RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 CCNB3Q8WWL7 1395 aa16.34■□□□□ 0.21
SMARCAL1-204ENST00000412913 MIA2Q96PC5 1412 aa16.34■□□□□ 0.21
SMARCAL1-204ENST00000412913 CROCC2H7BZ55 1655 aa16.31■□□□□ 0.2
SMARCAL1-204ENST00000412913 CFAP74Q9C0B2 1584 aa16.31■□□□□ 0.2
SMARCAL1-204ENST00000412913 CAMSAP2Q08AD1 1489 aa16.31■□□□□ 0.2
SMARCAL1-204ENST00000412913 PLCH2O75038 1416 aa16.31■□□□□ 0.2
SMARCAL1-204ENST00000412913 ARHGAP5Q13017 1502 aa16.3■□□□□ 0.2
SMARCAL1-204ENST00000412913 ABCC1P33527 1531 aa16.29■□□□□ 0.2
SMARCAL1-204ENST00000412913 KCNH8Q96L42 1107 aa16.29■□□□□ 0.2
SMARCAL1-204ENST00000412913 DNMT1P26358 1616 aaKnown RBP16.28■□□□□ 0.2
SMARCAL1-204ENST00000412913 TSPOAP1O95153 1857 aa16.27■□□□□ 0.2
SMARCAL1-204ENST00000412913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMARCAL1-204ENST00000412913 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
SMARCAL1-204ENST00000412913 CD109Q6YHK3 1445 aa16.25■□□□□ 0.19
SMARCAL1-204ENST00000412913 ARHGEF5Q12774 1597 aa16.25■□□□□ 0.19
SMARCAL1-204ENST00000412913 FANCAO15360 1455 aa16.24■□□□□ 0.19
SMARCAL1-204ENST00000412913 ARHGEF12Q9NZN5 1544 aa16.22■□□□□ 0.19
SMARCAL1-204ENST00000412913 MBD5Q9P267 1494 aa16.21■□□□□ 0.19
SMARCAL1-204ENST00000412913 ADGBQ8N7X0 1667 aa16.21■□□□□ 0.18
SMARCAL1-204ENST00000412913 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
SMARCAL1-204ENST00000412913 CFDP1Q9UEE9 299 aaPredicted RBP16.2■□□□□ 0.18
SMARCAL1-204ENST00000412913 NEO1Q92859 1461 aa16.2■□□□□ 0.18
SMARCAL1-204ENST00000412913 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
SMARCAL1-204ENST00000412913 PLEKHH2Q8IVE3 1493 aa16.19■□□□□ 0.18
SMARCAL1-204ENST00000412913 FAM69CQ0P6D2 419 aa16.19■□□□□ 0.18
SMARCAL1-204ENST00000412913 RICTORQ6R327 1708 aa16.19■□□□□ 0.18
SMARCAL1-204ENST00000412913 FRMPD1Q5SYB0 1578 aa16.18■□□□□ 0.18
SMARCAL1-204ENST00000412913 DAPK1P53355 1430 aa16.18■□□□□ 0.18
SMARCAL1-204ENST00000412913 PTPRKQ15262 1439 aa16.18■□□□□ 0.18
SMARCAL1-204ENST00000412913 KIAA1107Q9UPP5 1409 aa16.18■□□□□ 0.18
SMARCAL1-204ENST00000412913 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
SMARCAL1-204ENST00000412913 ADGRL1O94910 1474 aa16.17■□□□□ 0.18
SMARCAL1-204ENST00000412913 TEX14Q8IWB6 1497 aa16.16■□□□□ 0.18
SMARCAL1-204ENST00000412913 SHANK2Q9UPX8 1470 aa16.16■□□□□ 0.18
SMARCAL1-204ENST00000412913 ABCC5O15440 1437 aa16.16■□□□□ 0.18
SMARCAL1-204ENST00000412913 AKNAQ7Z591 1439 aa16.16■□□□□ 0.18
SMARCAL1-204ENST00000412913 KDM5CP41229 1560 aa16.16■□□□□ 0.18
SMARCAL1-204ENST00000412913 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
SMARCAL1-204ENST00000412913 GCC2Q8IWJ2 1684 aa16.15■□□□□ 0.18
SMARCAL1-204ENST00000412913 INO80Q9ULG1 1556 aaPredicted RBP16.15■□□□□ 0.18
SMARCAL1-204ENST00000412913 FAM50AQ14320 339 aaKnown RBP16.13■□□□□ 0.17
SMARCAL1-204ENST00000412913 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
SMARCAL1-204ENST00000412913 ZNF777Q9ULD5 760 aaPredicted RBP16.13■□□□□ 0.17
SMARCAL1-204ENST00000412913 ZFYVE16Q7Z3T8 1539 aa16.13■□□□□ 0.17
SMARCAL1-204ENST00000412913 POGZQ7Z3K3 1410 aa16.12■□□□□ 0.17
SMARCAL1-204ENST00000412913 TRAPPC8Q9Y2L5 1435 aa16.12■□□□□ 0.17
SMARCAL1-204ENST00000412913 ADGRL2O95490 1459 aa16.12■□□□□ 0.17
SMARCAL1-204ENST00000412913 PLXNC1O60486 1568 aa16.12■□□□□ 0.17
SMARCAL1-204ENST00000412913 KIDINS220Q9ULH0 1771 aa16.1■□□□□ 0.17
SMARCAL1-204ENST00000412913 SCAPERQ9BY12 1400 aa16.1■□□□□ 0.17
SMARCAL1-204ENST00000412913 ZMYM4Q5VZL5 1548 aa16.09■□□□□ 0.17
SMARCAL1-204ENST00000412913 HECW2Q9P2P5 1572 aa16.09■□□□□ 0.17
SMARCAL1-204ENST00000412913 ZNF518AQ6AHZ1 1483 aa16.09■□□□□ 0.17
SMARCAL1-204ENST00000412913 C9orf84Q5VXU9 1444 aa16.08■□□□□ 0.16
SMARCAL1-204ENST00000412913 ATP7AQ04656 1500 aa16.08■□□□□ 0.16
SMARCAL1-204ENST00000412913 HNRNPMP52272 730 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMARCAL1-204ENST00000412913 DENND4BO75064 1496 aaPredicted RBP16.06■□□□□ 0.16
SMARCAL1-204ENST00000412913 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
SMARCAL1-204ENST00000412913 ABCA6Q8N139 1617 aa16.05■□□□□ 0.16
SMARCAL1-204ENST00000412913 COL17A1Q9UMD9 1497 aaPredicted RBP16.05■□□□□ 0.16
SMARCAL1-204ENST00000412913 ROCK1Q13464 1354 aa16.04■□□□□ 0.16
SMARCAL1-204ENST00000412913 KDM6BO15054 1643 aa16.04■□□□□ 0.16
SMARCAL1-204ENST00000412913 HFM1A2PYH4 1435 aa16.03■□□□□ 0.16
SMARCAL1-204ENST00000412913 ITGAEP38570 1179 aa16.03■□□□□ 0.16
SMARCAL1-204ENST00000412913 DIP2CQ9Y2E4 1556 aa16.02■□□□□ 0.16
SMARCAL1-204ENST00000412913 MLH3Q9UHC1 1453 aa16.02■□□□□ 0.15
SMARCAL1-204ENST00000412913 RTEL1-TNFRSF6BF6WH68 1400 aa16.02■□□□□ 0.15
SMARCAL1-204ENST00000412913 NAIPQ13075 1403 aa16.02■□□□□ 0.15
SMARCAL1-204ENST00000412913 NCOA1Q15788 1441 aa16.02■□□□□ 0.15
SMARCAL1-204ENST00000412913 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
SMARCAL1-204ENST00000412913 RSPH4AQ5TD94 716 aa16■□□□□ 0.15
SMARCAL1-204ENST00000412913 ARHGEF40Q8TER5 1519 aa15.99■□□□□ 0.15
SMARCAL1-204ENST00000412913 AFAP1Q8N556 730 aa15.98■□□□□ 0.15
SMARCAL1-204ENST00000412913 EIF2AK4Q9P2K8 1649 aaKnown RBP15.97■□□□□ 0.15
SMARCAL1-204ENST00000412913 BCORL1Q5H9F3 1711 aa15.97■□□□□ 0.15
SMARCAL1-204ENST00000412913 SIGLEC1Q9BZZ2 1709 aa15.97■□□□□ 0.15
SMARCAL1-204ENST00000412913 DUOX2Q9NRD8 1548 aa15.96■□□□□ 0.15
SMARCAL1-204ENST00000412913 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
SMARCAL1-204ENST00000412913 ANKRD30AQ9BXX3 1397 aa15.96■□□□□ 0.15
SMARCAL1-204ENST00000412913 RAPGEF3O95398 923 aa15.95■□□□□ 0.14
SMARCAL1-204ENST00000412913 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
SMARCAL1-204ENST00000412913 MAGI2Q86UL8 1455 aa15.95■□□□□ 0.14
SMARCAL1-204ENST00000412913 REREQ9P2R6 1566 aa15.95■□□□□ 0.14
SMARCAL1-204ENST00000412913 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
SMARCAL1-204ENST00000412913 SETD5Q9C0A6 1442 aa15.94■□□□□ 0.14
SMARCAL1-204ENST00000412913 YEATS2Q9ULM3 1422 aa15.94■□□□□ 0.14
SMARCAL1-204ENST00000412913 UNC13BO14795 1591 aa15.94■□□□□ 0.14
SMARCAL1-204ENST00000412913 DEPDC5O75140 1603 aa15.94■□□□□ 0.14
SMARCAL1-204ENST00000412913 RAB3GAP2Q9H2M9 1393 aa15.92■□□□□ 0.14
SMARCAL1-204ENST00000412913 TSPY4P0CV99 314 aa15.92■□□□□ 0.14
SMARCAL1-204ENST00000412913 TSPY10P0CW01 314 aa15.92■□□□□ 0.14
SMARCAL1-204ENST00000412913 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
SMARCAL1-204ENST00000412913 ERBINQ96RT1 1412 aa15.92■□□□□ 0.14
SMARCAL1-204ENST00000412913 MROH1Q8NDA8 1641 aa15.91■□□□□ 0.14
SMARCAL1-204ENST00000412913 RNF17Q9BXT8 1623 aaKnown RBP15.91■□□□□ 0.14
SMARCAL1-204ENST00000412913 ANKRD50Q9ULJ7 1429 aa15.9■□□□□ 0.14
SMARCAL1-204ENST00000412913 A2MP01023 1474 aa15.89■□□□□ 0.13
SMARCAL1-204ENST00000412913 KDM5DQ9BY66 1539 aa15.89■□□□□ 0.13
SMARCAL1-204ENST00000412913 PRDM15P57071 1507 aaPredicted RBP15.88■□□□□ 0.13
SMARCAL1-204ENST00000412913 IQGAP3Q86VI3 1631 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms