSF7-204ENST00000413232 DMRT2Q9Y5R5 561 aa30.62■■■□□ 2.49
CPSF7-204ENST00000413232 LRRC9Q6ZRR7 1453 aa30.61■■■□□ 2.49
CPSF7-204ENST00000413232 CCDC141Q6ZP82 1450 aa30.6■■■□□ 2.49
CPSF7-204ENST00000413232 DHX29Q7Z478 1369 aaKnown RBP30.59■■■□□ 2.49
CPSF7-204ENST00000413232 PTPRKQ15262 1439 aa30.58■■■□□ 2.49
CPSF7-204ENST00000413232 KANK4Q5T7N3 995 aaPredicted RBP30.58■■■□□ 2.49
CPSF7-204ENST00000413232 PTPRTO14522 1441 aa30.56■■■□□ 2.48
CPSF7-204ENST00000413232 NCOA1Q15788 1441 aa30.56■■■□□ 2.48
CPSF7-204ENST00000413232 CAMSAP1Q5T5Y3 1602 aa30.55■■■□□ 2.48
CPSF7-204ENST00000413232 MYO3AQ8NEV4 1616 aa30.54■■■□□ 2.48
CPSF7-204ENST00000413232 PPP6R1Q9UPN7 881 aa30.53■■■□□ 2.48
CPSF7-204ENST00000413232 ARHGEF5Q12774 1597 aa30.53■■■□□ 2.48
CPSF7-204ENST00000413232 RSPH4AQ5TD94 716 aa30.52■■■□□ 2.48
CPSF7-204ENST00000413232 KIF3BO15066 747 aa30.51■■■□□ 2.47
CPSF7-204ENST00000413232 ZNF142P52746 1687 aaPredicted RBP30.51■■■□□ 2.47
CPSF7-204ENST00000413232 MAP3K1Q13233 1512 aa30.49■■■□□ 2.47
CPSF7-204ENST00000413232 CEP170BQ9Y4F5 1589 aaPredicted RBP30.46■■■□□ 2.47
CPSF7-204ENST00000413232 NCKAP5LQ9HCH0 1330 aa30.46■■■□□ 2.47
CPSF7-204ENST00000413232 LTBP4Q8N2S1 1624 aa30.45■■■□□ 2.47
CPSF7-204ENST00000413232 TSPY4P0CV99 314 aa30.42■■■□□ 2.46
CPSF7-204ENST00000413232 TSPY10P0CW01 314 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms