RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 TIAM1Q13009 1591 aa25.88■■□□□ 1.73
NOD1-202ENST00000411552 CDC42BPAQ5VT25 1732 aa25.88■■□□□ 1.73
NOD1-202ENST00000411552 DENND4BO75064 1496 aaPredicted RBP25.87■■□□□ 1.73
NOD1-202ENST00000411552 ADGRL1O94910 1474 aa25.86■■□□□ 1.73
NOD1-202ENST00000411552 RICTORQ6R327 1708 aa25.86■■□□□ 1.73
NOD1-202ENST00000411552 SCAPERQ9BY12 1400 aa25.83■■□□□ 1.73
NOD1-202ENST00000411552 GPATCH8Q9UKJ3 1502 aaKnown RBP25.82■■□□□ 1.72
NOD1-202ENST00000411552 MAP3K1Q13233 1512 aa25.8■■□□□ 1.72
NOD1-202ENST00000411552 CCNB3Q8WWL7 1395 aa25.79■■□□□ 1.72
NOD1-202ENST00000411552 POGZQ7Z3K3 1410 aa25.79■■□□□ 1.72
NOD1-202ENST00000411552 LRRC9Q6ZRR7 1453 aa25.77■■□□□ 1.72
NOD1-202ENST00000411552 ZMYM4Q5VZL5 1548 aa25.76■■□□□ 1.71
NOD1-202ENST00000411552 SUPT6HQ7KZ85 1726 aaKnown RBP25.76■■□□□ 1.71
NOD1-202ENST00000411552 ABCC1P33527 1531 aa25.74■■□□□ 1.71
NOD1-202ENST00000411552 NCOA2Q15596 1464 aa25.73■■□□□ 1.71
NOD1-202ENST00000411552 KANK4Q5T7N3 995 aaPredicted RBP25.73■■□□□ 1.71
NOD1-202ENST00000411552 SAMD9LQ8IVG5 1584 aa25.72■■□□□ 1.71
NOD1-202ENST00000411552 CFDP1Q9UEE9 299 aaPredicted RBP25.71■■□□□ 1.71
NOD1-202ENST00000411552 ARHGEF40Q8TER5 1519 aa25.71■■□□□ 1.71
NOD1-202ENST00000411552 ARHGEF12Q9NZN5 1544 aa25.71■■□□□ 1.71
NOD1-202ENST00000411552 ZNF518AQ6AHZ1 1483 aa25.71■■□□□ 1.71
NOD1-202ENST00000411552 ITSN2Q9NZM3 1697 aa25.71■■□□□ 1.71
NOD1-202ENST00000411552 ZNF777Q9ULD5 760 aaPredicted RBP25.7■■□□□ 1.7
NOD1-202ENST00000411552 KDM4FA0A1W2PPD8 638 aa25.69■■□□□ 1.7
NOD1-202ENST00000411552 APLP2Q06481 763 aa25.68■■□□□ 1.7
NOD1-202ENST00000411552 MAGI2Q86UL8 1455 aa25.67■■□□□ 1.7
NOD1-202ENST00000411552 KDM5CP41229 1560 aa25.67■■□□□ 1.7
NOD1-202ENST00000411552 AFAP1Q8N556 730 aa25.67■■□□□ 1.7
NOD1-202ENST00000411552 YEATS2Q9ULM3 1422 aa25.67■■□□□ 1.7
NOD1-202ENST00000411552 ZFYVE16Q7Z3T8 1539 aa25.67■■□□□ 1.7
NOD1-202ENST00000411552 TRAPPC8Q9Y2L5 1435 aa25.66■■□□□ 1.7
NOD1-202ENST00000411552 SYCP2Q9BX26 1530 aa25.65■■□□□ 1.7
NOD1-202ENST00000411552 PLEKHH2Q8IVE3 1493 aa25.62■■□□□ 1.69
NOD1-202ENST00000411552 KIAA1107Q9UPP5 1409 aa25.62■■□□□ 1.69
NOD1-202ENST00000411552 ZNF644Q9H582 1327 aaPredicted RBP25.61■■□□□ 1.69
NOD1-202ENST00000411552 HECW2Q9P2P5 1572 aa25.61■■□□□ 1.69
NOD1-202ENST00000411552 HNRNPMP52272 730 aaKnown RBP eCLIP25.6■■□□□ 1.69
NOD1-202ENST00000411552 MLH3Q9UHC1 1453 aa25.57■■□□□ 1.68
NOD1-202ENST00000411552 SIGLEC1Q9BZZ2 1709 aa25.55■■□□□ 1.68
NOD1-202ENST00000411552 ATP10AO60312 1499 aa25.54■■□□□ 1.68
NOD1-202ENST00000411552 MYT1LQ9UL68 1186 aa25.54■■□□□ 1.68
NOD1-202ENST00000411552 ARID4BQ4LE39 1312 aaPredicted RBP25.54■■□□□ 1.68
NOD1-202ENST00000411552 CAMSAP2Q08AD1 1489 aa25.53■■□□□ 1.68
NOD1-202ENST00000411552 KIDINS220Q9ULH0 1771 aa25.53■■□□□ 1.68
NOD1-202ENST00000411552 MYOM3Q5VTT5 1437 aa25.53■■□□□ 1.68
NOD1-202ENST00000411552 DIP2CQ9Y2E4 1556 aa25.52■■□□□ 1.68
NOD1-202ENST00000411552 ABCA6Q8N139 1617 aa25.52■■□□□ 1.68
NOD1-202ENST00000411552 C9orf84Q5VXU9 1444 aa25.52■■□□□ 1.68
NOD1-202ENST00000411552 MBD5Q9P267 1494 aa25.52■■□□□ 1.68
NOD1-202ENST00000411552 BCORL1Q5H9F3 1711 aa25.5■■□□□ 1.67
NOD1-202ENST00000411552 SPAG9O60271 1321 aaKnown RBP25.49■■□□□ 1.67
NOD1-202ENST00000411552 ADAMTSL3P82987 1691 aa25.48■■□□□ 1.67
NOD1-202ENST00000411552 INO80Q9ULG1 1556 aaPredicted RBP25.47■■□□□ 1.67
NOD1-202ENST00000411552 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
NOD1-202ENST00000411552 ATP7AQ04656 1500 aa25.46■■□□□ 1.67
NOD1-202ENST00000411552 REREQ9P2R6 1566 aa25.44■■□□□ 1.66
NOD1-202ENST00000411552 CCDC141Q6ZP82 1450 aa25.43■■□□□ 1.66
NOD1-202ENST00000411552 ARHGEF5Q12774 1597 aa25.42■■□□□ 1.66
NOD1-202ENST00000411552 MADDQ8WXG6 1647 aa25.41■■□□□ 1.66
NOD1-202ENST00000411552 RSPH4AQ5TD94 716 aa25.39■■□□□ 1.66
NOD1-202ENST00000411552 FGD6Q6ZV73 1430 aa25.37■■□□□ 1.65
NOD1-202ENST00000411552 PTPN23Q9H3S7 1636 aa25.37■■□□□ 1.65
NOD1-202ENST00000411552 MLECQ14165 292 aa25.37■■□□□ 1.65
NOD1-202ENST00000411552 RTEL1-TNFRSF6BF6WH68 1400 aa25.37■■□□□ 1.65
NOD1-202ENST00000411552 AGLP35573 1532 aa25.36■■□□□ 1.65
NOD1-202ENST00000411552 RIMS1Q86UR5 1692 aaKnown RBP25.33■■□□□ 1.65
NOD1-202ENST00000411552 PTPRMP28827 1452 aa25.33■■□□□ 1.65
NOD1-202ENST00000411552 ADGBQ8N7X0 1667 aa25.32■■□□□ 1.64
NOD1-202ENST00000411552 FER1L4A9Z1Z3 1794 aa25.32■■□□□ 1.64
NOD1-202ENST00000411552 A2MP01023 1474 aa25.32■■□□□ 1.64
NOD1-202ENST00000411552 TCOF1Q13428 1488 aaKnown RBP25.32■■□□□ 1.64
NOD1-202ENST00000411552 PLXNC1O60486 1568 aa25.31■■□□□ 1.64
NOD1-202ENST00000411552 TSPY4P0CV99 314 aa25.3■■□□□ 1.64
NOD1-202ENST00000411552 TSPY10P0CW01 314 aa25.3■■□□□ 1.64
NOD1-202ENST00000411552 PPARGC1BQ86YN6 1023 aaKnown RBP25.3■■□□□ 1.64
NOD1-202ENST00000411552 MAST1Q9Y2H9 1570 aa25.28■■□□□ 1.64
NOD1-202ENST00000411552 CROCC2H7BZ55 1655 aa25.25■■□□□ 1.63
NOD1-202ENST00000411552 DNMT1P26358 1616 aaKnown RBP25.24■■□□□ 1.63
NOD1-202ENST00000411552 ABCC5O15440 1437 aa25.24■■□□□ 1.63
NOD1-202ENST00000411552 DHX29Q7Z478 1369 aaKnown RBP25.23■■□□□ 1.63
NOD1-202ENST00000411552 DAPK1P53355 1430 aa25.22■■□□□ 1.63
NOD1-202ENST00000411552 SHANK2Q9UPX8 1470 aa25.21■■□□□ 1.63
NOD1-202ENST00000411552 FAM50AQ14320 339 aaKnown RBP25.19■■□□□ 1.62
NOD1-202ENST00000411552 PLPPR3Q6T4P5 718 aa25.16■■□□□ 1.62
NOD1-202ENST00000411552 ESF1Q9H501 851 aaKnown RBP25.14■■□□□ 1.62
NOD1-202ENST00000411552 GGT6Q6P531 493 aa25.13■■□□□ 1.61
NOD1-202ENST00000411552 CNTLNQ9NXG0 1405 aa25.12■■□□□ 1.61
NOD1-202ENST00000411552 KIF3BO15066 747 aa25.12■■□□□ 1.61
NOD1-202ENST00000411552 CEBPAP49715 358 aaPredicted RBP25.11■■□□□ 1.61
NOD1-202ENST00000411552 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
NOD1-202ENST00000411552 CHIC2Q9UKJ5 165 aa25.1■■□□□ 1.61
NOD1-202ENST00000411552 C3P01024 1663 aa25.1■■□□□ 1.61
NOD1-202ENST00000411552 DUOX2Q9NRD8 1548 aa25.09■■□□□ 1.61
NOD1-202ENST00000411552 CLTCQ00610 1675 aaKnown RBP25.09■■□□□ 1.61
NOD1-202ENST00000411552 RRP7BPQ9NSQ0 103 aa25.08■■□□□ 1.61
NOD1-202ENST00000411552 MROH2AA6NES4 1674 aa25.07■■□□□ 1.6
NOD1-202ENST00000411552 PPP6R1Q9UPN7 881 aa25.07■■□□□ 1.6
NOD1-202ENST00000411552 EIF2AK4Q9P2K8 1649 aaKnown RBP25.07■■□□□ 1.6
NOD1-202ENST00000411552 ANKRD30AQ9BXX3 1397 aa25.06■■□□□ 1.6
NOD1-202ENST00000411552 NCOA1Q15788 1441 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms