RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 DOK7Q18PE1 504 aa5.92□□□□□ -1.46
RNU4-43P-201ENST00000410628 TRIM41Q8WV44 630 aa5.9□□□□□ -1.46
RNU4-43P-201ENST00000410628 IRX2Q9BZI1 471 aaPredicted RBP5.9□□□□□ -1.46
RNU4-43P-201ENST00000410628 VGFO15240 615 aaPredicted RBP5.89□□□□□ -1.47
RNU4-43P-201ENST00000410628 ARSIQ5FYB1 569 aa5.89□□□□□ -1.47
RNU4-43P-201ENST00000410628 BCL11BQ9C0K0 894 aaPredicted RBP5.89□□□□□ -1.47
RNU4-43P-201ENST00000410628 SOX12O15370 315 aa5.88□□□□□ -1.47
RNU4-43P-201ENST00000410628 GPR153Q6NV75 609 aa5.88□□□□□ -1.47
RNU4-43P-201ENST00000410628 STK24Q9Y6E0 443 aa5.88□□□□□ -1.47
RNU4-43P-201ENST00000410628 RIMBP2O15034 1052 aa5.86□□□□□ -1.47
RNU4-43P-201ENST00000410628 FBXO22Q8NEZ5 403 aa5.86□□□□□ -1.47
RNU4-43P-201ENST00000410628 MFRPQ9BY79 579 aa5.85□□□□□ -1.47
RNU4-43P-201ENST00000410628 STK25O00506 426 aa5.83□□□□□ -1.48
RNU4-43P-201ENST00000410628 NLRP6P59044 892 aa5.83□□□□□ -1.48
RNU4-43P-201ENST00000410628 ANKRD13DQ6ZTN6 518 aa5.83□□□□□ -1.48
RNU4-43P-201ENST00000410628 C2orf72A6NCS6 295 aa5.82□□□□□ -1.48
RNU4-43P-201ENST00000410628 RGL2O15211 777 aa5.82□□□□□ -1.48
RNU4-43P-201ENST00000410628 ECM2O94769 699 aaPredicted RBP5.82□□□□□ -1.48
RNU4-43P-201ENST00000410628 ZNF687Q8N1G0 1237 aa5.82□□□□□ -1.48
RNU4-43P-201ENST00000410628 NUDT7P0C024 238 aa5.81□□□□□ -1.48
RNU4-43P-201ENST00000410628 ZNF316A6NFI3 1004 aaPredicted RBP5.8□□□□□ -1.48
RNU4-43P-201ENST00000410628 ZSWIM6Q9HCJ5 1215 aa5.8□□□□□ -1.48
RNU4-43P-201ENST00000410628 AXIN2Q9Y2T1 843 aa5.8□□□□□ -1.48
RNU4-43P-201ENST00000410628 PPP1R37O75864 691 aa5.79□□□□□ -1.48
RNU4-43P-201ENST00000410628 KIF3CO14782 793 aa5.78□□□□□ -1.48
RNU4-43P-201ENST00000410628 PKD2Q13563 968 aa5.78□□□□□ -1.48
RNU4-43P-201ENST00000410628 POTEEQ6S8J3 1075 aa5.78□□□□□ -1.48
RNU4-43P-201ENST00000410628 HCSTQ9UBK5 93 aa5.77□□□□□ -1.49
RNU4-43P-201ENST00000410628 LHX6Q9UPM6 363 aa5.77□□□□□ -1.49
RNU4-43P-201ENST00000410628 LSM11P83369 360 aaKnown RBP eCLIP5.75□□□□□ -1.49
RNU4-43P-201ENST00000410628 Q6ZNB5 142 aa5.75□□□□□ -1.49
RNU4-43P-201ENST00000410628 PCDHGA4Q9Y5G9 962 aa5.75□□□□□ -1.49
RNU4-43P-201ENST00000410628 TMC2Q8TDI7 906 aa5.73□□□□□ -1.49
RNU4-43P-201ENST00000410628 RGS20O76081 388 aa5.72□□□□□ -1.49
RNU4-43P-201ENST00000410628 TAOK2Q9UL54 1235 aa5.72□□□□□ -1.49
RNU4-43P-201ENST00000410628 PSEN2P49810 448 aa5.69□□□□□ -1.5
RNU4-43P-201ENST00000410628 DMRTA1Q5VZB9 504 aa5.69□□□□□ -1.5
RNU4-43P-201ENST00000410628 SLC34A2O95436 690 aa5.67□□□□□ -1.5
RNU4-43P-201ENST00000410628 DSG2Q14126 1118 aa5.66□□□□□ -1.5
RNU4-43P-201ENST00000410628 ADGRD1Q6QNK2 874 aa5.66□□□□□ -1.5
RNU4-43P-201ENST00000410628 PLPP6Q8IY26 295 aa5.66□□□□□ -1.5
RNU4-43P-201ENST00000410628 KDM4FA0A1W2PPD8 638 aa5.65□□□□□ -1.5
RNU4-43P-201ENST00000410628 PBX2P40425 430 aa5.65□□□□□ -1.5
RNU4-43P-201ENST00000410628 ARHGAP33O14559 1287 aa5.64□□□□□ -1.51
RNU4-43P-201ENST00000410628 UPF1Q92900 1129 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU4-43P-201ENST00000410628 CHGAP10645 457 aaKnown RBP5.63□□□□□ -1.51
RNU4-43P-201ENST00000410628 PTCD2Q8WV60 388 aaKnown RBP5.63□□□□□ -1.51
RNU4-43P-201ENST00000410628 FOXK1P85037 733 aa5.62□□□□□ -1.51
RNU4-43P-201ENST00000410628 NKX1-1Q15270 411 aaPredicted RBP5.62□□□□□ -1.51
RNU4-43P-201ENST00000410628 KCNK17Q96T54 332 aa5.62□□□□□ -1.51
RNU4-43P-201ENST00000410628 GPHNQ9NQX3 736 aaPredicted RBP5.62□□□□□ -1.51
RNU4-43P-201ENST00000410628 HS6ST3Q8IZP7 471 aa5.61□□□□□ -1.51
RNU4-43P-201ENST00000410628 KCTD12Q96CX2 325 aaKnown RBP5.61□□□□□ -1.51
RNU4-43P-201ENST00000410628 HRO43593 1189 aa5.6□□□□□ -1.51
RNU4-43P-201ENST00000410628 PPP4R3BQ5MIZ7 849 aa5.58□□□□□ -1.52
RNU4-43P-201ENST00000410628 PTPN5P54829 565 aa5.57□□□□□ -1.52
RNU4-43P-201ENST00000410628 ZNF454Q8N9F8 522 aa5.57□□□□□ -1.52
RNU4-43P-201ENST00000410628 PSDA5PKW4 1024 aaPredicted RBP5.56□□□□□ -1.52
RNU4-43P-201ENST00000410628 OXER1Q8TDS5 423 aa5.56□□□□□ -1.52
RNU4-43P-201ENST00000410628 NCKAP5LQ9HCH0 1330 aa5.55□□□□□ -1.52
RNU4-43P-201ENST00000410628 TK2O00142 265 aa5.55□□□□□ -1.52
RNU4-43P-201ENST00000410628 TBC1D12O60347 775 aa5.55□□□□□ -1.52
RNU4-43P-201ENST00000410628 STAC3Q96MF2 364 aa5.55□□□□□ -1.52
RNU4-43P-201ENST00000410628 VPS9D1Q9Y2B5 631 aa5.55□□□□□ -1.52
RNU4-43P-201ENST00000410628 PPP1R15BQ5SWA1 713 aa5.54□□□□□ -1.52
RNU4-43P-201ENST00000410628 CRISPLD2Q9H0B8 497 aa5.54□□□□□ -1.52
RNU4-43P-201ENST00000410628 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
RNU4-43P-201ENST00000410628 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
RNU4-43P-201ENST00000410628 ADAM33Q9BZ11 813 aa5.51□□□□□ -1.53
RNU4-43P-201ENST00000410628 EVI5O60447 810 aa5.5□□□□□ -1.53
RNU4-43P-201ENST00000410628 FOSBP53539 338 aa5.5□□□□□ -1.53
RNU4-43P-201ENST00000410628 TRAF7Q6Q0C0 670 aa5.5□□□□□ -1.53
RNU4-43P-201ENST00000410628 LARP6Q9BRS8 491 aaKnown RBP5.5□□□□□ -1.53
RNU4-43P-201ENST00000410628 BCL2L12Q9HB09 334 aa5.5□□□□□ -1.53
RNU4-43P-201ENST00000410628 A0A0G2JS52 829 aa5.49□□□□□ -1.53
RNU4-43P-201ENST00000410628 KCNH8Q96L42 1107 aa5.49□□□□□ -1.53
RNU4-43P-201ENST00000410628 ZBED2Q9BTP6 218 aa5.49□□□□□ -1.53
RNU4-43P-201ENST00000410628 BHMG1C9JSJ3 638 aaPredicted RBP5.48□□□□□ -1.53
RNU4-43P-201ENST00000410628 GTPBP6O43824 516 aaPredicted RBP5.48□□□□□ -1.53
RNU4-43P-201ENST00000410628 PTPREP23469 700 aa5.48□□□□□ -1.53
RNU4-43P-201ENST00000410628 THSD4Q6ZMP0 1018 aa5.48□□□□□ -1.53
RNU4-43P-201ENST00000410628 CADPS2Q86UW7 1296 aa5.48□□□□□ -1.53
RNU4-43P-201ENST00000410628 DCAF8L2P0C7V8 631 aa5.47□□□□□ -1.53
RNU4-43P-201ENST00000410628 PDE4AP27815 886 aa5.47□□□□□ -1.53
RNU4-43P-201ENST00000410628 LAPTM4AQ15012 233 aa5.47□□□□□ -1.53
RNU4-43P-201ENST00000410628 PROX2Q3B8N5 592 aa5.47□□□□□ -1.53
RNU4-43P-201ENST00000410628 WNT2BQ93097 391 aa5.47□□□□□ -1.53
RNU4-43P-201ENST00000410628 EMILIN3Q9NT22 766 aa5.47□□□□□ -1.53
RNU4-43P-201ENST00000410628 GOLGA8CPA6NN73 597 aa5.46□□□□□ -1.54
RNU4-43P-201ENST00000410628 COL9A1P20849 921 aa5.46□□□□□ -1.54
RNU4-43P-201ENST00000410628 ZNF787Q6DD87 383 aa5.46□□□□□ -1.54
RNU4-43P-201ENST00000410628 MRPL50Q8N5N7 158 aaKnown RBP5.46□□□□□ -1.54
RNU4-43P-201ENST00000410628 ZDHHC16Q969W1 377 aa5.46□□□□□ -1.54
RNU4-43P-201ENST00000410628 DDX27Q96GQ7 796 aaKnown RBP5.46□□□□□ -1.54
RNU4-43P-201ENST00000410628 JPH4Q96JJ6 628 aa5.46□□□□□ -1.54
RNU4-43P-201ENST00000410628 DNAJC5Q9H3Z4 198 aa5.46□□□□□ -1.54
RNU4-43P-201ENST00000410628 MAP3K9P80192 1104 aa5.45□□□□□ -1.54
RNU4-43P-201ENST00000410628 IFFO2Q5TF58 517 aa5.45□□□□□ -1.54
RNU4-43P-201ENST00000410628 ANO8Q9HCE9 1232 aaPredicted RBP5.45□□□□□ -1.54
RNU4-43P-201ENST00000410628 ZNF775Q96BV0 537 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms