RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 FGD6Q6ZV73 1430 aa28.54■■■□□ 2.16
CDC42-204ENST00000411827 CDC42BPAQ5VT25 1732 aa28.53■■■□□ 2.16
CDC42-204ENST00000411827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.52■■■□□ 2.16
CDC42-204ENST00000411827 TEX14Q8IWB6 1497 aa28.51■■■□□ 2.15
CDC42-204ENST00000411827 RRBP1Q9P2E9 1410 aaKnown RBP28.51■■■□□ 2.15
CDC42-204ENST00000411827 ARHGAP5Q13017 1502 aa28.5■■■□□ 2.15
CDC42-204ENST00000411827 PLEKHH2Q8IVE3 1493 aa28.49■■■□□ 2.15
CDC42-204ENST00000411827 KIF13AQ9H1H9 1805 aa28.49■■■□□ 2.15
CDC42-204ENST00000411827 CFAP74Q9C0B2 1584 aa28.49■■■□□ 2.15
CDC42-204ENST00000411827 NEO1Q92859 1461 aa28.47■■■□□ 2.15
CDC42-204ENST00000411827 FANCAO15360 1455 aa28.46■■■□□ 2.15
CDC42-204ENST00000411827 CDC42BPBQ9Y5S2 1711 aa28.46■■■□□ 2.15
CDC42-204ENST00000411827 TCOF1Q13428 1488 aaKnown RBP28.45■■■□□ 2.14
CDC42-204ENST00000411827 RSPH4AQ5TD94 716 aa28.44■■■□□ 2.14
CDC42-204ENST00000411827 KIAA1107Q9UPP5 1409 aa28.43■■■□□ 2.14
CDC42-204ENST00000411827 PTPN23Q9H3S7 1636 aa28.41■■■□□ 2.14
CDC42-204ENST00000411827 ZNF777Q9ULD5 760 aaPredicted RBP28.39■■■□□ 2.14
CDC42-204ENST00000411827 TRIM26Q12899 539 aaPredicted RBP28.38■■■□□ 2.13
CDC42-204ENST00000411827 AKNAQ7Z591 1439 aa28.37■■■□□ 2.13
CDC42-204ENST00000411827 CAMSAP2Q08AD1 1489 aa28.37■■■□□ 2.13
CDC42-204ENST00000411827 FAM50AQ14320 339 aaKnown RBP28.36■■■□□ 2.13
CDC42-204ENST00000411827 SAMD9LQ8IVG5 1584 aa28.33■■■□□ 2.13
CDC42-204ENST00000411827 ADGRL1O94910 1474 aa28.32■■■□□ 2.12
CDC42-204ENST00000411827 ZNF644Q9H582 1327 aaPredicted RBP28.31■■■□□ 2.12
CDC42-204ENST00000411827 ABCC1P33527 1531 aa28.31■■■□□ 2.12
CDC42-204ENST00000411827 PPRC1Q5VV67 1664 aaKnown RBP28.3■■■□□ 2.12
CDC42-204ENST00000411827 ARHGEF5Q12774 1597 aa28.29■■■□□ 2.12
CDC42-204ENST00000411827 MBD5Q9P267 1494 aa28.27■■■□□ 2.12
CDC42-204ENST00000411827 TSPOAP1O95153 1857 aa28.27■■■□□ 2.12
CDC42-204ENST00000411827 SCAPERQ9BY12 1400 aa28.27■■■□□ 2.12
CDC42-204ENST00000411827 DENND4BO75064 1496 aaPredicted RBP28.24■■■□□ 2.11
CDC42-204ENST00000411827 CCDC141Q6ZP82 1450 aa28.24■■■□□ 2.11
CDC42-204ENST00000411827 TSPY4P0CV99 314 aa28.24■■■□□ 2.11
CDC42-204ENST00000411827 TSPY10P0CW01 314 aa28.24■■■□□ 2.11
CDC42-204ENST00000411827 SYCP2Q9BX26 1530 aa28.23■■■□□ 2.11
CDC42-204ENST00000411827 HNRNPMP52272 730 aaKnown RBP eCLIP28.23■■■□□ 2.114e-7■■□□□ 11.8
CDC42-204ENST00000411827 ZNF518AQ6AHZ1 1483 aa28.22■■■□□ 2.11
CDC42-204ENST00000411827 DNMT1P26358 1616 aaKnown RBP28.22■■■□□ 2.11
CDC42-204ENST00000411827 DAPK1P53355 1430 aa28.21■■■□□ 2.11
CDC42-204ENST00000411827 SHANK2Q9UPX8 1470 aa28.21■■■□□ 2.11
CDC42-204ENST00000411827 POGZQ7Z3K3 1410 aa28.19■■■□□ 2.1
CDC42-204ENST00000411827 ARHGEF12Q9NZN5 1544 aa28.19■■■□□ 2.1
CDC42-204ENST00000411827 ABCC5O15440 1437 aa28.18■■■□□ 2.1
CDC42-204ENST00000411827 RTEL1-TNFRSF6BF6WH68 1400 aa28.15■■■□□ 2.1
CDC42-204ENST00000411827 TRAPPC8Q9Y2L5 1435 aa28.15■■■□□ 2.1
CDC42-204ENST00000411827 SPAG9O60271 1321 aaKnown RBP28.13■■■□□ 2.09
CDC42-204ENST00000411827 ROCK1Q13464 1354 aa28.12■■■□□ 2.09
CDC42-204ENST00000411827 MAST1Q9Y2H9 1570 aa28.11■■■□□ 2.09
CDC42-204ENST00000411827 AFAP1Q8N556 730 aa28.11■■■□□ 2.09
CDC42-204ENST00000411827 KDM5CP41229 1560 aa28.11■■■□□ 2.09
CDC42-204ENST00000411827 C9orf84Q5VXU9 1444 aa28.1■■■□□ 2.09
CDC42-204ENST00000411827 MAGI2Q86UL8 1455 aa28.1■■■□□ 2.09
CDC42-204ENST00000411827 MLH3Q9UHC1 1453 aa28.09■■■□□ 2.09
CDC42-204ENST00000411827 ITGAEP38570 1179 aa28.09■■■□□ 2.09
CDC42-204ENST00000411827 CROCC2H7BZ55 1655 aa28.09■■■□□ 2.09
CDC42-204ENST00000411827 ANKRD30AQ9BXX3 1397 aa28.09■■■□□ 2.09
CDC42-204ENST00000411827 ADGRL2O95490 1459 aa28.08■■■□□ 2.09
CDC42-204ENST00000411827 RAPGEF3O95398 923 aa28.07■■■□□ 2.08
CDC42-204ENST00000411827 ZMYM4Q5VZL5 1548 aa28.07■■■□□ 2.08
CDC42-204ENST00000411827 RICTORQ6R327 1708 aa28.06■■■□□ 2.08
CDC42-204ENST00000411827 PTPRKQ15262 1439 aa28.04■■■□□ 2.08
CDC42-204ENST00000411827 ACIN1Q9UKV3 1341 aaKnown RBP28.03■■■□□ 2.08
CDC42-204ENST00000411827 NCOA1Q15788 1441 aa28.02■■■□□ 2.08
CDC42-204ENST00000411827 KDM6BO15054 1643 aa28.02■■■□□ 2.08
CDC42-204ENST00000411827 COL17A1Q9UMD9 1497 aaPredicted RBP28.02■■■□□ 2.08
CDC42-204ENST00000411827 HECW2Q9P2P5 1572 aa28.01■■■□□ 2.07
CDC42-204ENST00000411827 ATP7AQ04656 1500 aa28.01■■■□□ 2.07
CDC42-204ENST00000411827 INO80Q9ULG1 1556 aaPredicted RBP28■■■□□ 2.07
CDC42-204ENST00000411827 ADGBQ8N7X0 1667 aa28■■■□□ 2.07
CDC42-204ENST00000411827 PLXNC1O60486 1568 aa27.99■■■□□ 2.07
CDC42-204ENST00000411827 FRMPD1Q5SYB0 1578 aa27.99■■■□□ 2.07
CDC42-204ENST00000411827 ZFYVE16Q7Z3T8 1539 aa27.99■■■□□ 2.07
CDC42-204ENST00000411827 CHIC2Q9UKJ5 165 aa27.99■■■□□ 2.07
CDC42-204ENST00000411827 MYT1LQ9UL68 1186 aa27.99■■■□□ 2.07
CDC42-204ENST00000411827 HFM1A2PYH4 1435 aa27.98■■■□□ 2.07
CDC42-204ENST00000411827 PCGF6Q9BYE7 350 aa27.97■■■□□ 2.07
CDC42-204ENST00000411827 KIF15Q9NS87 1388 aa27.94■■■□□ 2.06
CDC42-204ENST00000411827 KIDINS220Q9ULH0 1771 aa27.92■■■□□ 2.06
CDC42-204ENST00000411827 HRCP23327 699 aa27.92■■■□□ 2.06
CDC42-204ENST00000411827 RRP7BPQ9NSQ0 103 aa27.91■■■□□ 2.06
CDC42-204ENST00000411827 DUOX2Q9NRD8 1548 aa27.91■■■□□ 2.06
CDC42-204ENST00000411827 NAIPQ13075 1403 aa27.9■■■□□ 2.06
CDC42-204ENST00000411827 SETD5Q9C0A6 1442 aa27.89■■■□□ 2.06
CDC42-204ENST00000411827 DHX29Q7Z478 1369 aaKnown RBP27.87■■■□□ 2.05
CDC42-204ENST00000411827 ATP10AO60312 1499 aa27.87■■■□□ 2.05
CDC42-204ENST00000411827 ERBINQ96RT1 1412 aa27.86■■■□□ 2.05
CDC42-204ENST00000411827 ANKRD50Q9ULJ7 1429 aa27.85■■■□□ 2.05
CDC42-204ENST00000411827 GCC2Q8IWJ2 1684 aa27.84■■■□□ 2.05
CDC42-204ENST00000411827 A2MP01023 1474 aa27.84■■■□□ 2.05
CDC42-204ENST00000411827 REREQ9P2R6 1566 aa27.84■■■□□ 2.05
CDC42-204ENST00000411827 ARHGEF40Q8TER5 1519 aa27.83■■■□□ 2.05
CDC42-204ENST00000411827 DIP2CQ9Y2E4 1556 aa27.82■■■□□ 2.04
CDC42-204ENST00000411827 YEATS2Q9ULM3 1422 aa27.82■■■□□ 2.04
CDC42-204ENST00000411827 ABCA6Q8N139 1617 aa27.81■■■□□ 2.04
CDC42-204ENST00000411827 KDM4FA0A1W2PPD8 638 aa27.77■■■□□ 2.04
CDC42-204ENST00000411827 EIF2AK4Q9P2K8 1649 aaKnown RBP27.77■■■□□ 2.04
CDC42-204ENST00000411827 RAB3GAP2Q9H2M9 1393 aa27.75■■■□□ 2.03
CDC42-204ENST00000411827 AGLP35573 1532 aa27.75■■■□□ 2.03
CDC42-204ENST00000411827 BCORL1Q5H9F3 1711 aa27.71■■■□□ 2.03
CDC42-204ENST00000411827 PPP6R1Q9UPN7 881 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms