RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 ARHGAP5Q13017 1502 aa24.4■■□□□ 1.5
AP001056.1-201ENST00000411956 TSPOAP1O95153 1857 aa24.38■■□□□ 1.49
AP001056.1-201ENST00000411956 CFAP74Q9C0B2 1584 aa24.36■■□□□ 1.49
AP001056.1-201ENST00000411956 FANCAO15360 1455 aa24.34■■□□□ 1.49
AP001056.1-201ENST00000411956 FGD6Q6ZV73 1430 aa24.34■■□□□ 1.49
AP001056.1-201ENST00000411956 MIA2Q96PC5 1412 aa24.34■■□□□ 1.49
AP001056.1-201ENST00000411956 TEX14Q8IWB6 1497 aa24.33■■□□□ 1.49
AP001056.1-201ENST00000411956 SAMD9LQ8IVG5 1584 aa24.33■■□□□ 1.48
AP001056.1-201ENST00000411956 CFDP1Q9UEE9 299 aaPredicted RBP24.31■■□□□ 1.48
AP001056.1-201ENST00000411956 PTPN23Q9H3S7 1636 aa24.31■■□□□ 1.48
AP001056.1-201ENST00000411956 NEO1Q92859 1461 aa24.3■■□□□ 1.48
AP001056.1-201ENST00000411956 CAMSAP2Q08AD1 1489 aa24.29■■□□□ 1.48
AP001056.1-201ENST00000411956 TCOF1Q13428 1488 aaKnown RBP24.28■■□□□ 1.48
AP001056.1-201ENST00000411956 ABCC1P33527 1531 aa24.28■■□□□ 1.48
AP001056.1-201ENST00000411956 EFCAB2Q5VUJ9 269 aa24.27■■□□□ 1.48
AP001056.1-201ENST00000411956 RRBP1Q9P2E9 1410 aaKnown RBP24.27■■□□□ 1.48
AP001056.1-201ENST00000411956 AKNAQ7Z591 1439 aa24.25■■□□□ 1.47
AP001056.1-201ENST00000411956 ZNF777Q9ULD5 760 aaPredicted RBP24.23■■□□□ 1.47
AP001056.1-201ENST00000411956 ADGRL1O94910 1474 aa24.23■■□□□ 1.47
AP001056.1-201ENST00000411956 SYCP2Q9BX26 1530 aa24.23■■□□□ 1.47
AP001056.1-201ENST00000411956 PLEKHH2Q8IVE3 1493 aa24.22■■□□□ 1.47
AP001056.1-201ENST00000411956 ZNF644Q9H582 1327 aaPredicted RBP24.22■■□□□ 1.47
AP001056.1-201ENST00000411956 ARHGEF12Q9NZN5 1544 aa24.2■■□□□ 1.46
AP001056.1-201ENST00000411956 KIAA1107Q9UPP5 1409 aa24.18■■□□□ 1.46
AP001056.1-201ENST00000411956 ARHGEF5Q12774 1597 aa24.16■■□□□ 1.46
AP001056.1-201ENST00000411956 MBD5Q9P267 1494 aa24.16■■□□□ 1.46
AP001056.1-201ENST00000411956 SCAPERQ9BY12 1400 aa24.16■■□□□ 1.46
AP001056.1-201ENST00000411956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.16■■□□□ 1.46
AP001056.1-201ENST00000411956 DNMT1P26358 1616 aaKnown RBP24.14■■□□□ 1.46
AP001056.1-201ENST00000411956 FRMPD1Q5SYB0 1578 aa24.13■■□□□ 1.45
AP001056.1-201ENST00000411956 POGZQ7Z3K3 1410 aa24.13■■□□□ 1.45
AP001056.1-201ENST00000411956 FAM50AQ14320 339 aaKnown RBP24.13■■□□□ 1.45
AP001056.1-201ENST00000411956 DENND4BO75064 1496 aaPredicted RBP24.13■■□□□ 1.45
AP001056.1-201ENST00000411956 RICTORQ6R327 1708 aa24.13■■□□□ 1.45
AP001056.1-201ENST00000411956 CROCC2H7BZ55 1655 aa24.12■■□□□ 1.45
AP001056.1-201ENST00000411956 TRAPPC8Q9Y2L5 1435 aa24.11■■□□□ 1.45
AP001056.1-201ENST00000411956 CCDC141Q6ZP82 1450 aa24.11■■□□□ 1.45
AP001056.1-201ENST00000411956 KDM6BO15054 1643 aa24.1■■□□□ 1.45
AP001056.1-201ENST00000411956 HNRNPMP52272 730 aaKnown RBP eCLIP24.1■■□□□ 1.45
AP001056.1-201ENST00000411956 COL17A1Q9UMD9 1497 aaPredicted RBP24.1■■□□□ 1.45
AP001056.1-201ENST00000411956 KDM5CP41229 1560 aa24.09■■□□□ 1.45
AP001056.1-201ENST00000411956 ZNF518AQ6AHZ1 1483 aa24.09■■□□□ 1.45
AP001056.1-201ENST00000411956 DAPK1P53355 1430 aa24.09■■□□□ 1.45
AP001056.1-201ENST00000411956 ABCC5O15440 1437 aa24.07■■□□□ 1.44
AP001056.1-201ENST00000411956 SHANK2Q9UPX8 1470 aa24.05■■□□□ 1.44
AP001056.1-201ENST00000411956 ZMYM4Q5VZL5 1548 aa24.05■■□□□ 1.44
AP001056.1-201ENST00000411956 MAST1Q9Y2H9 1570 aa24.03■■□□□ 1.44
AP001056.1-201ENST00000411956 HECW2Q9P2P5 1572 aa24.03■■□□□ 1.44
AP001056.1-201ENST00000411956 INO80Q9ULG1 1556 aaPredicted RBP24.03■■□□□ 1.44
AP001056.1-201ENST00000411956 RAPGEF3O95398 923 aa24.02■■□□□ 1.44
AP001056.1-201ENST00000411956 RSPH4AQ5TD94 716 aa24.02■■□□□ 1.44
AP001056.1-201ENST00000411956 ZFYVE16Q7Z3T8 1539 aa24.01■■□□□ 1.43
AP001056.1-201ENST00000411956 AFAP1Q8N556 730 aa24.01■■□□□ 1.43
AP001056.1-201ENST00000411956 PTPRKQ15262 1439 aa24.01■■□□□ 1.43
AP001056.1-201ENST00000411956 C9orf84Q5VXU9 1444 aa24■■□□□ 1.43
AP001056.1-201ENST00000411956 ADGBQ8N7X0 1667 aa23.99■■□□□ 1.43
AP001056.1-201ENST00000411956 ATP7AQ04656 1500 aa23.98■■□□□ 1.43
AP001056.1-201ENST00000411956 MLH3Q9UHC1 1453 aa23.97■■□□□ 1.43
AP001056.1-201ENST00000411956 KIDINS220Q9ULH0 1771 aa23.96■■□□□ 1.43
AP001056.1-201ENST00000411956 ITGAEP38570 1179 aa23.96■■□□□ 1.43
AP001056.1-201ENST00000411956 RTEL1-TNFRSF6BF6WH68 1400 aa23.95■■□□□ 1.42
AP001056.1-201ENST00000411956 SPAG9O60271 1321 aaKnown RBP23.95■■□□□ 1.42
AP001056.1-201ENST00000411956 TRIM26Q12899 539 aaPredicted RBP23.95■■□□□ 1.42
AP001056.1-201ENST00000411956 PLXNC1O60486 1568 aa23.95■■□□□ 1.42
AP001056.1-201ENST00000411956 ADGRL2O95490 1459 aa23.94■■□□□ 1.42
AP001056.1-201ENST00000411956 TSPY4P0CV99 314 aa23.93■■□□□ 1.42
AP001056.1-201ENST00000411956 TSPY10P0CW01 314 aa23.93■■□□□ 1.42
AP001056.1-201ENST00000411956 MAGI2Q86UL8 1455 aa23.93■■□□□ 1.42
AP001056.1-201ENST00000411956 ABCA6Q8N139 1617 aa23.92■■□□□ 1.42
AP001056.1-201ENST00000411956 ARHGEF40Q8TER5 1519 aa23.92■■□□□ 1.42
AP001056.1-201ENST00000411956 DIP2CQ9Y2E4 1556 aa23.91■■□□□ 1.42
AP001056.1-201ENST00000411956 YEATS2Q9ULM3 1422 aa23.9■■□□□ 1.42
AP001056.1-201ENST00000411956 CHIC2Q9UKJ5 165 aa23.89■■□□□ 1.41
AP001056.1-201ENST00000411956 ROCK1Q13464 1354 aa23.89■■□□□ 1.41
AP001056.1-201ENST00000411956 ANKRD30AQ9BXX3 1397 aa23.87■■□□□ 1.41
AP001056.1-201ENST00000411956 NCOA1Q15788 1441 aa23.86■■□□□ 1.41
AP001056.1-201ENST00000411956 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
AP001056.1-201ENST00000411956 GCC2Q8IWJ2 1684 aa23.84■■□□□ 1.41
AP001056.1-201ENST00000411956 KIF15Q9NS87 1388 aa23.83■■□□□ 1.41
AP001056.1-201ENST00000411956 DUOX2Q9NRD8 1548 aa23.81■■□□□ 1.4
AP001056.1-201ENST00000411956 REREQ9P2R6 1566 aa23.81■■□□□ 1.4
AP001056.1-201ENST00000411956 HFM1A2PYH4 1435 aa23.8■■□□□ 1.4
AP001056.1-201ENST00000411956 RRP7BPQ9NSQ0 103 aa23.79■■□□□ 1.4
AP001056.1-201ENST00000411956 ATP10AO60312 1499 aa23.79■■□□□ 1.4
AP001056.1-201ENST00000411956 A2MP01023 1474 aa23.79■■□□□ 1.4
AP001056.1-201ENST00000411956 NAIPQ13075 1403 aa23.78■■□□□ 1.4
AP001056.1-201ENST00000411956 AEBP2Q6ZN18 517 aaPredicted RBP23.76■■□□□ 1.39
AP001056.1-201ENST00000411956 SIGLEC1Q9BZZ2 1709 aa23.76■■□□□ 1.39
AP001056.1-201ENST00000411956 ERBINQ96RT1 1412 aa23.75■■□□□ 1.39
AP001056.1-201ENST00000411956 EIF2AK4Q9P2K8 1649 aaKnown RBP23.74■■□□□ 1.39
AP001056.1-201ENST00000411956 DHX29Q7Z478 1369 aaKnown RBP23.74■■□□□ 1.39
AP001056.1-201ENST00000411956 ANKRD50Q9ULJ7 1429 aa23.73■■□□□ 1.39
AP001056.1-201ENST00000411956 BCORL1Q5H9F3 1711 aa23.71■■□□□ 1.39
AP001056.1-201ENST00000411956 PCGF6Q9BYE7 350 aa23.71■■□□□ 1.39
AP001056.1-201ENST00000411956 AGLP35573 1532 aa23.7■■□□□ 1.38
AP001056.1-201ENST00000411956 SETD5Q9C0A6 1442 aa23.69■■□□□ 1.38
AP001056.1-201ENST00000411956 RNF17Q9BXT8 1623 aaKnown RBP23.66■■□□□ 1.38
AP001056.1-201ENST00000411956 DEPDC5O75140 1603 aa23.65■■□□□ 1.38
AP001056.1-201ENST00000411956 UNC13BO14795 1591 aa23.64■■□□□ 1.37
AP001056.1-201ENST00000411956 RAB3GAP2Q9H2M9 1393 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms