RNA–Protein interactions for RNA: ENST00000409545.2

C2orf88-203, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 3

Gene C2orf88, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-203ENST00000409545 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.26
C2orf88-203ENST00000409545 C2orf72A6NCS6 295 aa13.39□□□□□ -0.27
C2orf88-203ENST00000409545 SNPHO15079 494 aa13.37□□□□□ -0.27
C2orf88-203ENST00000409545 TMC2Q8TDI7 906 aa13.37□□□□□ -0.27
C2orf88-203ENST00000409545 KIF3CO14782 793 aa13.36□□□□□ -0.27
C2orf88-203ENST00000409545 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
C2orf88-203ENST00000409545 ST18O60284 1047 aa13.29□□□□□ -0.28
C2orf88-203ENST00000409545 HOXB3P14651 431 aaPredicted RBP13.29□□□□□ -0.28
C2orf88-203ENST00000409545 LCE2DQ5TA82 110 aaPredicted RBP13.29□□□□□ -0.28
C2orf88-203ENST00000409545 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
C2orf88-203ENST00000409545 PDE4AP27815 886 aa13.26□□□□□ -0.29
C2orf88-203ENST00000409545 DOK7Q18PE1 504 aa13.26□□□□□ -0.29
C2orf88-203ENST00000409545 CRISPLD2Q9H0B8 497 aa13.26□□□□□ -0.29
C2orf88-203ENST00000409545 NCKAP5LQ9HCH0 1330 aa13.26□□□□□ -0.29
C2orf88-203ENST00000409545 FOXK1P85037 733 aa13.24□□□□□ -0.29
C2orf88-203ENST00000409545 DSG2Q14126 1118 aa13.24□□□□□ -0.29
C2orf88-203ENST00000409545 ZNF710Q8N1W2 664 aa13.24□□□□□ -0.29
C2orf88-203ENST00000409545 PLPP6Q8IY26 295 aa13.22□□□□□ -0.29
C2orf88-203ENST00000409545 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
C2orf88-203ENST00000409545 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
C2orf88-203ENST00000409545 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
C2orf88-203ENST00000409545 PLCB2Q00722 1185 aa13.16□□□□□ -0.3
C2orf88-203ENST00000409545 MARVELD3Q96A59 401 aa13.16□□□□□ -0.3
C2orf88-203ENST00000409545 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
C2orf88-203ENST00000409545 POTEMA6NI47 508 aa13.15□□□□□ -0.3
C2orf88-203ENST00000409545 POTEGQ6S5H5 508 aa13.15□□□□□ -0.3
C2orf88-203ENST00000409545 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
C2orf88-203ENST00000409545 HOXB1P14653 301 aaPredicted RBP13.13□□□□□ -0.31
C2orf88-203ENST00000409545 MFSD10Q14728 455 aa13.13□□□□□ -0.31
C2orf88-203ENST00000409545 ARSIQ5FYB1 569 aa13.13□□□□□ -0.31
C2orf88-203ENST00000409545 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
C2orf88-203ENST00000409545 ZSWIM6Q9HCJ5 1215 aa13.13□□□□□ -0.31
C2orf88-203ENST00000409545 SLC34A2O95436 690 aa13.12□□□□□ -0.31
C2orf88-203ENST00000409545 KHSRPQ92945 711 aaKnown RBP eCLIP13.11□□□□□ -0.31
C2orf88-203ENST00000409545 EMP3P54852 163 aa13.09□□□□□ -0.31
C2orf88-203ENST00000409545 PCDHGA4Q9Y5G9 962 aa13.09□□□□□ -0.31
C2orf88-203ENST00000409545 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
C2orf88-203ENST00000409545 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
C2orf88-203ENST00000409545 NUDT7P0C024 238 aa13.04□□□□□ -0.32
C2orf88-203ENST00000409545 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
C2orf88-203ENST00000409545 TBC1D12O60347 775 aa13.02□□□□□ -0.33
C2orf88-203ENST00000409545 OXER1Q8TDS5 423 aa13.02□□□□□ -0.33
C2orf88-203ENST00000409545 WDR70Q9NW82 654 aa13.02□□□□□ -0.33
C2orf88-203ENST00000409545 HAP1P54257 671 aaPredicted RBP13.01□□□□□ -0.33
C2orf88-203ENST00000409545 ERBB3P21860 1342 aa13□□□□□ -0.33
C2orf88-203ENST00000409545 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
C2orf88-203ENST00000409545 POTEB3A0JP26 581 aa12.98□□□□□ -0.33
C2orf88-203ENST00000409545 POTEBQ6S5H4 581 aa12.98□□□□□ -0.33
C2orf88-203ENST00000409545 HS3ST6Q96QI5 342 aa12.98□□□□□ -0.33
C2orf88-203ENST00000409545 CAMK2BQ13554 666 aa12.96□□□□□ -0.33
C2orf88-203ENST00000409545 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
C2orf88-203ENST00000409545 MAP3K9P80192 1104 aa12.95□□□□□ -0.34
C2orf88-203ENST00000409545 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
C2orf88-203ENST00000409545 LHX6Q9UPM6 363 aa12.95□□□□□ -0.34
C2orf88-203ENST00000409545 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
C2orf88-203ENST00000409545 E2F4Q16254 413 aa12.93□□□□□ -0.34
C2orf88-203ENST00000409545 CDAN1Q8IWY9 1227 aa12.93□□□□□ -0.34
C2orf88-203ENST00000409545 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
C2orf88-203ENST00000409545 EVI5O60447 810 aa12.89□□□□□ -0.35
C2orf88-203ENST00000409545 DPYSL4O14531 572 aa12.88□□□□□ -0.35
C2orf88-203ENST00000409545 PCDH10Q9P2E7 1040 aa12.86□□□□□ -0.35
C2orf88-203ENST00000409545 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
C2orf88-203ENST00000409545 ZNF687Q8N1G0 1237 aa12.83□□□□□ -0.36
C2orf88-203ENST00000409545 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
C2orf88-203ENST00000409545 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
C2orf88-203ENST00000409545 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
C2orf88-203ENST00000409545 ZNF454Q8N9F8 522 aa12.77□□□□□ -0.37
C2orf88-203ENST00000409545 KRTAP3-3Q9BYR6 98 aa12.77□□□□□ -0.37
C2orf88-203ENST00000409545 KRTAP3-2Q9BYR7 98 aa12.77□□□□□ -0.37
C2orf88-203ENST00000409545 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
C2orf88-203ENST00000409545 PPP4R3BQ5MIZ7 849 aa12.76□□□□□ -0.37
C2orf88-203ENST00000409545 VSIG10Q8N0Z9 540 aa12.75□□□□□ -0.37
C2orf88-203ENST00000409545 SPDYE16A6NNV3 312 aaPredicted RBP12.74□□□□□ -0.37
C2orf88-203ENST00000409545 FOSBP53539 338 aa12.74□□□□□ -0.37
C2orf88-203ENST00000409545 PDIA6Q15084 440 aa12.74□□□□□ -0.37
C2orf88-203ENST00000409545 POTEEQ6S8J3 1075 aa12.73□□□□□ -0.37
C2orf88-203ENST00000409545 AXIN2Q9Y2T1 843 aa12.73□□□□□ -0.37
C2orf88-203ENST00000409545 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
C2orf88-203ENST00000409545 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
C2orf88-203ENST00000409545 P3H3Q8IVL6 736 aa12.7□□□□□ -0.38
C2orf88-203ENST00000409545 DDX12PQ92771 950 aa12.7□□□□□ -0.38
C2orf88-203ENST00000409545 PCDHGA10Q9Y5H3 936 aa12.7□□□□□ -0.38
C2orf88-203ENST00000409545 PTGER2P43116 358 aa12.69□□□□□ -0.38
C2orf88-203ENST00000409545 PBX2P40425 430 aa12.68□□□□□ -0.38
C2orf88-203ENST00000409545 ZDHHC16Q969W1 377 aa12.68□□□□□ -0.38
C2orf88-203ENST00000409545 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
C2orf88-203ENST00000409545 PHF14O94880 888 aa12.67□□□□□ -0.38
C2orf88-203ENST00000409545 PSEN2P49810 448 aa12.66□□□□□ -0.38
C2orf88-203ENST00000409545 ADAM33Q9BZ11 813 aa12.66□□□□□ -0.38
C2orf88-203ENST00000409545 GRXCR2A6NFK2 248 aa12.64□□□□□ -0.39
C2orf88-203ENST00000409545 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
C2orf88-203ENST00000409545 ANKRD13DQ6ZTN6 518 aa12.64□□□□□ -0.39
C2orf88-203ENST00000409545 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
C2orf88-203ENST00000409545 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
C2orf88-203ENST00000409545 LSM11P83369 360 aaKnown RBP eCLIP12.63□□□□□ -0.39
C2orf88-203ENST00000409545 EPAS1Q99814 870 aa12.63□□□□□ -0.39
C2orf88-203ENST00000409545 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
C2orf88-203ENST00000409545 PTPREP23469 700 aa12.61□□□□□ -0.39
C2orf88-203ENST00000409545 NBR1Q14596 966 aa12.61□□□□□ -0.39
C2orf88-203ENST00000409545 FBXW7Q969H0 707 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms