RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 CDK11AQ9UQ88 783 aaPredicted RBP21.15■□□□□ 0.98
LIMS2-206ENST00000409754 CDC42BPBQ9Y5S2 1711 aa21.14■□□□□ 0.97
LIMS2-206ENST00000409754 COL17A1Q9UMD9 1497 aaPredicted RBP21.13■□□□□ 0.97
LIMS2-206ENST00000409754 PREX2Q70Z35 1606 aa21.12■□□□□ 0.97
LIMS2-206ENST00000409754 FGD6Q6ZV73 1430 aa21.1■□□□□ 0.97
LIMS2-206ENST00000409754 TEX14Q8IWB6 1497 aa21.1■□□□□ 0.97
LIMS2-206ENST00000409754 MYOM3Q5VTT5 1437 aa21.09■□□□□ 0.97
LIMS2-206ENST00000409754 ARAP3Q8WWN8 1544 aa21.08■□□□□ 0.97
LIMS2-206ENST00000409754 PLCH2O75038 1416 aa21.08■□□□□ 0.97
LIMS2-206ENST00000409754 KDM6BO15054 1643 aa21.06■□□□□ 0.96
LIMS2-206ENST00000409754 GPATCH8Q9UKJ3 1502 aaKnown RBP21.06■□□□□ 0.96
LIMS2-206ENST00000409754 FANCAO15360 1455 aa21.05■□□□□ 0.96
LIMS2-206ENST00000409754 FAM50AQ14320 339 aaKnown RBP21.05■□□□□ 0.96
LIMS2-206ENST00000409754 NEO1Q92859 1461 aa21.05■□□□□ 0.96
LIMS2-206ENST00000409754 FRMPD1Q5SYB0 1578 aa21.04■□□□□ 0.96
LIMS2-206ENST00000409754 CFAP74Q9C0B2 1584 aa21.02■□□□□ 0.96
LIMS2-206ENST00000409754 ITGAEP38570 1179 aa21.01■□□□□ 0.95
LIMS2-206ENST00000409754 ARHGAP5Q13017 1502 aa21.01■□□□□ 0.95
LIMS2-206ENST00000409754 SAMD9LQ8IVG5 1584 aa21■□□□□ 0.95
LIMS2-206ENST00000409754 ITSN2Q9NZM3 1697 aa20.99■□□□□ 0.95
LIMS2-206ENST00000409754 AKNAQ7Z591 1439 aa20.98■□□□□ 0.95
LIMS2-206ENST00000409754 RICTORQ6R327 1708 aa20.98■□□□□ 0.95
LIMS2-206ENST00000409754 TCOF1Q13428 1488 aaKnown RBP20.97■□□□□ 0.95
LIMS2-206ENST00000409754 MIA2Q96PC5 1412 aa20.97■□□□□ 0.95
LIMS2-206ENST00000409754 PTPN23Q9H3S7 1636 aa20.97■□□□□ 0.95
LIMS2-206ENST00000409754 ABCC1P33527 1531 aa20.97■□□□□ 0.95
LIMS2-206ENST00000409754 ARHGEF12Q9NZN5 1544 aa20.97■□□□□ 0.95
LIMS2-206ENST00000409754 ADGRL1O94910 1474 aa20.94■□□□□ 0.94
LIMS2-206ENST00000409754 SETD5Q9C0A6 1442 aa20.93■□□□□ 0.94
LIMS2-206ENST00000409754 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
LIMS2-206ENST00000409754 CLSPNQ9HAW4 1339 aa20.91■□□□□ 0.94
LIMS2-206ENST00000409754 RAB3GAP2Q9H2M9 1393 aa20.9■□□□□ 0.94
LIMS2-206ENST00000409754 SYCP2Q9BX26 1530 aa20.9■□□□□ 0.94
LIMS2-206ENST00000409754 EFCAB2Q5VUJ9 269 aa20.89■□□□□ 0.94
LIMS2-206ENST00000409754 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.94
LIMS2-206ENST00000409754 SCAPERQ9BY12 1400 aa20.89■□□□□ 0.94
LIMS2-206ENST00000409754 ZNF644Q9H582 1327 aaPredicted RBP20.88■□□□□ 0.93
LIMS2-206ENST00000409754 DENND4BO75064 1496 aaPredicted RBP20.88■□□□□ 0.93
LIMS2-206ENST00000409754 RAPGEF3O95398 923 aa20.88■□□□□ 0.93
LIMS2-206ENST00000409754 ZMYM4Q5VZL5 1548 aa20.87■□□□□ 0.93
LIMS2-206ENST00000409754 KDM5CP41229 1560 aa20.87■□□□□ 0.93
LIMS2-206ENST00000409754 TRAPPC8Q9Y2L5 1435 aa20.86■□□□□ 0.93
LIMS2-206ENST00000409754 PTPRKQ15262 1439 aa20.86■□□□□ 0.93
LIMS2-206ENST00000409754 CAMSAP2Q08AD1 1489 aa20.86■□□□□ 0.93
LIMS2-206ENST00000409754 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
LIMS2-206ENST00000409754 MBD5Q9P267 1494 aa20.84■□□□□ 0.93
LIMS2-206ENST00000409754 HFM1A2PYH4 1435 aa20.82■□□□□ 0.92
LIMS2-206ENST00000409754 KIAA1107Q9UPP5 1409 aa20.82■□□□□ 0.92
LIMS2-206ENST00000409754 ZNF777Q9ULD5 760 aaPredicted RBP20.81■□□□□ 0.92
LIMS2-206ENST00000409754 SIGLEC1Q9BZZ2 1709 aa20.8■□□□□ 0.92
LIMS2-206ENST00000409754 ZNF518AQ6AHZ1 1483 aa20.8■□□□□ 0.92
LIMS2-206ENST00000409754 ARHGEF40Q8TER5 1519 aa20.79■□□□□ 0.92
LIMS2-206ENST00000409754 PLEKHH2Q8IVE3 1493 aa20.78■□□□□ 0.92
LIMS2-206ENST00000409754 YEATS2Q9ULM3 1422 aa20.78■□□□□ 0.92
LIMS2-206ENST00000409754 AFAP1Q8N556 730 aa20.78■□□□□ 0.92
LIMS2-206ENST00000409754 KIDINS220Q9ULH0 1771 aa20.77■□□□□ 0.92
LIMS2-206ENST00000409754 HECW2Q9P2P5 1572 aa20.77■□□□□ 0.92
LIMS2-206ENST00000409754 INO80Q9ULG1 1556 aaPredicted RBP20.77■□□□□ 0.92
LIMS2-206ENST00000409754 ARHGEF5Q12774 1597 aa20.76■□□□□ 0.91
LIMS2-206ENST00000409754 HNRNPMP52272 730 aaKnown RBP eCLIP20.76■□□□□ 0.91
LIMS2-206ENST00000409754 ABCA6Q8N139 1617 aa20.76■□□□□ 0.91
LIMS2-206ENST00000409754 NAIPQ13075 1403 aa20.75■□□□□ 0.91
LIMS2-206ENST00000409754 ZFYVE16Q7Z3T8 1539 aa20.74■□□□□ 0.91
LIMS2-206ENST00000409754 DNMT1P26358 1616 aaKnown RBP20.74■□□□□ 0.91
LIMS2-206ENST00000409754 DIP2CQ9Y2E4 1556 aa20.73■□□□□ 0.91
LIMS2-206ENST00000409754 DAPK1P53355 1430 aa20.73■□□□□ 0.91
LIMS2-206ENST00000409754 MLH3Q9UHC1 1453 aa20.73■□□□□ 0.91
LIMS2-206ENST00000409754 CROCC2H7BZ55 1655 aa20.72■□□□□ 0.91
LIMS2-206ENST00000409754 CCDC141Q6ZP82 1450 aa20.71■□□□□ 0.91
LIMS2-206ENST00000409754 ABCC5O15440 1437 aa20.71■□□□□ 0.91
LIMS2-206ENST00000409754 MAGI2Q86UL8 1455 aa20.71■□□□□ 0.91
LIMS2-206ENST00000409754 GCC2Q8IWJ2 1684 aa20.7■□□□□ 0.9
LIMS2-206ENST00000409754 ROCK1Q13464 1354 aa20.7■□□□□ 0.9
LIMS2-206ENST00000409754 ATP7AQ04656 1500 aa20.7■□□□□ 0.9
LIMS2-206ENST00000409754 CHIC2Q9UKJ5 165 aa20.67■□□□□ 0.9
LIMS2-206ENST00000409754 MAST1Q9Y2H9 1570 aa20.66■□□□□ 0.9
LIMS2-206ENST00000409754 ADGBQ8N7X0 1667 aa20.66■□□□□ 0.9
LIMS2-206ENST00000409754 RRP7BPQ9NSQ0 103 aa20.64■□□□□ 0.9
LIMS2-206ENST00000409754 REREQ9P2R6 1566 aa20.63■□□□□ 0.89
LIMS2-206ENST00000409754 PLXNC1O60486 1568 aa20.62■□□□□ 0.89
LIMS2-206ENST00000409754 SPAG9O60271 1321 aaKnown RBP20.61■□□□□ 0.89
LIMS2-206ENST00000409754 SHANK2Q9UPX8 1470 aa20.61■□□□□ 0.89
LIMS2-206ENST00000409754 ATP10AO60312 1499 aa20.6■□□□□ 0.89
LIMS2-206ENST00000409754 ACIN1Q9UKV3 1341 aaKnown RBP20.6■□□□□ 0.89
LIMS2-206ENST00000409754 RTEL1-TNFRSF6BF6WH68 1400 aa20.6■□□□□ 0.89
LIMS2-206ENST00000409754 ADGRL2O95490 1459 aa20.59■□□□□ 0.89
LIMS2-206ENST00000409754 C9orf84Q5VXU9 1444 aa20.59■□□□□ 0.89
LIMS2-206ENST00000409754 BCORL1Q5H9F3 1711 aa20.56■□□□□ 0.88
LIMS2-206ENST00000409754 NCOA1Q15788 1441 aa20.55■□□□□ 0.88
LIMS2-206ENST00000409754 RSPH4AQ5TD94 716 aa20.54■□□□□ 0.88
LIMS2-206ENST00000409754 ADAMTSL3P82987 1691 aa20.53■□□□□ 0.88
LIMS2-206ENST00000409754 AGLP35573 1532 aa20.53■□□□□ 0.88
LIMS2-206ENST00000409754 A2MP01023 1474 aa20.53■□□□□ 0.88
LIMS2-206ENST00000409754 ANKRD30AQ9BXX3 1397 aa20.52■□□□□ 0.88
LIMS2-206ENST00000409754 KDM4FA0A1W2PPD8 638 aa20.49■□□□□ 0.87
LIMS2-206ENST00000409754 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
LIMS2-206ENST00000409754 TIMELESSQ9UNS1 1208 aa20.49■□□□□ 0.87
LIMS2-206ENST00000409754 MADDQ8WXG6 1647 aa20.48■□□□□ 0.87
LIMS2-206ENST00000409754 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
LIMS2-206ENST00000409754 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms