RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 CCNB3Q8WWL7 1395 aa11.56□□□□□ -0.56
POLR1B-203ENST00000409894 APBB1O00213 710 aa11.56□□□□□ -0.56
POLR1B-203ENST00000409894 A0A0G2JS52 829 aa11.55□□□□□ -0.56
POLR1B-203ENST00000409894 RSF1Q96T23 1441 aaPredicted RBP11.55□□□□□ -0.56
POLR1B-203ENST00000409894 PTMSP20962 102 aa11.55□□□□□ -0.56
POLR1B-203ENST00000409894 OS9Q13438 667 aaPredicted RBP11.55□□□□□ -0.56
POLR1B-203ENST00000409894 C14orf37Q86TY3 774 aa11.55□□□□□ -0.56
POLR1B-203ENST00000409894 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
POLR1B-203ENST00000409894 PDE4AP27815 886 aa11.54□□□□□ -0.56
POLR1B-203ENST00000409894 MCCP23508 829 aa11.54□□□□□ -0.56
POLR1B-203ENST00000409894 FOXD4L1Q9NU39 408 aa11.54□□□□□ -0.56
POLR1B-203ENST00000409894 DCAF11Q8TEB1 546 aa11.52□□□□□ -0.56
POLR1B-203ENST00000409894 CFDP1Q9UEE9 299 aaPredicted RBP11.52□□□□□ -0.56
POLR1B-203ENST00000409894 RWDD1Q9H446 243 aaPredicted RBP11.52□□□□□ -0.57
POLR1B-203ENST00000409894 CECR2Q9BXF3 1484 aa11.52□□□□□ -0.57
POLR1B-203ENST00000409894 SYAP1Q96A49 352 aaPredicted RBP11.51□□□□□ -0.57
POLR1B-203ENST00000409894 TMF1P82094 1093 aa11.51□□□□□ -0.57
POLR1B-203ENST00000409894 FAM13BQ9NYF5 915 aa11.5□□□□□ -0.57
POLR1B-203ENST00000409894 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
POLR1B-203ENST00000409894 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
POLR1B-203ENST00000409894 BAZ1BQ9UIG0 1483 aaKnown RBP11.48□□□□□ -0.57
POLR1B-203ENST00000409894 PPP1R15AO75807 674 aaPredicted RBP11.48□□□□□ -0.57
POLR1B-203ENST00000409894 ITPRIPQ8IWB1 547 aa11.47□□□□□ -0.57
POLR1B-203ENST00000409894 PLEKHD1A6NEE1 506 aa11.47□□□□□ -0.57
POLR1B-203ENST00000409894 DDX49Q9Y6V7 483 aaKnown RBP11.47□□□□□ -0.57
POLR1B-203ENST00000409894 KTN1Q86UP2 1357 aaKnown RBP11.46□□□□□ -0.57
POLR1B-203ENST00000409894 FOXD1Q16676 465 aa11.46□□□□□ -0.58
POLR1B-203ENST00000409894 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
POLR1B-203ENST00000409894 PRKCSHP14314 528 aaPredicted RBP11.45□□□□□ -0.58
POLR1B-203ENST00000409894 DDX11L8A8MPP1 907 aa11.45□□□□□ -0.58
POLR1B-203ENST00000409894 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
POLR1B-203ENST00000409894 KIAA1211Q6ZU35 1233 aa11.45□□□□□ -0.58
POLR1B-203ENST00000409894 PMFBP1Q8TBY8 1022 aa11.45□□□□□ -0.58
POLR1B-203ENST00000409894 A0A0U1RQG5 324 aaPredicted RBP11.45□□□□□ -0.58
POLR1B-203ENST00000409894 FOXD4L5Q5VV16 416 aaPredicted RBP11.45□□□□□ -0.58
POLR1B-203ENST00000409894 IL27Q8NEV9 243 aa11.45□□□□□ -0.58
POLR1B-203ENST00000409894 FOXD4L4Q8WXT5 416 aaPredicted RBP11.45□□□□□ -0.58
POLR1B-203ENST00000409894 FAM161AQ3B820 660 aa11.45□□□□□ -0.58
POLR1B-203ENST00000409894 MORC1Q86VD1 984 aa11.45□□□□□ -0.58
POLR1B-203ENST00000409894 SETD5Q9C0A6 1442 aa11.44□□□□□ -0.58
POLR1B-203ENST00000409894 NOL8Q76FK4 1167 aaKnown RBP11.44□□□□□ -0.58
POLR1B-203ENST00000409894 EXOC6Q8TAG9 804 aa11.44□□□□□ -0.58
POLR1B-203ENST00000409894 PKNOX2Q96KN3 472 aa11.43□□□□□ -0.58
POLR1B-203ENST00000409894 PLIN1O60240 522 aa11.43□□□□□ -0.58
POLR1B-203ENST00000409894 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
POLR1B-203ENST00000409894 ZNF771Q7L3S4 317 aaPredicted RBP11.43□□□□□ -0.58
POLR1B-203ENST00000409894 RALBP1Q15311 655 aa11.43□□□□□ -0.58
POLR1B-203ENST00000409894 KANK4Q5T7N3 995 aaPredicted RBP11.43□□□□□ -0.58
POLR1B-203ENST00000409894 WRNQ14191 1432 aaPredicted RBP eCLIP11.42□□□□□ -0.58
POLR1B-203ENST00000409894 POGKQ9P215 609 aa11.42□□□□□ -0.58
POLR1B-203ENST00000409894 RAB3GAP2Q9H2M9 1393 aa11.41□□□□□ -0.58
POLR1B-203ENST00000409894 PDE3BQ13370 1112 aa11.41□□□□□ -0.58
POLR1B-203ENST00000409894 FAM43AQ8N2R8 423 aa11.41□□□□□ -0.58
POLR1B-203ENST00000409894 GOLGA6L1Q8N7Z2 621 aa11.41□□□□□ -0.58
POLR1B-203ENST00000409894 BRPF3Q9ULD4 1205 aa11.41□□□□□ -0.58
POLR1B-203ENST00000409894 U2AF1L5P0DN76 240 aaPredicted RBP11.41□□□□□ -0.58
POLR1B-203ENST00000409894 U2AF1Q01081 240 aaKnown RBP eCLIP11.41□□□□□ -0.58
POLR1B-203ENST00000409894 NFKBIBQ15653 356 aa11.4□□□□□ -0.58
POLR1B-203ENST00000409894 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.59
POLR1B-203ENST00000409894 FOXD4L6Q3SYB3 417 aaPredicted RBP11.39□□□□□ -0.59
POLR1B-203ENST00000409894 FOXD4L3Q6VB84 417 aaPredicted RBP11.39□□□□□ -0.59
POLR1B-203ENST00000409894 NLRP13Q86W25 1043 aa11.39□□□□□ -0.59
POLR1B-203ENST00000409894 SMC4Q9NTJ3 1288 aa11.39□□□□□ -0.59
POLR1B-203ENST00000409894 HTATSF1O43719 755 aaKnown RBP11.39□□□□□ -0.59
POLR1B-203ENST00000409894 CENPQQ7L2Z9 268 aaPredicted RBP11.39□□□□□ -0.59
POLR1B-203ENST00000409894 NOC3LQ8WTT2 800 aaKnown RBP11.39□□□□□ -0.59
POLR1B-203ENST00000409894 SOX12O15370 315 aa11.38□□□□□ -0.59
POLR1B-203ENST00000409894 PHF14O94880 888 aa11.38□□□□□ -0.59
POLR1B-203ENST00000409894 HAP1P54257 671 aaPredicted RBP11.37□□□□□ -0.59
POLR1B-203ENST00000409894 CCDC146Q8IYE0 955 aa11.37□□□□□ -0.59
POLR1B-203ENST00000409894 SKOR2Q2VWA4 1001 aaPredicted RBP11.37□□□□□ -0.59
POLR1B-203ENST00000409894 DNAJC5BQ9UF47 199 aa11.37□□□□□ -0.59
POLR1B-203ENST00000409894 CENPJQ9HC77 1338 aaPredicted RBP11.37□□□□□ -0.59
POLR1B-203ENST00000409894 ST18O60284 1047 aa11.37□□□□□ -0.59
POLR1B-203ENST00000409894 RRP1P56182 461 aaKnown RBP11.37□□□□□ -0.59
POLR1B-203ENST00000409894 CRBNQ96SW2 442 aa11.36□□□□□ -0.59
POLR1B-203ENST00000409894 TRIM6-TRIM34B2RNG4 842 aa11.36□□□□□ -0.59
POLR1B-203ENST00000409894 PKD2Q13563 968 aa11.36□□□□□ -0.59
POLR1B-203ENST00000409894 SAFB2Q14151 953 aaKnown RBP eCLIP11.36□□□□□ -0.59
POLR1B-203ENST00000409894 L3MBTL2Q969R5 705 aa11.36□□□□□ -0.59
POLR1B-203ENST00000409894 TPM4P67936 248 aa11.35□□□□□ -0.59
POLR1B-203ENST00000409894 PRKRIP1Q9H875 184 aaPredicted RBP11.35□□□□□ -0.59
POLR1B-203ENST00000409894 ZBED9Q6R2W3 1325 aa11.35□□□□□ -0.59
POLR1B-203ENST00000409894 VPS8Q8N3P4 1428 aa11.35□□□□□ -0.59
POLR1B-203ENST00000409894 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.35□□□□□ -0.59
POLR1B-203ENST00000409894 SRPK2P78362 688 aaKnown RBP11.34□□□□□ -0.59
POLR1B-203ENST00000409894 CCAR2Q8N163 923 aaKnown RBP11.34□□□□□ -0.59
POLR1B-203ENST00000409894 ZNF592Q92610 1267 aa11.34□□□□□ -0.59
POLR1B-203ENST00000409894 SOGA1O94964 1423 aa11.34□□□□□ -0.59
POLR1B-203ENST00000409894 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
POLR1B-203ENST00000409894 BCL2L13Q9BXK5 485 aa11.34□□□□□ -0.59
POLR1B-203ENST00000409894 LMOD2Q6P5Q4 547 aa11.34□□□□□ -0.59
POLR1B-203ENST00000409894 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
POLR1B-203ENST00000409894 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.6
POLR1B-203ENST00000409894 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
POLR1B-203ENST00000409894 CHMP5Q9NZZ3 219 aa11.33□□□□□ -0.6
POLR1B-203ENST00000409894 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
POLR1B-203ENST00000409894 MPHOSPH9Q99550 1183 aa11.33□□□□□ -0.6
POLR1B-203ENST00000409894 R3HCC1Q9Y3T6 440 aaKnown RBP11.33□□□□□ -0.6
POLR1B-203ENST00000409894 CYB5RLQ6IPT4 315 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms